Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU0087
Experiment: MoLS4 without Pyridoxine Hydrochloride with Casaminos (vit. assay) 0.05%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoLS4 without Pyridoxine Hydrochloride with Casaminos (vit. assay) 0.05% |
---|---|---|---|---|---|
remove | |||||
111,502 | + | +0.2 | |||
111,508 | - | -0.5 | |||
111,508 | - | -0.3 | |||
111,510 | - | -0.2 | |||
111,513 | + | +0.7 | |||
111,632 | + | +0.5 | |||
111,687 | + | -0.3 | |||
111,729 | + | +0.1 | |||
111,803 | + | -0.1 | |||
111,819 | + | -1.3 | |||
111,860 | + | -0.6 | |||
111,938 | - | -2.3 | |||
111,952 | - | DVU0087 | 0.10 | -1.3 | |
111,965 | + | DVU0087 | 0.13 | -1.4 | |
112,013 | + | DVU0087 | 0.22 | -1.9 | |
112,146 | - | DVU0087 | 0.49 | -0.9 | |
112,241 | - | DVU0087 | 0.68 | -0.7 | |
112,356 | + | -0.3 | |||
112,404 | + | +0.0 | |||
112,412 | - | -1.1 | |||
112,451 | + | +0.4 | |||
112,513 | + | +0.7 | |||
112,515 | + | -0.8 | |||
112,515 | + | -0.7 | |||
112,744 | - | DVU0088 | 0.24 | -2.5 | |
112,857 | + | DVU0088 | 0.31 | -0.7 | |
112,964 | + | DVU0088 | 0.38 | -0.8 | |
113,046 | + | DVU0088 | 0.44 | +0.1 | |
113,058 | + | DVU0088 | 0.45 | +1.2 | |
113,162 | - | DVU0088 | 0.52 | -0.1 | |
113,177 | - | DVU0088 | 0.53 | -0.9 | |
113,177 | - | DVU0088 | 0.53 | -1.0 | |
113,285 | + | DVU0088 | 0.60 | -0.7 | |
113,345 | + | DVU0088 | 0.64 | -1.6 | |
113,353 | - | DVU0088 | 0.65 | -1.7 |
Or see this region's nucleotide sequence