Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS28320

Experiment: malate (C) and Ammonium chloride (N); with MOPS; with PEG

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	malate (C) and Ammonium chloride (N); with MOPS; with PEG
6,307,443	+		PFLU_RS28310	0.17	-1.2
6,307,443	+		PFLU_RS28310	0.17	-1.2
6,307,701	+		PFLU_RS28310	0.88	-1.2
6,307,702	-		PFLU_RS28310	0.88	+0.2
6,307,757	+				-0.4
6,307,757	+				-0.6
6,307,757	+				+0.2
6,307,758	-				+0.4
6,307,758	-				+0.8
6,307,758	-				+0.2
6,307,758	-				+0.2
6,307,761	+				-2.2
6,307,761	+				+0.2
6,307,761	+				-0.5
6,307,761	+				+0.7
6,307,761	+				-0.2
6,307,761	+				+1.2
6,307,761	+				-0.6
6,307,761	+				+0.9
6,307,761	+				+0.9
6,307,761	+				-0.0
6,307,762	-				+0.3
6,307,762	-				+0.1
6,307,762	-				-0.6
6,307,762	-				-0.6
6,307,762	-				-0.4
6,307,762	-				-0.5
6,307,762	-				-0.1
6,307,762	-				-0.9
6,307,762	-				-0.2
6,307,762	-				+0.1
6,307,762	-				+1.3
6,307,762	-				-0.4
6,307,762	-				-0.6
6,307,806	+				+1.5
6,307,806	+				-0.7
6,307,806	+				-0.5
6,307,807	-				+0.0
6,307,807	-				-0.5
6,307,807	-				-0.1
6,307,828	+				-0.4
6,307,828	+				+0.2
6,307,828	+				-0.0
6,307,829	-				-0.9
6,307,829	-				-0.8
6,307,829	-				+0.5
6,307,829	-				-1.3
6,308,000	-		PFLU_RS28315	0.51	+0.2
6,308,136	-		PFLU_RS28315	0.85	-0.9
6,308,198	+				-1.4
6,308,198	+				-0.2
6,308,198	+				+1.6
6,308,199	-				+1.0
6,308,199	-				+0.8
6,308,240	+				-0.4
6,308,240	+				-0.9
6,308,240	+				+0.3
6,308,240	+				-0.5
6,308,240	+				+0.1
6,308,240	+				+0.3
6,308,240	+				+0.5
6,308,241	-				+0.5
6,308,241	-				+0.7
6,308,241	-				+1.4
6,308,241	-				-1.3
6,308,314	+				+0.0
6,308,314	+				+1.8
6,308,315	-				-0.0
6,308,315	-				-0.1
6,308,337	+				+0.2
6,308,337	+				-0.1
6,308,337	+				+0.6
6,308,337	+				+0.8
6,308,337	+				-0.5
6,308,338	-				-0.9
6,308,338	-				-0.8
6,308,406	+				+0.4
6,308,406	+				+0.1
6,308,407	-				+0.8
6,308,415	+				-0.2
6,308,415	+				-0.4
6,308,416	-				+0.2
6,308,416	-				+0.3
6,308,486	+				-0.4
6,308,488	+				-1.1
6,308,549	+		PFLU_RS28320	0.12	+0.8
6,308,549	+		PFLU_RS28320	0.12	+0.3
6,308,549	+		PFLU_RS28320	0.12	+0.3
6,308,549	+		PFLU_RS28320	0.12	+0.2
6,308,549	+		PFLU_RS28320	0.12	-1.1
6,308,549	+		PFLU_RS28320	0.12	+0.8
6,308,549	+		PFLU_RS28320	0.12	-0.6
6,308,549	+		PFLU_RS28320	0.12	-0.1
6,308,550	-		PFLU_RS28320	0.12	-2.4
6,308,550	-		PFLU_RS28320	0.12	+0.2
6,308,550	-		PFLU_RS28320	0.12	-1.6
6,308,550	-		PFLU_RS28320	0.12	-0.4
6,308,551	+		PFLU_RS28320	0.12	-1.2
6,308,551	+		PFLU_RS28320	0.12	-0.7
6,308,552	-		PFLU_RS28320	0.12	-0.6
6,308,552	-		PFLU_RS28320	0.12	-1.4
6,308,552	-		PFLU_RS28320	0.12	-1.2
6,308,552	-		PFLU_RS28320	0.12	-0.4
6,308,738	+		PFLU_RS28320	0.31	-0.6
6,309,039	-		PFLU_RS28320	0.63	-0.4
6,309,101	+		PFLU_RS28320	0.69	-1.4
6,309,378	+				-0.2
6,309,378	+				+0.9
6,309,378	+				+0.6
6,309,378	+				+0.3
6,309,379	-				-0.1
6,309,379	-				+0.5
6,309,379	-				-0.6
6,309,379	-				-0.3
6,309,379	-				-0.5
6,309,394	+				+2.1
6,309,394	+				-0.6
6,309,394	+				-0.1
6,309,394	+				-0.6
6,309,394	+				+0.3
6,309,394	+				-2.2
6,309,394	+				+0.6
6,309,394	+				+1.2
6,309,394	+				+0.0
6,309,394	+				-0.2
6,309,394	+				-0.2
6,309,394	+				+0.6
6,309,394	+				-0.2
6,309,394	+				+0.1
6,309,394	+				+0.4
6,309,394	+				-0.7
6,309,394	+				-0.1
6,309,394	+				-0.5
6,309,394	+				-0.1
6,309,394	+				+1.0
6,309,394	+				-0.8
6,309,394	+				+0.3
6,309,394	+				+0.6
6,309,395	-				+0.8
6,309,395	-				-1.6
6,309,395	-				+0.9
6,309,395	-				-0.9
6,309,395	-				+1.1
6,309,395	-				-0.4
6,309,395	-				-0.4
6,309,395	-				-0.7
6,309,395	-				-1.1
6,309,395	-				-0.7
6,309,395	-				-0.1
6,309,395	-				+0.1
6,309,395	-				+1.3
6,309,395	-				-0.8
6,309,395	-				-0.5
6,309,395	-				+1.8
6,309,395	-				-0.2
6,309,425	+				-0.3
6,309,780	+		PFLU_RS28325	0.34	+0.7
6,309,781	-		PFLU_RS28325	0.34	-0.4
6,310,028	-		PFLU_RS28325	0.62	-0.6
6,310,028	-		PFLU_RS28325	0.62	-1.7
6,310,028	-		PFLU_RS28325	0.62	-1.3
6,310,072	+		PFLU_RS28325	0.67	-0.1
6,310,072	+		PFLU_RS28325	0.67	-1.3
6,310,072	+		PFLU_RS28325	0.67	+0.2
6,310,072	+		PFLU_RS28325	0.67	-0.3
6,310,072	+		PFLU_RS28325	0.67	-0.6
6,310,072	+		PFLU_RS28325	0.67	-1.0
6,310,072	+		PFLU_RS28325	0.67	-0.8
6,310,072	+		PFLU_RS28325	0.67	-0.6
6,310,073	-		PFLU_RS28325	0.67	+1.2
6,310,073	-		PFLU_RS28325	0.67	-0.3
6,310,073	-		PFLU_RS28325	0.67	+0.1
6,310,073	-		PFLU_RS28325	0.67	-1.4
6,310,073	-		PFLU_RS28325	0.67	-0.4
6,310,074	+		PFLU_RS28325	0.67	-0.6
6,310,075	-		PFLU_RS28325	0.67	-0.3
6,310,075	-		PFLU_RS28325	0.67	+1.0
6,310,075	-		PFLU_RS28325	0.67	+0.2
6,310,150	+		PFLU_RS28325	0.75	-0.8
6,310,150	+		PFLU_RS28325	0.75	-2.2
6,310,151	-		PFLU_RS28325	0.75	+0.7
6,310,167	-		PFLU_RS28325	0.77	-0.8
6,310,196	+		PFLU_RS28325	0.80	-1.3
6,310,196	+		PFLU_RS28325	0.80	-1.1
6,310,196	+		PFLU_RS28325	0.80	+0.7
6,310,196	+		PFLU_RS28325	0.80	+0.2
6,310,196	+		PFLU_RS28325	0.80	-1.3
6,310,196	+		PFLU_RS28325	0.80	+0.2
6,310,196	+		PFLU_RS28325	0.80	-0.3
6,310,196	+		PFLU_RS28325	0.80	+0.2
6,310,196	+		PFLU_RS28325	0.80	+1.4
6,310,196	+		PFLU_RS28325	0.80	-1.1
6,310,196	+		PFLU_RS28325	0.80	-0.7
6,310,196	+		PFLU_RS28325	0.80	-1.7
6,310,196	+		PFLU_RS28325	0.80	+1.6
6,310,196	+		PFLU_RS28325	0.80	-0.5
6,310,196	+		PFLU_RS28325	0.80	-1.7
6,310,197	-		PFLU_RS28325	0.80	-0.6
6,310,197	-		PFLU_RS28325	0.80	+0.9
6,310,197	-		PFLU_RS28325	0.80	+1.2
6,310,197	-		PFLU_RS28325	0.80	-1.1
6,310,197	-		PFLU_RS28325	0.80	-0.8
6,310,197	-		PFLU_RS28325	0.80	-0.1
6,310,197	-		PFLU_RS28325	0.80	-0.3
6,310,197	-		PFLU_RS28325	0.80	+1.7
6,310,198	+		PFLU_RS28325	0.80	+0.0
6,310,198	+		PFLU_RS28325	0.80	+1.7
6,310,198	+		PFLU_RS28325	0.80	-0.6
6,310,198	+		PFLU_RS28325	0.80	+0.7
6,310,198	+		PFLU_RS28325	0.80	+1.2
6,310,198	+		PFLU_RS28325	0.80	+0.3
6,310,198	+		PFLU_RS28325	0.80	-0.4
6,310,198	+		PFLU_RS28325	0.80	-1.4
6,310,198	+		PFLU_RS28325	0.80	-1.0
6,310,198	+		PFLU_RS28325	0.80	+0.7
6,310,199	-		PFLU_RS28325	0.81	+0.6
6,310,199	-		PFLU_RS28325	0.81	-2.0
6,310,199	-		PFLU_RS28325	0.81	+0.2
6,310,199	-		PFLU_RS28325	0.81	+1.2
6,310,199	-		PFLU_RS28325	0.81	+0.2
6,310,199	-		PFLU_RS28325	0.81	-0.8
6,310,199	-		PFLU_RS28325	0.81	+1.4
6,310,199	-		PFLU_RS28325	0.81	+0.3
6,310,199	-		PFLU_RS28325	0.81	+1.2
6,310,199	-		PFLU_RS28325	0.81	+0.2
6,310,199	-		PFLU_RS28325	0.81	-0.6
6,310,199	-		PFLU_RS28325	0.81	+0.3
6,310,199	-		PFLU_RS28325	0.81	-1.3
6,310,199	-		PFLU_RS28325	0.81	-0.4
6,310,199	-		PFLU_RS28325	0.81	+0.7
6,310,388	+				-0.8
6,310,388	+				-0.5
6,310,388	+				-0.5
6,310,389	-				+1.3
6,310,389	-				+0.3
6,310,389	-				-0.3
6,310,389	-				-0.1