Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS23045

Experiment: malate (C) and Ammonium chloride (N); with MOPS; with PEG

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	malate (C) and Ammonium chloride (N); with MOPS; with PEG
5,178,244	+		PFLU_RS23035	0.88	-0.2
5,178,244	+		PFLU_RS23035	0.88	+0.0
5,178,244	+		PFLU_RS23035	0.88	+0.3
5,178,245	-		PFLU_RS23035	0.88	+0.4
5,178,245	-		PFLU_RS23035	0.88	+0.3
5,178,245	-		PFLU_RS23035	0.88	+0.6
5,178,245	-		PFLU_RS23035	0.88	-1.5
5,178,358	+				+0.2
5,178,358	+				-0.0
5,178,358	+				+0.7
5,178,358	+				+0.9
5,178,358	+				-1.3
5,178,358	+				-0.3
5,178,358	+				+0.5
5,178,358	+				-0.4
5,178,358	+				+0.1
5,178,358	+				+0.5
5,178,358	+				-0.7
5,178,358	+				-0.6
5,178,358	+				+0.1
5,178,358	+				-1.7
5,178,358	+				-0.7
5,178,358	+				-0.5
5,178,358	+				-1.4
5,178,358	+				-0.1
5,178,358	+				-0.7
5,178,359	-				-1.1
5,178,359	-				-0.7
5,178,359	-				-1.8
5,178,359	-				+0.5
5,178,359	-				+0.5
5,178,359	-				-0.5
5,178,359	-				+0.2
5,178,359	-				-0.1
5,178,359	-				+0.6
5,178,359	-				-0.2
5,178,359	-				-0.8
5,178,386	-				+0.8
5,178,392	+				-0.3
5,178,392	+				-1.0
5,178,393	-				+0.2
5,178,393	-				+0.4
5,178,393	-				-0.3
5,178,418	+				-0.7
5,178,518	+		PFLU_RS23040	0.17	+0.3
5,178,518	+		PFLU_RS23040	0.17	+0.6
5,178,519	-		PFLU_RS23040	0.17	+0.1
5,178,519	-		PFLU_RS23040	0.17	-0.3
5,178,635	+		PFLU_RS23040	0.31	-0.9
5,178,635	+		PFLU_RS23040	0.31	-1.3
5,178,635	+		PFLU_RS23040	0.31	+0.5
5,178,635	+		PFLU_RS23040	0.31	-0.8
5,178,635	+		PFLU_RS23040	0.31	+0.9
5,178,636	-		PFLU_RS23040	0.31	-1.2
5,178,636	-		PFLU_RS23040	0.31	+0.6
5,178,636	-		PFLU_RS23040	0.31	-1.4
5,178,636	-		PFLU_RS23040	0.31	-0.2
5,178,636	-		PFLU_RS23040	0.31	-1.5
5,178,636	-		PFLU_RS23040	0.31	+0.3
5,178,636	-		PFLU_RS23040	0.31	+0.3
5,178,636	-		PFLU_RS23040	0.31	+0.1
5,178,636	-		PFLU_RS23040	0.31	-0.1
5,178,672	-		PFLU_RS23040	0.36	+0.2
5,178,672	-		PFLU_RS23040	0.36	-0.4
5,178,672	-		PFLU_RS23040	0.36	+0.4
5,178,672	-		PFLU_RS23040	0.36	+1.1
5,178,815	-		PFLU_RS23040	0.53	+0.7
5,178,815	-		PFLU_RS23040	0.53	+0.9
5,178,861	+		PFLU_RS23040	0.59	+0.3
5,178,861	+		PFLU_RS23040	0.59	-1.1
5,178,861	+		PFLU_RS23040	0.59	-0.4
5,178,861	+		PFLU_RS23040	0.59	+1.2
5,178,861	+		PFLU_RS23040	0.59	+0.8
5,178,861	+		PFLU_RS23040	0.59	+0.8
5,178,862	-		PFLU_RS23040	0.59	-0.8
5,178,862	-		PFLU_RS23040	0.59	+0.7
5,178,865	+		PFLU_RS23040	0.59	-0.1
5,178,865	+		PFLU_RS23040	0.59	-0.4
5,178,865	+		PFLU_RS23040	0.59	+0.3
5,178,866	-		PFLU_RS23040	0.60	-0.0
5,178,889	+		PFLU_RS23040	0.62	+0.4
5,178,889	+		PFLU_RS23040	0.62	-0.2
5,178,890	-		PFLU_RS23040	0.62	+0.4
5,178,890	-		PFLU_RS23040	0.62	-0.9
5,178,914	-		PFLU_RS23040	0.65	+0.1
5,179,132	-				-0.5
5,179,457	+		PFLU_RS23045	0.21	+0.5
5,179,457	+		PFLU_RS23045	0.21	-1.5
5,179,458	-		PFLU_RS23045	0.21	-2.1
5,179,458	-		PFLU_RS23045	0.21	-1.2
5,179,458	-		PFLU_RS23045	0.21	-1.8
5,179,541	+		PFLU_RS23045	0.28	-1.8
5,179,541	+		PFLU_RS23045	0.28	+0.4
5,179,541	+		PFLU_RS23045	0.28	-1.2
5,179,541	+		PFLU_RS23045	0.28	+0.2
5,179,541	+		PFLU_RS23045	0.28	-1.5
5,179,541	+		PFLU_RS23045	0.28	-0.5
5,179,541	+		PFLU_RS23045	0.28	-0.8
5,179,541	+		PFLU_RS23045	0.28	-1.0
5,179,541	+		PFLU_RS23045	0.28	-0.4
5,179,541	+		PFLU_RS23045	0.28	-1.2
5,179,541	+		PFLU_RS23045	0.28	-1.5
5,179,542	-		PFLU_RS23045	0.28	-1.4
5,179,542	-		PFLU_RS23045	0.28	-1.5
5,179,542	-		PFLU_RS23045	0.28	+1.4
5,179,542	-		PFLU_RS23045	0.28	-0.3
5,179,542	-		PFLU_RS23045	0.28	-0.5
5,179,542	-		PFLU_RS23045	0.28	-0.2
5,179,542	-		PFLU_RS23045	0.28	-1.7
5,179,542	-		PFLU_RS23045	0.28	-1.2
5,179,677	-		PFLU_RS23045	0.39	-1.0
5,179,677	-		PFLU_RS23045	0.39	-0.2
5,179,747	+		PFLU_RS23045	0.44	-1.0
5,179,967	+		PFLU_RS23045	0.62	-1.4
5,179,967	+		PFLU_RS23045	0.62	-1.5
5,179,967	+		PFLU_RS23045	0.62	-1.5
5,179,967	+		PFLU_RS23045	0.62	+0.2
5,179,967	+		PFLU_RS23045	0.62	+2.3
5,179,968	-		PFLU_RS23045	0.62	-1.8
5,179,968	-		PFLU_RS23045	0.62	-1.8
5,179,968	-		PFLU_RS23045	0.62	-0.7
5,179,968	-		PFLU_RS23045	0.62	-0.8
5,179,968	-		PFLU_RS23045	0.62	-1.0
5,179,968	-		PFLU_RS23045	0.62	-1.2
5,179,968	-		PFLU_RS23045	0.62	-0.5
5,179,968	-		PFLU_RS23045	0.62	-1.2
5,179,968	-		PFLU_RS23045	0.62	-1.5
5,179,968	-		PFLU_RS23045	0.62	-1.2
5,179,968	-		PFLU_RS23045	0.62	-2.1
5,179,971	+		PFLU_RS23045	0.62	+2.2
5,179,971	+		PFLU_RS23045	0.62	-2.3
5,179,971	+		PFLU_RS23045	0.62	-1.5
5,179,972	-		PFLU_RS23045	0.62	+1.5
5,179,972	-		PFLU_RS23045	0.62	+0.8
5,179,972	-		PFLU_RS23045	0.62	-0.4
5,179,972	-		PFLU_RS23045	0.62	-1.8
5,179,972	-		PFLU_RS23045	0.62	-1.5
5,179,972	-		PFLU_RS23045	0.62	-1.5
5,179,972	-		PFLU_RS23045	0.62	-0.0
5,179,972	-		PFLU_RS23045	0.62	-0.8
5,180,016	+		PFLU_RS23045	0.66	-1.0
5,180,016	+		PFLU_RS23045	0.66	-1.4
5,180,017	-		PFLU_RS23045	0.66	-1.5
5,180,017	-		PFLU_RS23045	0.66	+0.8
5,180,211	-		PFLU_RS23045	0.82	-0.4
5,180,255	+		PFLU_RS23045	0.85	-2.0
5,180,256	-		PFLU_RS23045	0.85	-0.9
5,180,256	-		PFLU_RS23045	0.85	-0.8
5,180,268	+		PFLU_RS23045	0.86	-1.2
5,180,268	+		PFLU_RS23045	0.86	+0.6
5,180,268	+		PFLU_RS23045	0.86	-1.7
5,180,269	-		PFLU_RS23045	0.86	+2.4
5,180,269	-		PFLU_RS23045	0.86	-0.8
5,180,269	-		PFLU_RS23045	0.86	-0.5
5,180,304	-		PFLU_RS23045	0.89	+0.2
5,180,337	+				+0.2
5,180,403	+				-1.0
5,180,403	+				-1.8
5,180,403	+				-0.5
5,180,403	+				-0.1
5,180,403	+				-1.0
5,180,404	-				-1.2
5,180,404	-				-1.0
5,180,404	-				-0.8
5,180,404	-				+0.5
5,180,404	-				-0.8
5,180,404	-				-1.7
5,180,501	-				+0.3
5,180,523	-				+1.5
5,180,561	-				-0.1
5,180,561	-				-1.1
5,180,561	-				-0.6
5,180,568	-				-0.1
5,180,568	-				+0.8
5,180,568	-				+0.9
5,180,568	-				-1.4
5,180,568	-				-0.4
5,180,568	-				-0.4
5,180,568	-				+0.4
5,180,568	-				+1.1
5,180,568	-				-0.2
5,180,568	-				-1.9
5,180,568	-				-0.7
5,180,571	-				-2.0
5,180,571	-				+1.2
5,180,571	-				+1.2
5,180,571	-				+0.3
5,180,571	-				+0.7
5,180,584	-				-1.2
5,180,587	-				+0.1
5,180,587	-				+0.6
5,180,587	-				-0.9
5,180,587	-				-0.6
5,180,587	-				+1.3
5,180,587	-				-0.1
5,180,587	-				-1.8
5,180,860	-				-1.0
5,180,860	-				-0.8
5,180,860	-				+0.1
5,180,862	-				-1.0
5,180,862	-				-0.5
5,180,862	-				+0.7
5,180,862	-				+0.3
5,180,862	-				+0.2
5,180,862	-				+1.0
5,180,862	-				-0.4
5,180,862	-				+0.1
5,180,862	-				-0.2
5,180,923	-				+0.4
5,180,923	-				+0.5
5,180,923	-				+1.6
5,180,923	-				+0.7
5,180,925	-				-1.3
5,180,925	-				+0.0
5,180,943	-				-0.2
5,180,943	-				+1.0
5,180,943	-				-0.7
5,180,943	-				-1.1
5,180,943	-				-1.0
5,180,943	-				+0.3
5,180,945	-				+0.6
5,180,966	-				-1.7
5,180,998	+				-1.1
5,180,999	-				+0.5
5,180,999	-				-0.4
5,181,008	-				-1.5
5,181,008	-				-2.2
5,181,008	-				-0.5
5,181,008	-				-0.8
5,181,008	-				+0.2
5,181,008	-				+1.4
5,181,008	-				+1.5
5,181,008	-				+0.2
5,181,008	-				-0.2
5,181,008	-				-0.5
5,181,008	-				-0.9
5,181,008	-				-0.6
5,181,008	-				+0.6
5,181,008	-				+0.3
5,181,008	-				-0.4
5,181,008	-				-0.0
5,181,008	-				+1.4
5,181,008	-				-1.4
5,181,008	-				+1.2
5,181,008	-				-1.0
5,181,008	-				-0.1
5,181,008	-				-0.8
5,181,008	-				-1.5
5,181,008	-				+0.2
5,181,008	-				+0.2
5,181,008	-				+0.4
5,181,008	-				+0.4
5,181,008	-				-1.5