Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1479

Experiment: MoLS4 without Pyridoxine Hydrochloride with Casaminos (vit. assay) 0.05%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoLS4 without Pyridoxine Hydrochloride with Casaminos (vit. assay) 0.05%
1,557,666	+		DVU1477	0.89	-0.1
1,557,669	+		DVU1477	0.90	-0.1
1,557,757	-				+0.6
1,557,790	-				-1.6
1,557,790	-				-0.1
1,558,480	+		DVU1478	0.72	+0.7
1,558,641	+				+0.9
1,559,070	+		DVU1479	0.40	-2.7
1,559,144	-		DVU1479	0.48	-0.8
1,559,761	+		DVU1480	0.14	-0.1
1,559,798	+		DVU1480	0.24	-0.2
1,559,808	+		DVU1480	0.27	-0.5
1,559,874	-		DVU1480	0.45	-0.4
1,559,910	-		DVU1480	0.55	+0.2
1,559,957	-		DVU1480	0.68	+1.2
1,560,015	+		DVU1480	0.84	-1.1
1,560,043	-				+2.2
1,560,043	-				-0.5
1,560,045	-				-1.2
1,560,248	-		DVU1481	0.24	+0.0
1,560,295	+		DVU1481	0.33	+3.3
1,560,295	+		DVU1481	0.33	-0.4
1,560,295	+		DVU1481	0.33	-0.0
1,560,295	+		DVU1481	0.33	-0.1
1,560,295	+		DVU1481	0.33	+0.3
1,560,298	-		DVU1481	0.34	-0.1
1,560,303	-		DVU1481	0.35	+0.1
1,560,303	-		DVU1481	0.35	-0.2
1,560,303	-		DVU1481	0.35	-0.6
1,560,303	-		DVU1481	0.35	-0.1
1,560,343	-		DVU1481	0.43	-0.1
1,560,370	-		DVU1481	0.48	-0.2
1,560,411	-		DVU1481	0.56	-0.5
1,560,441	+		DVU1481	0.62	+0.2
1,560,449	-		DVU1481	0.64	-1.2
1,560,459	+		DVU1481	0.66	+0.1
1,560,465	+		DVU1481	0.67	+0.7
1,560,482	+		DVU1481	0.70	-0.3
1,560,482	+		DVU1481	0.70	-1.1
1,560,482	+		DVU1481	0.70	-0.0
1,560,490	-		DVU1481	0.72	-0.1
1,560,490	-		DVU1481	0.72	-0.4
1,560,490	-		DVU1481	0.72	-0.2
1,560,590	+				+0.4
1,560,607	+				+0.1
1,560,610	-				-0.4
1,560,610	-				-0.3
1,560,640	+				+1.4
1,560,670	-				-0.8