Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS23510

Experiment: malate (C) and Ammonium chloride (N); with MOPS; with PEG

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	malate (C) and Ammonium chloride (N); with MOPS; with PEG
5,278,707	+		PFLU_RS23505	0.23	+0.5
5,278,708	-		PFLU_RS23505	0.23	+0.6
5,278,731	+		PFLU_RS23505	0.26	-1.5
5,278,731	+		PFLU_RS23505	0.26	-0.5
5,278,731	+		PFLU_RS23505	0.26	+0.3
5,278,731	+		PFLU_RS23505	0.26	+0.6
5,278,732	-		PFLU_RS23505	0.26	+0.0
5,278,732	-		PFLU_RS23505	0.26	+0.1
5,278,732	-		PFLU_RS23505	0.26	+0.2
5,278,732	-		PFLU_RS23505	0.26	-1.9
5,278,732	-		PFLU_RS23505	0.26	-1.4
5,278,732	-		PFLU_RS23505	0.26	+0.5
5,278,788	+		PFLU_RS23505	0.32	-0.5
5,278,788	+		PFLU_RS23505	0.32	-0.5
5,278,789	-		PFLU_RS23505	0.32	-0.6
5,278,789	-		PFLU_RS23505	0.32	+0.7
5,278,789	-		PFLU_RS23505	0.32	-0.9
5,278,789	-		PFLU_RS23505	0.32	+1.3
5,278,789	-		PFLU_RS23505	0.32	-0.9
5,278,834	+		PFLU_RS23505	0.37	-0.4
5,278,835	-		PFLU_RS23505	0.38	-0.3
5,278,854	+		PFLU_RS23505	0.40	+0.1
5,278,854	+		PFLU_RS23505	0.40	-0.3
5,278,854	+		PFLU_RS23505	0.40	+0.2
5,278,854	+		PFLU_RS23505	0.40	+0.7
5,278,855	-		PFLU_RS23505	0.40	+0.1
5,278,855	-		PFLU_RS23505	0.40	+0.8
5,278,855	-		PFLU_RS23505	0.40	-1.0
5,278,855	-		PFLU_RS23505	0.40	-1.2
5,278,855	-		PFLU_RS23505	0.40	+0.6
5,278,855	-		PFLU_RS23505	0.40	-0.3
5,279,007	+		PFLU_RS23505	0.57	+0.7
5,279,007	+		PFLU_RS23505	0.57	+0.2
5,279,007	+		PFLU_RS23505	0.57	-1.4
5,279,008	-		PFLU_RS23505	0.57	-0.3
5,279,085	+		PFLU_RS23505	0.66	-0.4
5,279,085	+		PFLU_RS23505	0.66	+1.2
5,279,085	+		PFLU_RS23505	0.66	-0.8
5,279,085	+		PFLU_RS23505	0.66	+0.5
5,279,085	+		PFLU_RS23505	0.66	+1.2
5,279,085	+		PFLU_RS23505	0.66	+0.4
5,279,085	+		PFLU_RS23505	0.66	+3.4
5,279,086	-		PFLU_RS23505	0.66	-0.4
5,279,086	-		PFLU_RS23505	0.66	+2.1
5,279,407	+				-1.2
5,279,407	+				-0.7
5,279,407	+				+0.7
5,279,407	+				-0.2
5,279,407	+				-0.1
5,279,407	+				-0.8
5,279,407	+				-1.1
5,279,407	+				+0.4
5,279,408	-				-1.1
5,279,408	-				-0.5
5,279,408	-				-1.1
5,279,408	-				-1.9
5,279,408	-				+0.6
5,279,567	+				-0.3
5,279,567	+				-0.6
5,279,567	+				-0.3
5,279,567	+				-0.5
5,279,580	+				-0.4
5,279,592	-				-0.7
5,279,651	+				-0.7
5,279,710	+				+0.8
5,279,710	+				-1.0
5,279,710	+				-2.0
5,279,710	+				-0.7
5,279,710	+				-1.4
5,279,710	+				+0.6
5,279,710	+				-1.2
5,279,711	-				-0.8
5,279,711	-				-2.0
5,279,711	-				-1.7
5,279,711	-				-1.7
5,279,711	-				-1.2
5,279,785	+		PFLU_RS23510	0.18	-0.8
5,279,785	+		PFLU_RS23510	0.18	-0.5
5,279,785	+		PFLU_RS23510	0.18	-1.2
5,279,785	+		PFLU_RS23510	0.18	-2.5
5,279,785	+		PFLU_RS23510	0.18	-0.2
5,279,785	+		PFLU_RS23510	0.18	-0.5
5,279,785	+		PFLU_RS23510	0.18	-3.5
5,279,785	+		PFLU_RS23510	0.18	-2.0
5,279,785	+		PFLU_RS23510	0.18	-2.9
5,279,786	-		PFLU_RS23510	0.18	-2.9
5,279,786	-		PFLU_RS23510	0.18	-1.8
5,279,786	-		PFLU_RS23510	0.18	+0.8
5,279,786	-		PFLU_RS23510	0.18	-1.2
5,279,786	-		PFLU_RS23510	0.18	-1.5
5,279,786	-		PFLU_RS23510	0.18	-2.7
5,279,869	-		PFLU_RS23510	0.29	-1.8
5,279,894	+		PFLU_RS23510	0.32	-1.4
5,279,895	-		PFLU_RS23510	0.32	-2.7
5,279,909	+		PFLU_RS23510	0.34	-2.0
5,279,909	+		PFLU_RS23510	0.34	-3.0
5,279,909	+		PFLU_RS23510	0.34	-1.7
5,279,909	+		PFLU_RS23510	0.34	-1.9
5,279,909	+		PFLU_RS23510	0.34	+0.5
5,279,910	-		PFLU_RS23510	0.34	-0.5
5,279,910	-		PFLU_RS23510	0.34	-3.2
5,279,910	-		PFLU_RS23510	0.34	-1.5
5,279,910	-		PFLU_RS23510	0.34	-0.8
5,279,910	-		PFLU_RS23510	0.34	-0.5
5,279,910	-		PFLU_RS23510	0.34	-3.0
5,279,910	-		PFLU_RS23510	0.34	-1.3
5,279,910	-		PFLU_RS23510	0.34	-2.5
5,279,979	-		PFLU_RS23510	0.43	-0.0
5,279,979	-		PFLU_RS23510	0.43	-2.1
5,279,979	-		PFLU_RS23510	0.43	-1.2
5,279,979	-		PFLU_RS23510	0.43	-1.7
5,279,979	-		PFLU_RS23510	0.43	-0.4
5,280,057	+		PFLU_RS23510	0.53	-0.0
5,280,057	+		PFLU_RS23510	0.53	-1.5
5,280,057	+		PFLU_RS23510	0.53	-2.2
5,280,057	+		PFLU_RS23510	0.53	+1.0
5,280,057	+		PFLU_RS23510	0.53	-1.3
5,280,057	+		PFLU_RS23510	0.53	-2.2
5,280,057	+		PFLU_RS23510	0.53	-0.5
5,280,057	+		PFLU_RS23510	0.53	-2.8
5,280,057	+		PFLU_RS23510	0.53	-1.5
5,280,057	+		PFLU_RS23510	0.53	-2.6
5,280,057	+		PFLU_RS23510	0.53	-1.7
5,280,057	+		PFLU_RS23510	0.53	-0.3
5,280,057	+		PFLU_RS23510	0.53	-0.8
5,280,057	+		PFLU_RS23510	0.53	-1.0
5,280,057	+		PFLU_RS23510	0.53	-0.6
5,280,057	+		PFLU_RS23510	0.53	-2.1
5,280,057	+		PFLU_RS23510	0.53	-1.8
5,280,057	+		PFLU_RS23510	0.53	-3.4
5,280,057	+		PFLU_RS23510	0.53	-0.5
5,280,057	+		PFLU_RS23510	0.53	-1.3
5,280,057	+		PFLU_RS23510	0.53	-2.1
5,280,057	+		PFLU_RS23510	0.53	-1.8
5,280,057	+		PFLU_RS23510	0.53	-0.6
5,280,057	+		PFLU_RS23510	0.53	-0.5
5,280,057	+		PFLU_RS23510	0.53	-1.7
5,280,057	+		PFLU_RS23510	0.53	-2.2
5,280,057	+		PFLU_RS23510	0.53	-0.2
5,280,057	+		PFLU_RS23510	0.53	-1.8
5,280,057	+		PFLU_RS23510	0.53	-2.7
5,280,057	+		PFLU_RS23510	0.53	-2.9
5,280,057	+		PFLU_RS23510	0.53	-1.2
5,280,058	-		PFLU_RS23510	0.54	-1.1
5,280,058	-		PFLU_RS23510	0.54	-0.5
5,280,058	-		PFLU_RS23510	0.54	-1.4
5,280,058	-		PFLU_RS23510	0.54	-0.6
5,280,058	-		PFLU_RS23510	0.54	-3.3
5,280,058	-		PFLU_RS23510	0.54	-1.9
5,280,058	-		PFLU_RS23510	0.54	-0.1
5,280,058	-		PFLU_RS23510	0.54	-1.2
5,280,058	-		PFLU_RS23510	0.54	-1.0
5,280,058	-		PFLU_RS23510	0.54	-1.7
5,280,058	-		PFLU_RS23510	0.54	-1.5
5,280,058	-		PFLU_RS23510	0.54	-2.4
5,280,058	-		PFLU_RS23510	0.54	-1.2
5,280,058	-		PFLU_RS23510	0.54	-2.3
5,280,058	-		PFLU_RS23510	0.54	+0.8
5,280,058	-		PFLU_RS23510	0.54	-0.8
5,280,058	-		PFLU_RS23510	0.54	-2.3
5,280,058	-		PFLU_RS23510	0.54	-1.8
5,280,058	-		PFLU_RS23510	0.54	-2.0
5,280,058	-		PFLU_RS23510	0.54	-2.3
5,280,058	-		PFLU_RS23510	0.54	-1.6
5,280,058	-		PFLU_RS23510	0.54	-1.4
5,280,058	-		PFLU_RS23510	0.54	-2.3
5,280,058	-		PFLU_RS23510	0.54	-2.0
5,280,058	-		PFLU_RS23510	0.54	-1.2
5,280,058	-		PFLU_RS23510	0.54	-1.2
5,280,059	+		PFLU_RS23510	0.54	-1.3
5,280,059	+		PFLU_RS23510	0.54	-2.6
5,280,059	+		PFLU_RS23510	0.54	-1.2
5,280,059	+		PFLU_RS23510	0.54	-2.0
5,280,059	+		PFLU_RS23510	0.54	-2.1
5,280,059	+		PFLU_RS23510	0.54	-1.2
5,280,059	+		PFLU_RS23510	0.54	-1.4
5,280,059	+		PFLU_RS23510	0.54	-3.1
5,280,059	+		PFLU_RS23510	0.54	-2.4
5,280,059	+		PFLU_RS23510	0.54	-1.6
5,280,059	+		PFLU_RS23510	0.54	-1.9
5,280,059	+		PFLU_RS23510	0.54	-0.4
5,280,059	+		PFLU_RS23510	0.54	-0.7
5,280,059	+		PFLU_RS23510	0.54	-0.5
5,280,059	+		PFLU_RS23510	0.54	-0.8
5,280,059	+		PFLU_RS23510	0.54	-0.3
5,280,059	+		PFLU_RS23510	0.54	-2.5
5,280,060	-		PFLU_RS23510	0.54	-1.6
5,280,060	-		PFLU_RS23510	0.54	-2.4
5,280,060	-		PFLU_RS23510	0.54	-1.5
5,280,060	-		PFLU_RS23510	0.54	-0.8
5,280,060	-		PFLU_RS23510	0.54	-1.9
5,280,060	-		PFLU_RS23510	0.54	-0.5
5,280,060	-		PFLU_RS23510	0.54	-0.3
5,280,060	-		PFLU_RS23510	0.54	-1.9
5,280,060	-		PFLU_RS23510	0.54	-2.5
5,280,060	-		PFLU_RS23510	0.54	-1.5
5,280,060	-		PFLU_RS23510	0.54	-1.6
5,280,060	-		PFLU_RS23510	0.54	-0.9
5,280,060	-		PFLU_RS23510	0.54	-0.4
5,280,137	+		PFLU_RS23510	0.64	-1.1
5,280,137	+		PFLU_RS23510	0.64	-2.0
5,280,137	+		PFLU_RS23510	0.64	-1.9
5,280,137	+		PFLU_RS23510	0.64	-1.7
5,280,137	+		PFLU_RS23510	0.64	-0.1
5,280,137	+		PFLU_RS23510	0.64	-0.6
5,280,138	-		PFLU_RS23510	0.64	-1.7
5,280,262	-		PFLU_RS23510	0.80	-2.9
5,280,262	-		PFLU_RS23510	0.80	-1.4
5,280,262	-		PFLU_RS23510	0.80	-1.2
5,280,262	-		PFLU_RS23510	0.80	-1.8
5,280,323	+		PFLU_RS23510	0.88	-2.8
5,280,323	+		PFLU_RS23510	0.88	-0.5
5,280,323	+		PFLU_RS23510	0.88	-1.6
5,280,323	+		PFLU_RS23510	0.88	-1.9
5,280,323	+		PFLU_RS23510	0.88	-3.4
5,280,323	+		PFLU_RS23510	0.88	-1.9
5,280,323	+		PFLU_RS23510	0.88	-2.2
5,280,323	+		PFLU_RS23510	0.88	-1.6
5,280,323	+		PFLU_RS23510	0.88	-0.2
5,280,323	+		PFLU_RS23510	0.88	-0.3
5,280,324	-		PFLU_RS23510	0.88	-1.5
5,280,324	-		PFLU_RS23510	0.88	-0.9
5,280,324	-		PFLU_RS23510	0.88	-3.4
5,280,324	-		PFLU_RS23510	0.88	-1.3
5,280,324	-		PFLU_RS23510	0.88	-0.5
5,280,324	-		PFLU_RS23510	0.88	-1.5
5,280,324	-		PFLU_RS23510	0.88	-0.3
5,280,427	+				-2.8
5,280,427	+				-1.5
5,280,427	+				-1.7
5,280,428	-				-1.0
5,280,428	-				-2.6
5,280,428	-				-1.3
5,280,445	+				-0.7
5,280,445	+				-2.3
5,280,445	+				-1.5
5,280,445	+				-1.7
5,280,446	-				-1.8
5,280,446	-				-2.6
5,280,475	+				+0.8
5,280,478	+				-2.3
5,280,509	-				-2.0
5,280,559	+				-0.5
5,280,559	+				-0.2
5,280,559	+				+0.1
5,280,559	+				+0.8
5,280,560	-				-0.2
5,280,560	-				-0.5
5,280,560	-				+0.2
5,280,560	-				-0.8
5,280,636	+		PFLU_RS23515	0.11	+0.6
5,280,636	+		PFLU_RS23515	0.11	+0.1
5,280,637	-		PFLU_RS23515	0.11	-0.4
5,280,742	+		PFLU_RS23515	0.23	+2.0
5,280,742	+		PFLU_RS23515	0.23	+0.9
5,280,742	+		PFLU_RS23515	0.23	+0.6
5,280,742	+		PFLU_RS23515	0.23	+0.0
5,280,742	+		PFLU_RS23515	0.23	-0.5
5,280,742	+		PFLU_RS23515	0.23	-1.6
5,280,742	+		PFLU_RS23515	0.23	-0.2
5,280,743	-		PFLU_RS23515	0.23	-1.6
5,280,743	-		PFLU_RS23515	0.23	-0.5
5,280,743	-		PFLU_RS23515	0.23	+0.8
5,280,743	-		PFLU_RS23515	0.23	-2.0
5,280,829	+		PFLU_RS23515	0.32	-1.2
5,280,829	+		PFLU_RS23515	0.32	-1.1
5,280,829	+		PFLU_RS23515	0.32	-0.1
5,280,830	-		PFLU_RS23515	0.32	-0.6
5,280,830	-		PFLU_RS23515	0.32	-1.2
5,280,836	+		PFLU_RS23515	0.33	+1.5
5,280,844	+		PFLU_RS23515	0.34	+0.8
5,280,844	+		PFLU_RS23515	0.34	-2.0
5,280,844	+		PFLU_RS23515	0.34	-0.1
5,280,844	+		PFLU_RS23515	0.34	-1.0
5,280,845	-		PFLU_RS23515	0.34	-1.2
5,280,999	+		PFLU_RS23515	0.51	+0.5
5,281,002	+		PFLU_RS23515	0.51	-1.3
5,281,002	+		PFLU_RS23515	0.51	-0.0
5,281,002	+		PFLU_RS23515	0.51	-0.2
5,281,002	+		PFLU_RS23515	0.51	+0.2
5,281,002	+		PFLU_RS23515	0.51	-0.2
5,281,002	+		PFLU_RS23515	0.51	+0.2
5,281,002	+		PFLU_RS23515	0.51	+0.7
5,281,002	+		PFLU_RS23515	0.51	+0.1
5,281,002	+		PFLU_RS23515	0.51	-1.1
5,281,002	+		PFLU_RS23515	0.51	-0.7
5,281,002	+		PFLU_RS23515	0.51	-0.7
5,281,003	-		PFLU_RS23515	0.51	-0.8
5,281,003	-		PFLU_RS23515	0.51	-1.6
5,281,003	-		PFLU_RS23515	0.51	-0.9
5,281,003	-		PFLU_RS23515	0.51	-0.4
5,281,003	-		PFLU_RS23515	0.51	-0.6
5,281,003	-		PFLU_RS23515	0.51	-0.2
5,281,003	-		PFLU_RS23515	0.51	-0.9
5,281,003	-		PFLU_RS23515	0.51	+0.4
5,281,003	-		PFLU_RS23515	0.51	-0.7
5,281,003	-		PFLU_RS23515	0.51	-0.6
5,281,003	-		PFLU_RS23515	0.51	-0.7
5,281,003	-		PFLU_RS23515	0.51	-0.5
5,281,003	-		PFLU_RS23515	0.51	+0.4
5,281,108	+		PFLU_RS23515	0.63	-0.1
5,281,108	+		PFLU_RS23515	0.63	-0.1
5,281,108	+		PFLU_RS23515	0.63	-0.2
5,281,108	+		PFLU_RS23515	0.63	-0.3
5,281,108	+		PFLU_RS23515	0.63	+0.5
5,281,108	+		PFLU_RS23515	0.63	+1.1
5,281,109	-		PFLU_RS23515	0.63	-1.4
5,281,109	-		PFLU_RS23515	0.63	-0.7
5,281,109	-		PFLU_RS23515	0.63	+0.2
5,281,109	-		PFLU_RS23515	0.63	-2.9
5,281,109	-		PFLU_RS23515	0.63	-0.1
5,281,153	+		PFLU_RS23515	0.68	-0.7
5,281,194	+		PFLU_RS23515	0.72	+0.8
5,281,194	+		PFLU_RS23515	0.72	+0.4
5,281,195	-		PFLU_RS23515	0.72	-0.1
5,281,195	-		PFLU_RS23515	0.72	-0.6
5,281,399	+				+1.2
5,281,399	+				+0.2
5,281,399	+				+1.2
5,281,399	+				+0.4
5,281,399	+				+0.4
5,281,399	+				-0.7
5,281,399	+				+0.1
5,281,399	+				+0.0
5,281,400	-				+0.2