Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4184

Experiment: No vitamins t1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	No vitamins t1
4,867,006	-				-0.0
4,867,006	-				+0.6
4,867,006	-				+0.1
4,867,006	-				-0.6
4,867,053	+				-0.4
4,867,053	+				+0.6
4,867,131	+		Pf6N2E2_4183	0.10	-0.3
4,867,132	-		Pf6N2E2_4183	0.10	+0.2
4,867,132	-		Pf6N2E2_4183	0.10	+0.8
4,867,132	-		Pf6N2E2_4183	0.10	+0.9
4,867,132	-		Pf6N2E2_4183	0.10	+0.5
4,867,132	-		Pf6N2E2_4183	0.10	-1.7
4,867,132	-		Pf6N2E2_4183	0.10	-1.7
4,867,505	+		Pf6N2E2_4183	0.57	-1.2
4,867,505	+		Pf6N2E2_4183	0.57	+0.3
4,867,505	+		Pf6N2E2_4183	0.57	+2.2
4,867,505	+		Pf6N2E2_4183	0.57	-0.7
4,867,505	+		Pf6N2E2_4183	0.57	-0.4
4,867,505	+		Pf6N2E2_4183	0.57	-0.4
4,867,505	+		Pf6N2E2_4183	0.57	-0.3
4,867,505	+		Pf6N2E2_4183	0.57	-1.2
4,867,505	+		Pf6N2E2_4183	0.57	+0.2
4,867,505	+		Pf6N2E2_4183	0.57	+0.3
4,867,505	+		Pf6N2E2_4183	0.57	-0.4
4,867,506	-		Pf6N2E2_4183	0.58	-1.2
4,867,506	-		Pf6N2E2_4183	0.58	-2.8
4,867,506	-		Pf6N2E2_4183	0.58	-0.7
4,867,506	-		Pf6N2E2_4183	0.58	-0.1
4,867,506	-		Pf6N2E2_4183	0.58	+0.7
4,867,506	-		Pf6N2E2_4183	0.58	-0.1
4,867,506	-		Pf6N2E2_4183	0.58	-0.4
4,867,506	-		Pf6N2E2_4183	0.58	+1.3
4,867,609	-		Pf6N2E2_4183	0.71	-0.5
4,867,609	-		Pf6N2E2_4183	0.71	-0.3
4,867,609	-		Pf6N2E2_4183	0.71	+1.6
4,867,859	-				+0.2
4,867,880	+				-1.4
4,867,881	-				-0.4
4,867,881	-				-0.4
4,867,881	-				+0.6
4,867,897	+				-1.0
4,867,898	-				-0.7
4,867,957	-				-0.3
4,868,034	+				+0.2
4,868,050	+		Pf6N2E2_4184	0.12	-1.0
4,868,051	-		Pf6N2E2_4184	0.13	-1.6
4,868,151	+		Pf6N2E2_4184	0.41	-0.1
4,868,151	+		Pf6N2E2_4184	0.41	-0.4
4,868,151	+		Pf6N2E2_4184	0.41	+0.2
4,868,151	+		Pf6N2E2_4184	0.41	-0.1
4,868,152	-		Pf6N2E2_4184	0.41	+0.8
4,868,152	-		Pf6N2E2_4184	0.41	+0.6
4,868,152	-		Pf6N2E2_4184	0.41	-0.4
4,868,152	-		Pf6N2E2_4184	0.41	+0.0
4,868,152	-		Pf6N2E2_4184	0.41	+0.6
4,868,235	+		Pf6N2E2_4184	0.65	-0.3
4,868,235	+		Pf6N2E2_4184	0.65	-1.4
4,868,235	+		Pf6N2E2_4184	0.65	-0.1
4,868,236	-		Pf6N2E2_4184	0.65	-0.8
4,868,236	-		Pf6N2E2_4184	0.65	+0.3
4,868,236	-		Pf6N2E2_4184	0.65	-1.0
4,868,236	-		Pf6N2E2_4184	0.65	-1.5
4,868,236	-		Pf6N2E2_4184	0.65	-0.8
4,868,236	-		Pf6N2E2_4184	0.65	-0.5
4,868,247	+		Pf6N2E2_4184	0.68	+0.2
4,868,280	+		Pf6N2E2_4184	0.77	-0.1
4,868,280	+		Pf6N2E2_4184	0.77	-0.4
4,868,280	+		Pf6N2E2_4184	0.77	-1.8
4,868,280	+		Pf6N2E2_4184	0.77	-0.0
4,868,280	+		Pf6N2E2_4184	0.77	+0.6
4,868,280	+		Pf6N2E2_4184	0.77	+0.7
4,868,280	+		Pf6N2E2_4184	0.77	-1.4
4,868,280	+		Pf6N2E2_4184	0.77	-1.4
4,868,280	+		Pf6N2E2_4184	0.77	-1.4
4,868,280	+		Pf6N2E2_4184	0.77	-0.2
4,868,280	+		Pf6N2E2_4184	0.77	+0.1
4,868,281	-		Pf6N2E2_4184	0.78	+1.0
4,868,281	-		Pf6N2E2_4184	0.78	+0.9
4,868,281	-		Pf6N2E2_4184	0.78	-0.4
4,868,281	-		Pf6N2E2_4184	0.78	-1.8
4,868,281	-		Pf6N2E2_4184	0.78	+0.1
4,868,281	-		Pf6N2E2_4184	0.78	-0.4
4,868,281	-		Pf6N2E2_4184	0.78	-1.2
4,868,281	-		Pf6N2E2_4184	0.78	+0.6
4,868,281	-		Pf6N2E2_4184	0.78	-0.9
4,868,281	-		Pf6N2E2_4184	0.78	-0.6
4,868,281	-		Pf6N2E2_4184	0.78	-0.4
4,868,281	-		Pf6N2E2_4184	0.78	-0.6
4,868,344	+				-1.0
4,868,345	-				-2.2
4,868,386	+				-0.3
4,868,386	+				-1.3
4,868,397	-				-0.7
4,868,397	-				-0.0
4,868,467	+				+0.4
4,868,467	+				-1.0
4,868,467	+				-0.1
4,868,467	+				+1.6
4,868,467	+				-0.2
4,868,467	+				+0.1
4,868,467	+				-0.4
4,868,467	+				-0.3
4,868,467	+				-1.1
4,868,467	+				-0.1
4,868,467	+				-0.7
4,868,467	+				+1.6
4,868,467	+				-0.5
4,868,468	-				-0.0
4,868,468	-				-1.6
4,868,468	-				+1.3
4,868,468	-				+1.3
4,868,468	-				-1.0
4,868,468	-				+0.8
4,868,468	-				+0.3
4,868,468	-				-0.3
4,868,468	-				-0.7
4,868,468	-				-0.4
4,868,489	+				+1.2
4,868,489	+				-1.4
4,868,499	+				+0.6
4,868,499	+				-2.0
4,868,500	-				-0.0
4,868,536	+				+0.2
4,868,537	-				-3.3
4,868,537	-				-0.8
4,868,537	-				+0.1
4,868,537	-				+0.6
4,868,543	+				-0.0
4,868,543	+				-0.4
4,868,544	-				-0.0
4,868,553	+				-0.2
4,868,553	+				-0.5
4,868,554	-				-0.2
4,868,554	-				+1.6
4,868,742	+		Pf6N2E2_4185	0.13	+1.0
4,868,742	+		Pf6N2E2_4185	0.13	-0.1
4,868,742	+		Pf6N2E2_4185	0.13	-0.4
4,868,747	+		Pf6N2E2_4185	0.14	+0.8
4,868,747	+		Pf6N2E2_4185	0.14	-0.4
4,868,748	-		Pf6N2E2_4185	0.14	-1.0
4,868,748	-		Pf6N2E2_4185	0.14	-1.0
4,868,748	-		Pf6N2E2_4185	0.14	-1.4
4,868,849	+		Pf6N2E2_4185	0.20	-0.2
4,868,849	+		Pf6N2E2_4185	0.20	+0.3
4,868,850	-		Pf6N2E2_4185	0.20	-0.0
4,868,859	+		Pf6N2E2_4185	0.21	-0.8
4,868,859	+		Pf6N2E2_4185	0.21	-1.0
4,868,859	+		Pf6N2E2_4185	0.21	+0.6
4,868,860	-		Pf6N2E2_4185	0.21	-1.1
4,868,907	+		Pf6N2E2_4185	0.24	+0.2
4,868,934	+		Pf6N2E2_4185	0.26	+0.0
4,869,027	+		Pf6N2E2_4185	0.32	+1.6
4,869,027	+		Pf6N2E2_4185	0.32	-0.2
4,869,027	+		Pf6N2E2_4185	0.32	-0.1
4,869,078	+		Pf6N2E2_4185	0.35	+0.6
4,869,078	+		Pf6N2E2_4185	0.35	-0.4
4,869,078	+		Pf6N2E2_4185	0.35	-1.0
4,869,078	+		Pf6N2E2_4185	0.35	+0.8
4,869,078	+		Pf6N2E2_4185	0.35	-0.6
4,869,079	-		Pf6N2E2_4185	0.35	-2.8
4,869,079	-		Pf6N2E2_4185	0.35	-0.1
4,869,079	-		Pf6N2E2_4185	0.35	+0.6
4,869,079	-		Pf6N2E2_4185	0.35	+0.7
4,869,079	-		Pf6N2E2_4185	0.35	-0.5
4,869,079	-		Pf6N2E2_4185	0.35	-1.0
4,869,079	-		Pf6N2E2_4185	0.35	-0.2
4,869,079	-		Pf6N2E2_4185	0.35	+1.4
4,869,079	-		Pf6N2E2_4185	0.35	-0.1
4,869,079	-		Pf6N2E2_4185	0.35	+1.3