Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2668

Experiment: No vitamins t1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	No vitamins t1
3,140,090	+				-1.1
3,140,090	+				-0.2
3,140,090	+				-1.7
3,140,091	-				+0.4
3,140,350	-		Pf6N2E2_2667	0.50	+0.3
3,140,351	+		Pf6N2E2_2667	0.50	-0.5
3,140,352	-		Pf6N2E2_2667	0.50	+0.4
3,140,352	-		Pf6N2E2_2667	0.50	-0.1
3,140,352	-		Pf6N2E2_2667	0.50	-0.3
3,140,352	-		Pf6N2E2_2667	0.50	-0.1
3,140,378	+		Pf6N2E2_2667	0.57	+1.4
3,140,378	+		Pf6N2E2_2667	0.57	-0.1
3,140,451	-		Pf6N2E2_2667	0.75	-0.1
3,140,451	-		Pf6N2E2_2667	0.75	-0.3
3,140,451	-		Pf6N2E2_2667	0.75	-1.1
3,140,462	+		Pf6N2E2_2667	0.78	-0.1
3,140,462	+		Pf6N2E2_2667	0.78	+1.5
3,140,476	-		Pf6N2E2_2667	0.82	-0.9
3,140,481	+		Pf6N2E2_2667	0.83	-0.1
3,140,481	+		Pf6N2E2_2667	0.83	+0.3
3,140,482	-		Pf6N2E2_2667	0.83	-1.7
3,140,535	+				+0.1
3,140,536	-				-0.1
3,140,536	-				-0.1
3,140,536	-				+0.2
3,140,537	+				-0.7
3,140,537	+				-0.9
3,140,537	+				-0.6
3,140,537	+				-1.2
3,140,537	+				+2.8
3,140,537	+				-0.1
3,140,537	+				-0.1
3,140,538	-				-0.1
3,140,538	-				-0.1
3,140,538	-				-0.1
3,140,538	-				+0.0
3,140,538	-				-0.5
3,140,538	-				-0.1
3,140,578	+				-0.1
3,140,578	+				+0.5
3,140,579	-				+1.7
3,140,579	-				-1.1
3,140,582	+				+0.1
3,140,582	+				-0.5
3,140,582	+				-0.6
3,140,582	+				+1.5
3,140,583	-				+1.7
3,140,583	-				-1.1
3,140,583	-				-0.3
3,140,583	-				-0.1
3,140,583	-				-0.4
3,140,641	+				-0.4
3,140,641	+				-1.5
3,140,641	+				-0.5
3,140,642	-				-0.8
3,140,642	-				+0.9
3,140,642	-				-1.7
3,140,642	-				-0.7
3,140,679	+				-1.1
3,140,680	-				-1.1
3,140,726	-				-0.6
3,140,726	-				-1.7
3,140,734	-				-0.1
3,140,740	+				+0.2
3,140,744	+				+0.9
3,140,744	+				-1.7
3,140,745	-				+2.2
3,140,745	-				-0.4
3,140,745	-				+0.4
3,140,799	+				-0.9
3,140,800	-				+0.4
3,141,068	+		Pf6N2E2_2668	0.30	+0.9
3,141,069	-		Pf6N2E2_2668	0.30	+0.3
3,141,069	-		Pf6N2E2_2668	0.30	-1.7
3,141,278	+		Pf6N2E2_2668	0.59	+0.3
3,141,279	-		Pf6N2E2_2668	0.59	-1.1
3,141,279	-		Pf6N2E2_2668	0.59	+0.6
3,141,279	-		Pf6N2E2_2668	0.59	+1.1
3,141,332	+		Pf6N2E2_2668	0.66	-1.1
3,141,332	+		Pf6N2E2_2668	0.66	-1.1
3,141,333	-		Pf6N2E2_2668	0.67	-0.1
3,141,333	-		Pf6N2E2_2668	0.67	+1.9
3,141,339	-		Pf6N2E2_2668	0.67	+0.3
3,141,389	+		Pf6N2E2_2668	0.74	-0.1
3,141,422	+		Pf6N2E2_2668	0.79	-0.5
3,141,423	-		Pf6N2E2_2668	0.79	-0.7
3,141,423	-		Pf6N2E2_2668	0.79	-1.1
3,141,423	-		Pf6N2E2_2668	0.79	+0.1
3,141,423	-		Pf6N2E2_2668	0.79	+0.9
3,141,423	-		Pf6N2E2_2668	0.79	-0.7
3,141,432	-		Pf6N2E2_2668	0.80	+0.3
3,141,464	+		Pf6N2E2_2668	0.84	+1.8
3,141,464	+		Pf6N2E2_2668	0.84	+1.4
3,141,464	+		Pf6N2E2_2668	0.84	+0.1
3,141,464	+		Pf6N2E2_2668	0.84	-1.1
3,141,464	+		Pf6N2E2_2668	0.84	+0.5
3,141,464	+		Pf6N2E2_2668	0.84	+0.3
3,141,464	+		Pf6N2E2_2668	0.84	-0.4
3,141,464	+		Pf6N2E2_2668	0.84	+1.1
3,141,465	-		Pf6N2E2_2668	0.85	-0.9
3,141,465	-		Pf6N2E2_2668	0.85	-1.2
3,141,470	+		Pf6N2E2_2668	0.85	+0.1
3,141,470	+		Pf6N2E2_2668	0.85	+0.5
3,141,470	+		Pf6N2E2_2668	0.85	-0.1
3,141,470	+		Pf6N2E2_2668	0.85	+0.3
3,141,470	+		Pf6N2E2_2668	0.85	-1.3
3,141,471	-		Pf6N2E2_2668	0.85	+0.5
3,141,535	+				-0.8
3,141,535	+				+0.2
3,141,539	+				-0.3
3,141,540	-				-0.3
3,141,540	-				+1.2
3,141,710	+				+0.0
3,141,759	+				-2.1
3,141,760	-				-0.1
3,141,760	-				-0.1
3,141,760	-				-2.1
3,141,760	-				-0.2
3,141,760	-				-0.1
3,141,760	-				-0.5
3,141,760	-				+0.9
3,141,760	-				+0.5
3,141,760	-				-0.4
3,141,761	+				+0.6
3,141,761	+				+0.9
3,141,762	-				-0.1
3,141,762	-				+0.4
3,141,762	-				+0.1
3,141,762	-				-0.7
3,141,841	-				-2.4
3,141,841	-				+0.4
3,141,850	+				-1.7
3,141,850	+				-0.6
3,141,850	+				-2.0
3,141,850	+				+1.5
3,141,850	+				+0.5
3,141,850	+				+0.5
3,141,850	+				-0.2
3,141,850	+				-0.1
3,141,850	+				+0.1
3,141,850	+				+1.5
3,141,850	+				+0.5
3,141,850	+				+0.6
3,141,851	-				+0.9
3,141,851	-				-0.4
3,141,851	-				-2.1
3,141,851	-				-1.1
3,141,877	-				-0.1
3,142,037	+				+0.5
3,142,044	-				+0.7
3,142,152	+				+0.7
3,142,152	+				+1.5
3,142,152	+				-2.1
3,142,152	+				+0.5
3,142,153	-				-0.4
3,142,153	-				-0.1
3,142,164	+				-0.1
3,142,186	+				+1.7
3,142,186	+				+2.7
3,142,186	+				+0.3
3,142,187	-				+0.5
3,142,187	-				-1.9
3,142,187	-				-0.1
3,142,187	-				+1.1
3,142,190	+				-1.1
3,142,190	+				-1.8
3,142,218	+				+0.1
3,142,224	-				-1.1
3,142,302	+		Pf6N2E2_2669	0.23	-0.7
3,142,303	-		Pf6N2E2_2669	0.24	-0.1
3,142,303	-		Pf6N2E2_2669	0.24	-0.1
3,142,303	-		Pf6N2E2_2669	0.24	-0.3
3,142,303	-		Pf6N2E2_2669	0.24	+0.6
3,142,329	-		Pf6N2E2_2669	0.32	-0.2
3,142,329	-		Pf6N2E2_2669	0.32	+0.1
3,142,337	+		Pf6N2E2_2669	0.35	+0.9
3,142,337	+		Pf6N2E2_2669	0.35	-1.3
3,142,338	-		Pf6N2E2_2669	0.35	+1.4
3,142,368	+		Pf6N2E2_2669	0.45	+0.9
3,142,368	+		Pf6N2E2_2669	0.45	-1.7
3,142,368	+		Pf6N2E2_2669	0.45	+2.4
3,142,369	-		Pf6N2E2_2669	0.46	-0.1
3,142,379	+		Pf6N2E2_2669	0.49	-0.1
3,142,379	+		Pf6N2E2_2669	0.49	-0.1
3,142,380	-		Pf6N2E2_2669	0.49	+0.9
3,142,403	-		Pf6N2E2_2669	0.57	-2.0
3,142,411	+		Pf6N2E2_2669	0.59	+1.1
3,142,411	+		Pf6N2E2_2669	0.59	-0.1
3,142,411	+		Pf6N2E2_2669	0.59	-0.8
3,142,412	-		Pf6N2E2_2669	0.60	-0.5
3,142,412	-		Pf6N2E2_2669	0.60	-0.3
3,142,418	-		Pf6N2E2_2669	0.62	+1.9
3,142,502	+		Pf6N2E2_2669	0.89	-0.1
3,142,502	+		Pf6N2E2_2669	0.89	+0.9
3,142,503	-				-1.1
3,142,503	-				-1.1
3,142,503	-				-0.4
3,142,503	-				+0.0