Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2811

Experiment: MoLS4 without Pyridoxine Hydrochloride with Casaminos (vit. assay) 0.05%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoLS4 without Pyridoxine Hydrochloride with Casaminos (vit. assay) 0.05%
2,912,852	-				-0.3
2,912,877	+				-0.4
2,912,902	+				-0.9
2,912,912	+				-0.0
2,912,917	+		DVU2810	0.10	+0.2
2,912,925	-		DVU2810	0.11	+0.1
2,912,944	+		DVU2810	0.13	-1.5
2,912,944	+		DVU2810	0.13	+0.2
2,912,982	-		DVU2810	0.17	+0.3
2,912,982	-		DVU2810	0.17	+0.3
2,913,080	+		DVU2810	0.27	-0.2
2,913,080	+		DVU2810	0.27	-0.3
2,913,102	+		DVU2810	0.30	-0.4
2,913,168	-		DVU2810	0.36	+0.2
2,913,292	+		DVU2810	0.50	+0.1
2,913,350	+		DVU2810	0.56	-0.1
2,913,358	-		DVU2810	0.57	+2.1
2,913,514	-		DVU2810	0.73	-0.1
2,913,530	-		DVU2810	0.75	-0.8
2,913,553	-		DVU2810	0.77	-0.1
2,913,558	+		DVU2810	0.78	-0.2
2,913,611	+		DVU2810	0.83	+0.1
2,913,611	+		DVU2810	0.83	+0.1
2,913,619	-		DVU2810	0.84	-0.2
2,913,619	-		DVU2810	0.84	-0.6
2,913,619	-		DVU2810	0.84	-0.2
2,913,633	+		DVU2810	0.86	+0.1
2,913,643	+		DVU2810	0.87	+0.0
2,913,659	-		DVU2810	0.88	+0.3
2,913,685	-				-0.4
2,913,799	-				-0.1
2,913,909	-		DVU2811	0.10	-0.2
2,914,130	-		DVU2811	0.43	-1.8
2,914,147	+		DVU2811	0.46	+0.5
2,914,155	-		DVU2811	0.47	+0.1
2,914,294	-		DVU2811	0.68	-0.0
2,914,365	+		DVU2811	0.79	+1.5
2,914,552	+				-0.1
2,914,646	+				-0.1
2,914,695	+				+0.1
2,914,731	-				+0.2
2,914,736	-				-1.2
2,914,757	-				-0.3
2,914,844	+				-0.1
2,914,937	+	fdnG-3	DVU2812	0.13	+0.2
2,915,031	-	fdnG-3	DVU2812	0.16	-0.5
2,915,124	-	fdnG-3	DVU2812	0.19	+0.2
2,915,124	-	fdnG-3	DVU2812	0.19	-0.1
2,915,124	-	fdnG-3	DVU2812	0.19	-0.5
2,915,197	-	fdnG-3	DVU2812	0.21	-0.6
2,915,292	+	fdnG-3	DVU2812	0.24	+0.9
2,915,292	+	fdnG-3	DVU2812	0.24	+0.0
2,915,298	-	fdnG-3	DVU2812	0.24	-0.1
2,915,300	-	fdnG-3	DVU2812	0.25	-0.2
2,915,322	+	fdnG-3	DVU2812	0.25	+0.1
2,915,353	-	fdnG-3	DVU2812	0.26	-0.1
2,915,388	-	fdnG-3	DVU2812	0.27	-0.3
2,915,434	-	fdnG-3	DVU2812	0.29	-0.2
2,915,444	-	fdnG-3	DVU2812	0.29	-0.2
2,915,457	-	fdnG-3	DVU2812	0.30	-0.5