Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2098

Experiment: MoLS4 without Pyridoxine Hydrochloride with Casaminos (vit. assay) 0.05%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoLS4 without Pyridoxine Hydrochloride with Casaminos (vit. assay) 0.05%
2,185,302	+				+0.4
2,185,332	-				-0.1
2,185,333	-				+0.4
2,185,342	-				-0.4
2,185,749	-		DVU2097	0.61	-0.1
2,185,774	-		DVU2097	0.65	+1.2
2,185,898	+		DVU2097	0.84	-0.0
2,186,023	+				-0.2
2,186,049	+				-0.3
2,186,049	+				-0.7
2,186,223	+				-1.5
2,186,260	+				+0.0
2,186,264	-				-0.3
2,186,384	-				-0.4
2,186,384	-				-0.7
2,186,632	-	cooS	DVU2098	0.18	-1.0
2,186,726	+	cooS	DVU2098	0.23	-0.1
2,186,745	+	cooS	DVU2098	0.24	-0.2
2,186,828	+	cooS	DVU2098	0.28	-0.3
2,186,836	-	cooS	DVU2098	0.29	-1.6
2,186,848	-	cooS	DVU2098	0.29	-0.2
2,186,899	+	cooS	DVU2098	0.32	+0.6
2,186,899	+	cooS	DVU2098	0.32	+1.2
2,186,899	+	cooS	DVU2098	0.32	-0.4
2,186,907	-	cooS	DVU2098	0.32	-0.1
2,187,033	+	cooS	DVU2098	0.39	-1.2
2,187,036	-	cooS	DVU2098	0.39	-0.5
2,187,065	-	cooS	DVU2098	0.41	+0.8
2,187,136	-	cooS	DVU2098	0.44	+0.4
2,187,175	+	cooS	DVU2098	0.47	+0.2
2,187,185	-	cooS	DVU2098	0.47	-0.4
2,187,198	+	cooS	DVU2098	0.48	-0.1
2,187,214	-	cooS	DVU2098	0.49	-2.8
2,187,278	+	cooS	DVU2098	0.52	+0.5
2,187,288	-	cooS	DVU2098	0.52	-2.7
2,187,306	-	cooS	DVU2098	0.53	-0.3
2,187,320	+	cooS	DVU2098	0.54	-0.4
2,187,477	-	cooS	DVU2098	0.62	-0.7
2,187,487	-	cooS	DVU2098	0.63	-0.8
2,187,546	+	cooS	DVU2098	0.66	+0.2
2,187,559	+	cooS	DVU2098	0.67	+0.0
2,187,683	+	cooS	DVU2098	0.73	-0.4
2,187,815	+	cooS	DVU2098	0.80	-0.1
2,187,861	-	cooS	DVU2098	0.83	-0.5
2,187,871	+	cooS	DVU2098	0.83	-1.2
2,187,871	+	cooS	DVU2098	0.83	-0.2
2,187,877	-	cooS	DVU2098	0.84	-0.1
2,187,984	-	cooS	DVU2098	0.89	-0.1
2,188,055	+				-1.4
2,188,060	+				-0.2
2,188,070	+				-0.8
2,188,116	+				-0.4
2,188,129	+				+0.2
2,188,259	+				-0.8
2,188,358	+				-0.4
2,188,585	+	cooC-2	DVU2099	0.36	-0.0
2,188,658	-	cooC-2	DVU2099	0.44	-0.5
2,188,831	+	cooC-2	DVU2099	0.64	-0.5
2,188,839	-	cooC-2	DVU2099	0.65	-0.4
2,188,839	-	cooC-2	DVU2099	0.65	-0.1
2,188,839	-	cooC-2	DVU2099	0.65	+0.0
2,189,125	-				-0.4