Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1955
Experiment: MoLS4 without Pantothenic with Casamino acids (vit. assay) 0.05%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoLS4 without Pantothenic with Casamino acids (vit. assay) 0.05% |
---|---|---|---|---|---|
remove | |||||
2,027,237 | + | proA | DVU1953 | 0.80 | +0.4 |
2,027,385 | + | +0.6 | |||
2,028,181 | + | -0.1 | |||
2,028,387 | - | DVU1955 | 0.21 | +0.2 | |
2,028,447 | + | DVU1955 | 0.28 | -0.4 | |
2,028,561 | - | DVU1955 | 0.42 | -0.5 | |
2,028,644 | - | DVU1955 | 0.52 | -0.7 | |
2,028,686 | + | DVU1955 | 0.57 | -0.1 | |
2,028,716 | + | DVU1955 | 0.60 | +0.0 | |
2,028,833 | - | DVU1955 | 0.74 | +0.7 | |
2,028,855 | + | DVU1955 | 0.77 | +0.0 | |
2,028,860 | + | DVU1955 | 0.78 | +0.1 | |
2,028,863 | - | DVU1955 | 0.78 | +0.0 | |
2,028,863 | - | DVU1955 | 0.78 | +0.1 | |
2,028,863 | - | DVU1955 | 0.78 | -0.0 | |
2,028,890 | + | DVU1955 | 0.81 | +1.0 | |
2,028,898 | - | DVU1955 | 0.82 | +0.3 | |
2,028,898 | - | DVU1955 | 0.82 | -0.5 | |
2,028,898 | - | DVU1955 | 0.82 | +0.3 | |
2,028,902 | + | DVU1955 | 0.83 | +0.2 | |
2,028,922 | + | DVU1955 | 0.85 | -1.0 | |
2,029,173 | + | -1.7 | |||
2,029,181 | - | -0.4 | |||
2,029,260 | - | +0.5 |
Or see this region's nucleotide sequence