Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU3049

Experiment: MoLS4 without Pyridoxine Hydrochloride with Casaminos (vit. assay) 0.05%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoLS4 without Pyridoxine Hydrochloride with Casaminos (vit. assay) 0.05%
3,175,267	-				+0.6
3,175,274	-				-0.7
3,175,336	-				+0.0
3,175,389	+		DVU3049	0.20	+0.7
3,175,389	-		DVU3049	0.20	-0.7
3,175,431	+		DVU3049	0.30	+0.6
3,175,522	+		DVU3049	0.52	+0.5
3,175,522	+		DVU3049	0.52	+0.4
3,175,530	-		DVU3049	0.54	-0.2
3,175,619	-		DVU3049	0.76	+0.4
3,175,744	+				-0.2
3,175,794	-				+0.5
3,175,794	-				+0.8
3,175,831	+				+0.3
3,175,839	-				+0.7
3,175,899	-		DVU3050	0.13	+3.1
3,175,924	-		DVU3050	0.19	-0.1
3,175,980	-		DVU3050	0.32	-0.3
3,175,995	-		DVU3050	0.35	-0.2
3,176,234	-				-1.9
3,176,425	-				-0.2
3,176,459	-				+0.4
3,176,466	-				-0.3
3,176,494	-				-0.0
3,176,588	+	mutT	DVU3051	0.23	-0.5
3,176,596	-	mutT	DVU3051	0.25	-0.3
3,176,617	+	mutT	DVU3051	0.31	+0.5
3,176,713	+	mutT	DVU3051	0.55	-0.3