Experiment: MoLS4 without Pantothenic with Casamino acids (vit. assay) 0.05%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt lon and DVU1338 are separated by 162 nucleotides DVU1338 and DORF10632 are separated by 8 nucleotides DORF10632 and DVU1339 are separated by 4 nucleotides
DVU1337: lon - ATP-dependent protease La (TIGR), at 1,413,261 to 1,415,726
lon
DVU1338: DVU1338 - conserved hypothetical protein (TIGR), at 1,415,889 to 1,416,473
DVU1338
DORF10632: DORF10632 - SEED: FIG00602944: hypothetical protein, at 1,416,482 to 1,416,769
DORF10632
DVU1339: DVU1339 - lipoprotein, putative (TIGR), at 1,416,774 to 1,417,604
DVU1339
Position (kb)
1415
1416
1417 Strain fitness (log2 ratio)
-2
-1
0
1 at 1414.973 kb on + strand, within lon at 1415.359 kb on + strand, within lon at 1415.415 kb on + strand, within lon at 1415.482 kb on + strand at 1415.562 kb on + strand at 1415.562 kb on + strand at 1415.686 kb on - strand at 1415.701 kb on - strand at 1415.940 kb on - strand at 1416.080 kb on + strand, within DVU1338 at 1416.249 kb on - strand, within DVU1338 at 1416.372 kb on - strand, within DVU1338 at 1416.372 kb on - strand, within DVU1338 at 1416.475 kb on - strand at 1416.575 kb on + strand, within DORF10632 at 1416.583 kb on - strand, within DORF10632 at 1416.646 kb on - strand, within DORF10632 at 1416.659 kb on + strand, within DORF10632 at 1416.769 kb on - strand at 1416.817 kb on - strand at 1416.945 kb on + strand, within DVU1339 at 1416.947 kb on + strand, within DVU1339 at 1416.955 kb on - strand, within DVU1339 at 1417.001 kb on + strand, within DVU1339 at 1417.040 kb on - strand, within DVU1339 at 1417.056 kb on + strand, within DVU1339 at 1417.057 kb on + strand, within DVU1339 at 1417.259 kb on - strand, within DVU1339 at 1417.315 kb on - strand, within DVU1339 at 1417.315 kb on - strand, within DVU1339 at 1417.386 kb on + strand, within DVU1339 at 1417.431 kb on - strand, within DVU1339 at 1417.452 kb on + strand, within DVU1339
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 without Pantothenic with Casamino acids (vit. assay) 0.05% remove 1,414,973 + lon DVU1337 0.69 -0.3 1,415,359 + lon DVU1337 0.85 +1.2 1,415,415 + lon DVU1337 0.87 +0.4 1,415,482 + -0.0 1,415,562 + -0.8 1,415,562 + -2.1 1,415,686 - -0.5 1,415,701 - -0.4 1,415,940 - +0.1 1,416,080 + DVU1338 0.33 +0.3 1,416,249 - DVU1338 0.62 -0.3 1,416,372 - DVU1338 0.83 +0.3 1,416,372 - DVU1338 0.83 -0.2 1,416,475 - -0.3 1,416,575 + DORF10632 0.32 +0.1 1,416,583 - DORF10632 0.35 -0.7 1,416,646 - DORF10632 0.57 -0.6 1,416,659 + DORF10632 0.61 +0.4 1,416,769 - -0.9 1,416,817 - -1.4 1,416,945 + DVU1339 0.21 +0.2 1,416,947 + DVU1339 0.21 -0.4 1,416,955 - DVU1339 0.22 +0.3 1,417,001 + DVU1339 0.27 -1.0 1,417,040 - DVU1339 0.32 -0.1 1,417,056 + DVU1339 0.34 -0.6 1,417,057 + DVU1339 0.34 -0.2 1,417,259 - DVU1339 0.58 -2.2 1,417,315 - DVU1339 0.65 +0.1 1,417,315 - DVU1339 0.65 -1.3 1,417,386 + DVU1339 0.74 -1.0 1,417,431 - DVU1339 0.79 -0.2 1,417,452 + DVU1339 0.82 -1.2
Or see this region's nucleotide sequence