Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS26535

Experiment: malate (C) and Ammonium chloride (N); with MOPS; with PEG

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	malate (C) and Ammonium chloride (N); with MOPS; with PEG
5,931,757	+				-1.1
5,931,757	+				+0.6
5,931,757	+				-0.3
5,931,757	+				-0.4
5,931,757	+				-0.0
5,931,757	+				+0.2
5,931,758	-				+0.7
5,931,758	-				+0.2
5,931,762	+				-0.5
5,931,762	+				-0.7
5,931,762	+				-0.0
5,931,763	-				-1.5
5,931,837	-				-0.6
5,931,922	+				+0.2
5,931,922	+				-1.1
5,931,922	+				+0.8
5,931,923	-				-0.7
5,931,941	+				-0.6
5,931,941	+				-1.0
5,931,941	+				+0.1
5,931,941	+				-0.5
5,931,941	+				-0.6
5,931,941	+				+0.8
5,931,941	+				-1.4
5,931,941	+				+1.0
5,931,941	+				+0.1
5,931,941	+				-0.9
5,931,941	+				+0.0
5,931,941	+				-0.9
5,931,941	+				-0.5
5,931,941	+				-0.7
5,931,942	-				-0.1
5,931,942	-				-1.2
5,931,942	-				+0.2
5,931,942	-				+0.8
5,931,942	-				+0.8
5,931,942	-				+1.6
5,931,942	-				+0.2
5,931,942	-				-0.6
5,931,942	-				+0.4
5,931,942	-				+1.8
5,931,942	-				-0.3
5,931,945	+				-0.4
5,931,945	+				-0.3
5,931,945	+				+0.5
5,931,945	+				+0.6
5,931,945	+				+1.1
5,931,945	+				-0.5
5,931,945	+				-0.2
5,931,945	+				-1.6
5,931,945	+				-1.0
5,931,945	+				-1.2
5,931,945	+				+0.7
5,931,945	+				+2.1
5,931,945	+				-1.0
5,931,945	+				-0.4
5,931,945	+				-1.8
5,931,945	+				-0.9
5,931,945	+				-0.5
5,931,946	-				+0.8
5,931,946	-				-1.4
5,931,946	-				+0.5
5,931,946	-				+0.4
5,931,946	-				+1.2
5,931,946	-				+1.2
5,931,946	-				-0.3
5,931,946	-				-0.2
5,931,946	-				-1.3
5,931,946	-				+1.4
5,931,946	-				-0.4
5,931,946	-				-1.0
5,932,437	+		PFLU_RS26530	0.63	-1.2
5,932,437	+		PFLU_RS26530	0.63	-0.4
5,932,437	+		PFLU_RS26530	0.63	+0.2
5,932,437	+		PFLU_RS26530	0.63	+1.4
5,932,437	+		PFLU_RS26530	0.63	-0.4
5,932,437	+		PFLU_RS26530	0.63	+0.3
5,932,437	+		PFLU_RS26530	0.63	-0.1
5,932,437	+		PFLU_RS26530	0.63	-0.1
5,932,438	-		PFLU_RS26530	0.63	-1.1
5,932,438	-		PFLU_RS26530	0.63	-0.8
5,932,438	-		PFLU_RS26530	0.63	-1.1
5,932,438	-		PFLU_RS26530	0.63	-2.0
5,932,438	-		PFLU_RS26530	0.63	-0.6
5,932,438	-		PFLU_RS26530	0.63	-0.6
5,932,438	-		PFLU_RS26530	0.63	+0.8
5,932,438	-		PFLU_RS26530	0.63	-0.8
5,932,438	-		PFLU_RS26530	0.63	-0.5
5,932,438	-		PFLU_RS26530	0.63	+0.3
5,932,438	-		PFLU_RS26530	0.63	+0.1
5,932,438	-		PFLU_RS26530	0.63	-0.6
5,932,439	+		PFLU_RS26530	0.63	-0.6
5,932,439	+		PFLU_RS26530	0.63	+0.6
5,932,439	+		PFLU_RS26530	0.63	-1.2
5,932,439	+		PFLU_RS26530	0.63	-1.8
5,932,440	-		PFLU_RS26530	0.63	-0.2
5,932,440	-		PFLU_RS26530	0.63	-0.8
5,932,440	-		PFLU_RS26530	0.63	-0.6
5,932,440	-		PFLU_RS26530	0.63	-0.7
5,932,440	-		PFLU_RS26530	0.63	-0.5
5,932,440	-		PFLU_RS26530	0.63	-1.4
5,932,498	+		PFLU_RS26530	0.70	-1.2
5,932,498	+		PFLU_RS26530	0.70	-0.1
5,932,499	-		PFLU_RS26530	0.71	-0.5
5,932,499	-		PFLU_RS26530	0.71	+0.2
5,932,499	-		PFLU_RS26530	0.71	-2.0
5,932,499	-		PFLU_RS26530	0.71	-0.1
5,932,500	+		PFLU_RS26530	0.71	+0.8
5,932,500	+		PFLU_RS26530	0.71	-1.6
5,932,500	+		PFLU_RS26530	0.71	-0.9
5,932,500	+		PFLU_RS26530	0.71	-0.2
5,932,500	+		PFLU_RS26530	0.71	-0.2
5,932,500	+		PFLU_RS26530	0.71	-0.9
5,932,501	-		PFLU_RS26530	0.71	-0.8
5,932,501	-		PFLU_RS26530	0.71	-0.3
5,932,501	-		PFLU_RS26530	0.71	+0.1
5,932,501	-		PFLU_RS26530	0.71	-1.8
5,932,501	-		PFLU_RS26530	0.71	+1.0
5,932,501	-		PFLU_RS26530	0.71	-1.1
5,932,501	-		PFLU_RS26530	0.71	-0.5
5,932,501	-		PFLU_RS26530	0.71	+0.5
5,932,501	-		PFLU_RS26530	0.71	-0.6
5,932,501	-		PFLU_RS26530	0.71	-0.5
5,932,501	-		PFLU_RS26530	0.71	-1.1
5,932,501	-		PFLU_RS26530	0.71	-1.7
5,932,529	+		PFLU_RS26530	0.74	+1.3
5,932,529	+		PFLU_RS26530	0.74	-0.7
5,932,529	+		PFLU_RS26530	0.74	-0.3
5,932,530	-		PFLU_RS26530	0.74	-2.1
5,932,530	-		PFLU_RS26530	0.74	+0.9
5,932,530	-		PFLU_RS26530	0.74	-1.0
5,932,530	-		PFLU_RS26530	0.74	-0.3
5,932,530	-		PFLU_RS26530	0.74	+0.0
5,932,530	-		PFLU_RS26530	0.74	-1.2
5,932,554	+		PFLU_RS26530	0.77	-1.4
5,932,554	+		PFLU_RS26530	0.77	-1.6
5,932,554	+		PFLU_RS26530	0.77	-0.6
5,932,554	+		PFLU_RS26530	0.77	-1.2
5,932,554	+		PFLU_RS26530	0.77	-0.9
5,932,554	+		PFLU_RS26530	0.77	-0.6
5,932,554	+		PFLU_RS26530	0.77	-0.4
5,932,554	+		PFLU_RS26530	0.77	+0.4
5,932,554	+		PFLU_RS26530	0.77	-0.7
5,932,554	+		PFLU_RS26530	0.77	-1.0
5,932,554	+		PFLU_RS26530	0.77	-0.6
5,932,554	+		PFLU_RS26530	0.77	-1.6
5,932,555	-		PFLU_RS26530	0.78	-1.7
5,932,555	-		PFLU_RS26530	0.78	-0.8
5,932,555	-		PFLU_RS26530	0.78	-0.5
5,932,555	-		PFLU_RS26530	0.78	-0.3
5,932,555	-		PFLU_RS26530	0.78	-0.5
5,932,555	-		PFLU_RS26530	0.78	+1.0
5,932,555	-		PFLU_RS26530	0.78	+1.4
5,932,555	-		PFLU_RS26530	0.78	-1.8
5,932,555	-		PFLU_RS26530	0.78	-0.9
5,932,555	-		PFLU_RS26530	0.78	-1.8
5,932,555	-		PFLU_RS26530	0.78	-0.6
5,932,555	-		PFLU_RS26530	0.78	-0.3
5,932,555	-		PFLU_RS26530	0.78	-1.2
5,932,555	-		PFLU_RS26530	0.78	-0.6
5,932,555	-		PFLU_RS26530	0.78	-0.3
5,932,555	-		PFLU_RS26530	0.78	-1.4
5,932,555	-		PFLU_RS26530	0.78	+0.0
5,932,555	-		PFLU_RS26530	0.78	-1.9
5,932,555	-		PFLU_RS26530	0.78	-0.7
5,932,555	-		PFLU_RS26530	0.78	-0.2
5,932,555	-		PFLU_RS26530	0.78	-0.3
5,932,555	-		PFLU_RS26530	0.78	+0.1
5,932,555	-		PFLU_RS26530	0.78	-0.8
5,932,555	-		PFLU_RS26530	0.78	-0.6
5,932,555	-		PFLU_RS26530	0.78	-0.5
5,932,555	-		PFLU_RS26530	0.78	-0.2
5,932,647	+		PFLU_RS26530	0.89	-1.5
5,932,647	+		PFLU_RS26530	0.89	-0.1
5,932,647	+		PFLU_RS26530	0.89	-0.3
5,932,647	+		PFLU_RS26530	0.89	-2.7
5,932,647	+		PFLU_RS26530	0.89	+0.8
5,932,647	+		PFLU_RS26530	0.89	-1.0
5,932,647	+		PFLU_RS26530	0.89	-1.6
5,932,647	+		PFLU_RS26530	0.89	+0.9
5,932,647	+		PFLU_RS26530	0.89	-0.8
5,932,647	+		PFLU_RS26530	0.89	-1.2
5,932,648	-		PFLU_RS26530	0.89	-1.7
5,932,648	-		PFLU_RS26530	0.89	-0.5
5,932,648	-		PFLU_RS26530	0.89	-0.4
5,932,648	-		PFLU_RS26530	0.89	-0.9
5,932,648	-		PFLU_RS26530	0.89	-1.6
5,932,700	-				-0.0
5,932,731	+				-0.8
5,932,731	+				-1.2
5,932,732	-				-0.4
5,932,732	-				+0.6
5,932,732	-				-1.2
5,932,759	+				+0.3
5,932,759	+				+0.1
5,932,759	+				+2.0
5,932,759	+				-0.5
5,932,759	+				+0.3
5,932,759	+				+0.2
5,932,759	+				-2.7
5,932,759	+				+0.5
5,932,759	+				-0.3
5,932,759	+				+0.4
5,932,759	+				-0.4
5,932,759	+				-1.2
5,932,759	+				-0.2
5,932,759	+				+1.3
5,932,760	-				+1.2
5,932,760	-				+0.2
5,932,760	-				-1.6
5,932,760	-				+0.1
5,932,760	-				+0.8
5,932,760	-				-0.1
5,932,760	-				+1.8
5,932,760	-				-0.4
5,932,770	+				+0.0
5,932,815	+		PFLU_RS26535	0.10	-1.3
5,932,815	+		PFLU_RS26535	0.10	-0.5
5,932,929	+		PFLU_RS26535	0.28	-0.6
5,932,929	+		PFLU_RS26535	0.28	-1.3
5,932,929	+		PFLU_RS26535	0.28	-1.6
5,932,929	+		PFLU_RS26535	0.28	-0.7
5,932,978	+		PFLU_RS26535	0.36	-0.4
5,932,978	+		PFLU_RS26535	0.36	-1.7
5,933,118	+		PFLU_RS26535	0.58	-0.6
5,933,118	+		PFLU_RS26535	0.58	-0.3
5,933,118	+		PFLU_RS26535	0.58	+0.1
5,933,118	+		PFLU_RS26535	0.58	+1.0
5,933,118	+		PFLU_RS26535	0.58	-1.6
5,933,118	+		PFLU_RS26535	0.58	+0.2
5,933,118	+		PFLU_RS26535	0.58	-0.7
5,933,119	-		PFLU_RS26535	0.58	-0.8
5,933,119	-		PFLU_RS26535	0.58	-0.1
5,933,119	-		PFLU_RS26535	0.58	-2.0
5,933,119	-		PFLU_RS26535	0.58	+0.3
5,933,119	-		PFLU_RS26535	0.58	-0.6
5,933,119	-		PFLU_RS26535	0.58	-1.5
5,933,119	-		PFLU_RS26535	0.58	-1.0
5,933,119	-		PFLU_RS26535	0.58	-1.2
5,933,119	-		PFLU_RS26535	0.58	-0.5
5,933,228	-		PFLU_RS26535	0.76	-0.3
5,933,321	+				-1.8
5,933,322	-				+1.0
5,933,322	-				-0.2
5,933,379	+				+0.4
5,933,379	+				-0.3