Experiment: MoLS4 without Pyridoxine Hydrochloride with Casaminos (vit. assay) 0.05%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt aor-2 and DVU0688 are separated by 0 nucleotides DVU0688 and rnhA are separated by 9 nucleotides rnhA and DORF29743 are separated by 166 nucleotides DORF29743 and DVU0690 are separated by 75 nucleotides
DVU0687: aor-2 - aldehyde:ferredoxin oxidoreductase, tungsten-containing, putative (TIGR), at 761,222 to 763,006
aor-2
DVU0688: DVU0688 - hypothetical protein (TIGR), at 763,007 to 763,507
DVU0688
DVU0689: rnhA - ribonuclease HI (TIGR), at 763,517 to 763,987
rnhA
DORF29743: DORF29743 - no description, at 764,154 to 764,273
DORF29743
DVU0690: DVU0690 - conserved hypothetical protein (TIGR), at 764,349 to 765,020
DVU0690
Position (kb) 763
764 Strain fitness (log2 ratio) -2
-1
0
1
2 at 762.070 kb on - strand, within aor-2 at 762.222 kb on + strand, within aor-2 at 762.222 kb on + strand, within aor-2 at 762.246 kb on - strand, within aor-2 at 762.295 kb on + strand, within aor-2 at 762.295 kb on - strand, within aor-2 at 762.314 kb on + strand, within aor-2 at 762.327 kb on - strand, within aor-2 at 762.424 kb on - strand, within aor-2 at 762.460 kb on + strand, within aor-2 at 762.468 kb on - strand, within aor-2 at 762.487 kb on + strand, within aor-2 at 762.495 kb on - strand, within aor-2 at 762.511 kb on - strand, within aor-2 at 762.588 kb on - strand, within aor-2 at 762.593 kb on + strand, within aor-2 at 762.634 kb on + strand, within aor-2 at 762.634 kb on + strand, within aor-2 at 762.637 kb on - strand, within aor-2 at 762.642 kb on - strand, within aor-2 at 762.646 kb on + strand, within aor-2 at 762.646 kb on + strand, within aor-2 at 762.646 kb on + strand, within aor-2 at 762.646 kb on + strand, within aor-2 at 762.646 kb on + strand, within aor-2 at 762.654 kb on - strand, within aor-2 at 762.758 kb on + strand, within aor-2 at 762.789 kb on + strand, within aor-2 at 762.952 kb on + strand at 762.960 kb on - strand at 762.990 kb on - strand at 763.001 kb on + strand at 763.017 kb on + strand at 763.025 kb on - strand at 763.025 kb on - strand at 763.036 kb on - strand at 763.038 kb on - strand at 763.075 kb on + strand, within DVU0688 at 763.080 kb on + strand, within DVU0688 at 763.080 kb on + strand, within DVU0688 at 763.083 kb on - strand, within DVU0688 at 763.088 kb on - strand, within DVU0688 at 763.088 kb on - strand, within DVU0688 at 763.104 kb on - strand, within DVU0688 at 763.126 kb on + strand, within DVU0688 at 763.140 kb on - strand, within DVU0688 at 763.319 kb on - strand, within DVU0688 at 763.374 kb on - strand, within DVU0688 at 763.417 kb on - strand, within DVU0688 at 763.530 kb on + strand at 763.727 kb on + strand, within rnhA at 763.786 kb on - strand, within rnhA at 764.084 kb on + strand at 764.087 kb on - strand at 764.168 kb on + strand, within DORF29743 at 764.230 kb on - strand, within DORF29743 at 764.347 kb on + strand at 764.351 kb on + strand at 764.396 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 without Pyridoxine Hydrochloride with Casaminos (vit. assay) 0.05% remove 762,070 - aor-2 DVU0687 0.48 -0.6 762,222 + aor-2 DVU0687 0.56 -0.7 762,222 + aor-2 DVU0687 0.56 -0.4 762,246 - aor-2 DVU0687 0.57 +0.6 762,295 + aor-2 DVU0687 0.60 -2.0 762,295 - aor-2 DVU0687 0.60 +0.4 762,314 + aor-2 DVU0687 0.61 -0.2 762,327 - aor-2 DVU0687 0.62 -0.6 762,424 - aor-2 DVU0687 0.67 -0.4 762,460 + aor-2 DVU0687 0.69 +1.7 762,468 - aor-2 DVU0687 0.70 +0.0 762,487 + aor-2 DVU0687 0.71 -1.5 762,495 - aor-2 DVU0687 0.71 -0.3 762,511 - aor-2 DVU0687 0.72 +0.0 762,588 - aor-2 DVU0687 0.77 +0.6 762,593 + aor-2 DVU0687 0.77 +0.6 762,634 + aor-2 DVU0687 0.79 -0.3 762,634 + aor-2 DVU0687 0.79 +2.2 762,637 - aor-2 DVU0687 0.79 -0.5 762,642 - aor-2 DVU0687 0.80 -0.5 762,646 + aor-2 DVU0687 0.80 -0.0 762,646 + aor-2 DVU0687 0.80 -0.6 762,646 + aor-2 DVU0687 0.80 -0.3 762,646 + aor-2 DVU0687 0.80 +0.6 762,646 + aor-2 DVU0687 0.80 -0.4 762,654 - aor-2 DVU0687 0.80 -1.3 762,758 + aor-2 DVU0687 0.86 -0.3 762,789 + aor-2 DVU0687 0.88 +0.2 762,952 + +0.3 762,960 - +0.3 762,990 - -0.0 763,001 + -0.1 763,017 + +0.0 763,025 - -1.8 763,025 - -0.1 763,036 - +0.7 763,038 - +0.3 763,075 + DVU0688 0.14 +1.2 763,080 + DVU0688 0.15 +1.0 763,080 + DVU0688 0.15 -0.3 763,083 - DVU0688 0.15 +0.5 763,088 - DVU0688 0.16 +1.6 763,088 - DVU0688 0.16 -1.5 763,104 - DVU0688 0.19 +0.3 763,126 + DVU0688 0.24 +0.7 763,140 - DVU0688 0.27 -0.2 763,319 - DVU0688 0.62 +0.0 763,374 - DVU0688 0.73 +0.2 763,417 - DVU0688 0.82 +0.2 763,530 + -0.0 763,727 + rnhA DVU0689 0.45 -0.3 763,786 - rnhA DVU0689 0.57 -2.2 764,084 + -0.5 764,087 - -0.6 764,168 + DORF29743 0.12 -0.5 764,230 - DORF29743 0.63 -0.0 764,347 + +0.3 764,351 + +0.8 764,396 - +0.5
Or see this region's nucleotide sequence