Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS28180

Experiment: malate (C) and Ammonium chloride (N); with MOPS; with PEG

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	malate (C) and Ammonium chloride (N); with MOPS; with PEG
6,274,520	+				+0.4
6,274,520	+				+0.9
6,274,520	+				+0.2
6,274,520	+				+0.1
6,274,520	+				+0.3
6,274,520	+				-0.1
6,274,520	+				-0.8
6,274,520	+				-0.8
6,274,520	+				+0.1
6,274,521	-				-0.5
6,274,521	-				+0.5
6,274,521	-				-0.1
6,274,521	-				-0.5
6,274,521	-				+0.1
6,274,521	-				+1.0
6,274,521	-				+0.8
6,274,521	-				-0.2
6,274,521	-				+0.9
6,274,521	-				-0.8
6,274,521	-				-0.8
6,274,542	+				-0.0
6,274,542	+				-0.4
6,274,543	-				-0.1
6,274,543	-				-0.3
6,274,584	+		PFLU_RS28175	0.13	+0.7
6,274,584	+		PFLU_RS28175	0.13	-0.0
6,274,584	+		PFLU_RS28175	0.13	+0.2
6,274,584	+		PFLU_RS28175	0.13	-1.3
6,274,584	+		PFLU_RS28175	0.13	-0.3
6,274,584	+		PFLU_RS28175	0.13	-0.7
6,274,584	+		PFLU_RS28175	0.13	-1.2
6,274,584	+		PFLU_RS28175	0.13	-0.1
6,274,584	+		PFLU_RS28175	0.13	+0.5
6,274,584	+		PFLU_RS28175	0.13	-0.3
6,274,584	+		PFLU_RS28175	0.13	-2.2
6,274,584	+		PFLU_RS28175	0.13	+0.4
6,274,584	+		PFLU_RS28175	0.13	+0.3
6,274,584	+		PFLU_RS28175	0.13	+0.4
6,274,584	+		PFLU_RS28175	0.13	+0.4
6,274,584	+		PFLU_RS28175	0.13	+0.4
6,274,584	+		PFLU_RS28175	0.13	+1.3
6,274,584	+		PFLU_RS28175	0.13	+0.1
6,274,584	+		PFLU_RS28175	0.13	-0.8
6,274,585	-		PFLU_RS28175	0.13	-0.4
6,274,585	-		PFLU_RS28175	0.13	-0.1
6,274,585	-		PFLU_RS28175	0.13	-1.5
6,274,585	-		PFLU_RS28175	0.13	-0.4
6,274,585	-		PFLU_RS28175	0.13	-1.7
6,274,585	-		PFLU_RS28175	0.13	+0.3
6,274,585	-		PFLU_RS28175	0.13	+0.7
6,274,585	-		PFLU_RS28175	0.13	+0.1
6,274,585	-		PFLU_RS28175	0.13	+0.3
6,274,585	-		PFLU_RS28175	0.13	+0.4
6,274,585	-		PFLU_RS28175	0.13	-0.1
6,274,585	-		PFLU_RS28175	0.13	-1.6
6,274,590	+		PFLU_RS28175	0.14	+0.3
6,274,590	+		PFLU_RS28175	0.14	+0.7
6,274,590	+		PFLU_RS28175	0.14	-0.6
6,274,590	+		PFLU_RS28175	0.14	-0.2
6,274,591	-		PFLU_RS28175	0.14	-0.6
6,274,591	-		PFLU_RS28175	0.14	+0.3
6,274,591	-		PFLU_RS28175	0.14	-0.7
6,274,623	+		PFLU_RS28175	0.18	-2.4
6,274,624	-		PFLU_RS28175	0.18	-0.6
6,274,774	+		PFLU_RS28175	0.37	-1.4
6,274,774	+		PFLU_RS28175	0.37	+0.3
6,274,774	+		PFLU_RS28175	0.37	+0.2
6,274,774	+		PFLU_RS28175	0.37	-0.2
6,274,774	+		PFLU_RS28175	0.37	-1.0
6,274,774	+		PFLU_RS28175	0.37	-0.9
6,274,774	+		PFLU_RS28175	0.37	+1.5
6,274,774	+		PFLU_RS28175	0.37	-0.2
6,274,774	+		PFLU_RS28175	0.37	-0.4
6,274,774	+		PFLU_RS28175	0.37	-1.1
6,274,774	+		PFLU_RS28175	0.37	+0.2
6,274,774	+		PFLU_RS28175	0.37	+0.8
6,274,774	+		PFLU_RS28175	0.37	+1.4
6,274,774	+		PFLU_RS28175	0.37	-0.2
6,274,774	+		PFLU_RS28175	0.37	+1.4
6,274,774	+		PFLU_RS28175	0.37	-0.0
6,274,774	+		PFLU_RS28175	0.37	-1.5
6,274,774	+		PFLU_RS28175	0.37	+1.1
6,274,774	+		PFLU_RS28175	0.37	-1.3
6,274,775	-		PFLU_RS28175	0.37	+0.8
6,274,775	-		PFLU_RS28175	0.37	+0.7
6,274,775	-		PFLU_RS28175	0.37	-1.2
6,274,775	-		PFLU_RS28175	0.37	+0.2
6,274,775	-		PFLU_RS28175	0.37	-1.2
6,274,775	-		PFLU_RS28175	0.37	+0.8
6,274,775	-		PFLU_RS28175	0.37	-1.2
6,274,775	-		PFLU_RS28175	0.37	-0.8
6,274,775	-		PFLU_RS28175	0.37	-1.1
6,274,775	-		PFLU_RS28175	0.37	+1.1
6,274,775	-		PFLU_RS28175	0.37	-0.8
6,274,775	-		PFLU_RS28175	0.37	+1.0
6,274,775	-		PFLU_RS28175	0.37	-0.3
6,274,775	-		PFLU_RS28175	0.37	-0.8
6,274,775	-		PFLU_RS28175	0.37	+1.4
6,274,775	-		PFLU_RS28175	0.37	+0.4
6,274,775	-		PFLU_RS28175	0.37	-0.9
6,274,775	-		PFLU_RS28175	0.37	+1.3
6,274,775	-		PFLU_RS28175	0.37	+0.1
6,274,775	-		PFLU_RS28175	0.37	-0.3
6,274,775	-		PFLU_RS28175	0.37	-0.8
6,274,775	-		PFLU_RS28175	0.37	+0.6
6,274,776	+		PFLU_RS28175	0.37	+1.0
6,274,777	-		PFLU_RS28175	0.37	+0.4
6,274,818	+		PFLU_RS28175	0.42	+1.1
6,274,818	+		PFLU_RS28175	0.42	+0.8
6,274,818	+		PFLU_RS28175	0.42	+0.3
6,274,818	+		PFLU_RS28175	0.42	+0.2
6,274,818	+		PFLU_RS28175	0.42	-0.7
6,274,818	+		PFLU_RS28175	0.42	-0.5
6,274,818	+		PFLU_RS28175	0.42	+0.8
6,274,818	+		PFLU_RS28175	0.42	-0.1
6,274,818	+		PFLU_RS28175	0.42	+1.8
6,274,818	+		PFLU_RS28175	0.42	+0.5
6,274,818	+		PFLU_RS28175	0.42	-0.0
6,274,818	+		PFLU_RS28175	0.42	+0.6
6,274,819	-		PFLU_RS28175	0.43	-0.2
6,274,819	-		PFLU_RS28175	0.43	-1.4
6,274,819	-		PFLU_RS28175	0.43	+0.8
6,274,819	-		PFLU_RS28175	0.43	-0.6
6,274,819	-		PFLU_RS28175	0.43	-0.6
6,274,819	-		PFLU_RS28175	0.43	-1.1
6,274,819	-		PFLU_RS28175	0.43	+0.0
6,274,894	-		PFLU_RS28175	0.52	-0.9
6,274,894	-		PFLU_RS28175	0.52	-0.0
6,274,894	-		PFLU_RS28175	0.52	-1.3
6,274,894	-		PFLU_RS28175	0.52	+1.0
6,274,894	-		PFLU_RS28175	0.52	-0.5
6,274,899	+		PFLU_RS28175	0.53	+0.5
6,274,899	+		PFLU_RS28175	0.53	-1.2
6,274,899	+		PFLU_RS28175	0.53	+0.8
6,274,899	+		PFLU_RS28175	0.53	-0.5
6,274,900	-		PFLU_RS28175	0.53	-0.1
6,274,900	-		PFLU_RS28175	0.53	+1.4
6,274,900	-		PFLU_RS28175	0.53	-0.2
6,274,975	+		PFLU_RS28175	0.62	+0.7
6,274,975	+		PFLU_RS28175	0.62	-0.1
6,274,975	+		PFLU_RS28175	0.62	-0.1
6,274,975	+		PFLU_RS28175	0.62	-0.9
6,274,975	+		PFLU_RS28175	0.62	-0.4
6,274,975	+		PFLU_RS28175	0.62	+0.0
6,274,976	-		PFLU_RS28175	0.62	+0.6
6,274,976	-		PFLU_RS28175	0.62	-0.9
6,274,976	-		PFLU_RS28175	0.62	-0.1
6,274,976	-		PFLU_RS28175	0.62	-0.0
6,274,976	-		PFLU_RS28175	0.62	+0.1
6,275,137	+		PFLU_RS28175	0.83	-0.6
6,275,137	+		PFLU_RS28175	0.83	-0.3
6,275,137	+		PFLU_RS28175	0.83	+0.6
6,275,138	-		PFLU_RS28175	0.83	-0.6
6,275,138	-		PFLU_RS28175	0.83	-0.5
6,275,138	-		PFLU_RS28175	0.83	-0.7
6,275,138	-		PFLU_RS28175	0.83	-0.6
6,275,184	+		PFLU_RS28175	0.89	-1.0
6,275,184	+		PFLU_RS28175	0.89	+0.5
6,275,185	-		PFLU_RS28175	0.89	+1.2
6,275,185	-		PFLU_RS28175	0.89	+0.2
6,275,185	-		PFLU_RS28175	0.89	+0.1
6,275,185	-		PFLU_RS28175	0.89	+1.2
6,275,185	-		PFLU_RS28175	0.89	-1.9
6,275,185	-		PFLU_RS28175	0.89	+2.2
6,275,185	-		PFLU_RS28175	0.89	+1.4
6,275,185	-		PFLU_RS28175	0.89	-0.1
6,275,205	+				-0.9
6,275,205	+				-0.7
6,275,205	+				-0.8
6,275,205	+				+2.8
6,275,206	-				-1.7
6,275,206	-				-1.0
6,275,206	-				+0.6
6,275,206	-				-0.4
6,275,206	-				+0.1
6,275,206	-				-1.8
6,275,206	-				+0.1
6,275,206	-				-0.5
6,275,206	-				-0.1
6,275,225	+				-0.0
6,275,226	-				-0.2
6,275,226	-				-0.5
6,275,226	-				-0.2
6,275,226	-				-0.6
6,275,226	-				+1.0
6,275,283	+				+0.3
6,275,283	+				-0.5
6,275,283	+				-0.6
6,275,284	-				-0.2
6,275,284	-				+0.5
6,275,284	-				+0.6
6,275,284	-				-1.4
6,275,284	-				-1.1
6,275,284	-				-0.1
6,275,284	-				-0.7
6,275,285	+				+0.4
6,275,285	+				+0.2
6,275,286	-				-0.9
6,275,286	-				+0.2
6,275,429	+				+1.9
6,275,430	-				-0.1
6,275,456	-				-1.8
6,275,456	-				-1.6
6,275,456	-				-1.0
6,275,475	+				+0.3
6,275,475	+				-0.7
6,275,476	-				-2.3
6,275,479	+				+0.2
6,275,480	-				-0.3
6,275,480	-				-0.6
6,275,480	-				-2.4
6,275,480	-				-0.5
6,275,480	-				-2.3
6,275,480	-				+0.2
6,275,490	+				+0.1
6,275,490	+				-1.9
6,275,490	+				-1.2
6,275,490	+				-1.2
6,275,490	+				-1.6
6,275,490	+				-0.9
6,275,491	-				+0.5
6,275,491	-				-0.1
6,275,491	-				-2.2
6,275,491	-				+0.4
6,275,529	+				-2.3
6,275,529	+				-0.8
6,275,530	-				-0.7
6,275,530	-				-0.9
6,275,555	+				-1.7
6,275,557	+				+0.0
6,275,558	-				-1.6
6,275,566	+				+0.8
6,275,567	-				-1.1
6,275,638	+				-1.4
6,275,638	+				+0.3
6,275,639	-				-1.6
6,275,639	-				-1.6
6,275,639	-				-1.2
6,275,639	-				-0.7
6,275,639	-				-1.5
6,275,644	+				-0.2
6,275,644	+				-0.6
6,275,644	+				-1.8
6,275,644	+				-0.3
6,275,645	-				-0.1
6,275,645	-				-1.6
6,275,740	-		PFLU_RS28180	0.13	-2.1
6,275,798	+		PFLU_RS28180	0.16	-2.6
6,275,798	+		PFLU_RS28180	0.16	+0.6
6,275,799	-		PFLU_RS28180	0.16	-1.2
6,275,799	-		PFLU_RS28180	0.16	-2.5
6,275,799	-		PFLU_RS28180	0.16	+0.1
6,275,799	-		PFLU_RS28180	0.16	+0.3
6,275,799	-		PFLU_RS28180	0.16	-0.2
6,275,799	-		PFLU_RS28180	0.16	-0.6
6,276,265	+		PFLU_RS28180	0.41	-0.8
6,276,296	+		PFLU_RS28180	0.42	-1.1
6,276,492	-		PFLU_RS28180	0.53	-1.5
6,276,492	-		PFLU_RS28180	0.53	+0.2
6,276,492	-		PFLU_RS28180	0.53	-1.0
6,276,492	-		PFLU_RS28180	0.53	-1.1
6,276,492	-		PFLU_RS28180	0.53	-0.8
6,276,492	-		PFLU_RS28180	0.53	+0.2
6,276,492	-		PFLU_RS28180	0.53	-0.4
6,276,492	-		PFLU_RS28180	0.53	-2.1
6,276,492	-		PFLU_RS28180	0.53	-0.6
6,276,649	-		PFLU_RS28180	0.61	-1.4
6,276,799	+		PFLU_RS28180	0.69	-1.1
6,276,800	-		PFLU_RS28180	0.69	-1.1
6,276,800	-		PFLU_RS28180	0.69	-2.3
6,276,940	+		PFLU_RS28180	0.77	+0.2
6,276,940	+		PFLU_RS28180	0.77	-2.8
6,276,940	+		PFLU_RS28180	0.77	-1.9
6,276,962	+		PFLU_RS28180	0.78	-1.9
6,276,962	+		PFLU_RS28180	0.78	-0.2
6,276,962	+		PFLU_RS28180	0.78	-1.9
6,276,962	+		PFLU_RS28180	0.78	+0.2
6,276,962	+		PFLU_RS28180	0.78	-0.2
6,276,962	+		PFLU_RS28180	0.78	-2.2
6,276,962	+		PFLU_RS28180	0.78	+0.1
6,276,962	+		PFLU_RS28180	0.78	-1.4
6,276,963	-		PFLU_RS28180	0.78	-1.7
6,276,963	-		PFLU_RS28180	0.78	-0.9
6,276,963	-		PFLU_RS28180	0.78	-2.7
6,276,963	-		PFLU_RS28180	0.78	-0.2
6,276,963	-		PFLU_RS28180	0.78	-0.2
6,276,963	-		PFLU_RS28180	0.78	-0.7
6,276,963	-		PFLU_RS28180	0.78	-0.8
6,277,138	+		PFLU_RS28180	0.87	+0.3
6,277,138	+		PFLU_RS28180	0.87	-1.0
6,277,409	+				-0.9
6,277,410	-				-0.6
6,277,410	-				-1.1
6,277,410	-				-1.4
6,277,410	-				+0.9
6,277,410	-				-0.3
6,277,410	-				-1.0
6,277,410	-				-0.3
6,277,513	+				+0.1
6,277,513	+				+0.2
6,277,513	+				-0.8
6,277,513	+				-1.4
6,277,513	+				+0.1
6,277,513	+				+0.5
6,277,513	+				+0.9
6,277,513	+				-0.2
6,277,513	+				+0.2
6,277,514	-				-1.8
6,277,514	-				+0.5
6,277,514	-				-0.7
6,277,514	-				+1.0
6,277,514	-				+0.8
6,277,514	-				+0.8
6,277,519	+				+0.1
6,277,519	+				-0.7
6,277,520	-				+0.9
6,277,584	+				+1.8
6,277,584	+				+0.0
6,277,584	+				+1.0
6,277,584	+				-0.8
6,277,584	+				+1.0
6,277,584	+				-0.5
6,277,584	+				+1.8
6,277,584	+				-0.8
6,277,584	+				+0.2
6,277,585	-				-1.1
6,277,585	-				+0.6
6,277,585	-				-0.4
6,277,585	-				+0.1
6,277,585	-				+0.6
6,277,585	-				-0.7
6,277,585	-				-0.4
6,277,585	-				-0.3
6,277,585	-				+0.6
6,277,585	-				-1.9
6,277,585	-				-1.4
6,277,585	-				-0.1
6,277,585	-				-0.7
6,277,793	+		PFLU_RS28185	0.36	+0.0
6,277,794	-		PFLU_RS28185	0.36	-0.2
6,277,823	-		PFLU_RS28185	0.41	-1.8
6,277,987	+		PFLU_RS28185	0.70	+0.0
6,277,987	+		PFLU_RS28185	0.70	+0.5
6,277,987	+		PFLU_RS28185	0.70	+0.5
6,277,987	+		PFLU_RS28185	0.70	-1.4
6,277,987	+		PFLU_RS28185	0.70	-0.1
6,277,988	-		PFLU_RS28185	0.70	-1.2
6,277,988	-		PFLU_RS28185	0.70	+0.1
6,277,988	-		PFLU_RS28185	0.70	+1.5
6,277,988	-		PFLU_RS28185	0.70	-0.4
6,277,988	-		PFLU_RS28185	0.70	+0.2
6,277,988	-		PFLU_RS28185	0.70	+0.2
6,278,008	+		PFLU_RS28185	0.73	-1.1
6,278,009	-		PFLU_RS28185	0.74	+0.8
6,278,009	-		PFLU_RS28185	0.74	-0.3
6,278,019	+		PFLU_RS28185	0.75	-0.6
6,278,019	+		PFLU_RS28185	0.75	-0.8
6,278,019	+		PFLU_RS28185	0.75	-1.8
6,278,019	+		PFLU_RS28185	0.75	+0.9
6,278,019	+		PFLU_RS28185	0.75	+0.3
6,278,019	+		PFLU_RS28185	0.75	-0.1
6,278,019	+		PFLU_RS28185	0.75	-0.9
6,278,019	+		PFLU_RS28185	0.75	-0.2
6,278,019	+		PFLU_RS28185	0.75	+0.5
6,278,019	+		PFLU_RS28185	0.75	+0.2
6,278,019	+		PFLU_RS28185	0.75	+0.3
6,278,019	+		PFLU_RS28185	0.75	-2.1
6,278,019	+		PFLU_RS28185	0.75	-0.3
6,278,019	+		PFLU_RS28185	0.75	+0.2
6,278,019	+		PFLU_RS28185	0.75	-0.7
6,278,019	+		PFLU_RS28185	0.75	-0.2
6,278,019	+		PFLU_RS28185	0.75	+0.8
6,278,019	+		PFLU_RS28185	0.75	-1.1
6,278,019	+		PFLU_RS28185	0.75	+1.1
6,278,020	-		PFLU_RS28185	0.75	+0.3
6,278,020	-		PFLU_RS28185	0.75	+0.3
6,278,020	-		PFLU_RS28185	0.75	+1.0
6,278,020	-		PFLU_RS28185	0.75	+0.3
6,278,020	-		PFLU_RS28185	0.75	-0.8
6,278,020	-		PFLU_RS28185	0.75	+0.8
6,278,020	-		PFLU_RS28185	0.75	-0.9
6,278,020	-		PFLU_RS28185	0.75	+0.1
6,278,020	-		PFLU_RS28185	0.75	-1.5
6,278,020	-		PFLU_RS28185	0.75	+1.1
6,278,020	-		PFLU_RS28185	0.75	-1.1
6,278,020	-		PFLU_RS28185	0.75	+2.8
6,278,025	+		PFLU_RS28185	0.76	-0.1
6,278,025	+		PFLU_RS28185	0.76	+1.3
6,278,085	+		PFLU_RS28185	0.87	-0.1
6,278,085	+		PFLU_RS28185	0.87	+0.6
6,278,085	+		PFLU_RS28185	0.87	-0.6
6,278,085	+		PFLU_RS28185	0.87	-0.9
6,278,085	+		PFLU_RS28185	0.87	-0.9
6,278,085	+		PFLU_RS28185	0.87	-0.7
6,278,086	-		PFLU_RS28185	0.87	+1.2
6,278,086	-		PFLU_RS28185	0.87	-0.4
6,278,086	-		PFLU_RS28185	0.87	-0.1
6,278,086	-		PFLU_RS28185	0.87	+0.8
6,278,086	-		PFLU_RS28185	0.87	-0.4
6,278,126	-				-0.3
6,278,168	+				+0.5
6,278,168	+				+0.6
6,278,168	+				-0.1
6,278,168	+				+1.0
6,278,168	+				-0.2
6,278,168	+				-1.5
6,278,168	+				-0.6
6,278,169	-				-0.2
6,278,169	-				-0.6
6,278,169	-				-1.5
6,278,169	-				+0.9
6,278,169	-				-0.6
6,278,220	+				-0.4
6,278,221	-				-0.1
6,278,241	+				+1.2
6,278,241	+				-0.2
6,278,242	-				-0.7
6,278,242	-				+0.5
6,278,306	+		PFLU_RS28190	0.20	+0.1
6,278,306	+		PFLU_RS28190	0.20	+0.1
6,278,306	+		PFLU_RS28190	0.20	-0.8
6,278,306	+		PFLU_RS28190	0.20	-0.7
6,278,306	+		PFLU_RS28190	0.20	+0.0
6,278,307	-		PFLU_RS28190	0.20	-0.2
6,278,307	-		PFLU_RS28190	0.20	+1.4
6,278,345	-		PFLU_RS28190	0.27	+1.2