Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS21205

Experiment: malate (C) and Ammonium chloride (N); with MOPS; with PEG

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	malate (C) and Ammonium chloride (N); with MOPS; with PEG
4,771,174	-		PFLU_RS21200	0.52	-0.1
4,771,198	-		PFLU_RS21200	0.53	-1.3
4,771,311	+		PFLU_RS21200	0.60	-0.4
4,771,311	+		PFLU_RS21200	0.60	-2.1
4,771,312	-		PFLU_RS21200	0.60	-1.7
4,771,312	-		PFLU_RS21200	0.60	-0.8
4,771,312	-		PFLU_RS21200	0.60	-1.9
4,771,429	-		PFLU_RS21200	0.66	-1.5
4,771,429	-		PFLU_RS21200	0.66	-2.8
4,771,464	+		PFLU_RS21200	0.68	+0.2
4,771,464	+		PFLU_RS21200	0.68	-0.7
4,771,464	+		PFLU_RS21200	0.68	-1.0
4,771,464	+		PFLU_RS21200	0.68	+0.2
4,771,464	+		PFLU_RS21200	0.68	-0.6
4,771,464	+		PFLU_RS21200	0.68	-1.4
4,771,465	-		PFLU_RS21200	0.68	-1.2
4,771,465	-		PFLU_RS21200	0.68	-2.9
4,771,473	+		PFLU_RS21200	0.69	+1.5
4,771,473	+		PFLU_RS21200	0.69	-1.9
4,771,473	+		PFLU_RS21200	0.69	-1.5
4,771,473	+		PFLU_RS21200	0.69	-1.4
4,771,474	-		PFLU_RS21200	0.69	-0.8
4,771,474	-		PFLU_RS21200	0.69	-0.7
4,771,474	-		PFLU_RS21200	0.69	-2.2
4,771,474	-		PFLU_RS21200	0.69	-1.4
4,771,474	-		PFLU_RS21200	0.69	+0.5
4,771,809	+		PFLU_RS21200	0.88	-1.0
4,771,809	+		PFLU_RS21200	0.88	-0.8
4,771,809	+		PFLU_RS21200	0.88	-3.1
4,771,809	+		PFLU_RS21200	0.88	+0.4
4,771,809	+		PFLU_RS21200	0.88	-2.4
4,771,810	-		PFLU_RS21200	0.88	-1.0
4,771,810	-		PFLU_RS21200	0.88	-1.7
4,771,810	-		PFLU_RS21200	0.88	-1.5
4,771,810	-		PFLU_RS21200	0.88	-0.8
4,772,026	+				-2.2
4,772,049	+				-2.1
4,772,050	-				-1.9
4,772,085	+				+0.2
4,772,085	+				-1.3
4,772,085	+				-0.8
4,772,085	+				-2.7
4,772,085	+				+0.4
4,772,085	+				-1.2
4,772,085	+				-1.2
4,772,085	+				+0.3
4,772,086	-				-1.5
4,772,086	-				-1.6
4,772,086	-				-2.3
4,772,086	-				+0.2
4,772,086	-				-0.8
4,772,086	-				-1.1
4,772,086	-				-0.8
4,772,086	-				-1.2
4,772,256	+		PFLU_RS21205	0.13	-1.7
4,772,256	+		PFLU_RS21205	0.13	-0.6
4,772,256	+		PFLU_RS21205	0.13	-0.4
4,772,256	+		PFLU_RS21205	0.13	-0.7
4,772,256	+		PFLU_RS21205	0.13	-0.5
4,772,256	+		PFLU_RS21205	0.13	+0.0
4,772,256	+		PFLU_RS21205	0.13	-0.9
4,772,256	+		PFLU_RS21205	0.13	-0.4
4,772,256	+		PFLU_RS21205	0.13	-0.7
4,772,256	+		PFLU_RS21205	0.13	-1.2
4,772,256	+		PFLU_RS21205	0.13	-1.5
4,772,256	+		PFLU_RS21205	0.13	-1.3
4,772,256	+		PFLU_RS21205	0.13	-2.3
4,772,256	+		PFLU_RS21205	0.13	-0.7
4,772,256	+		PFLU_RS21205	0.13	-1.0
4,772,256	+		PFLU_RS21205	0.13	-1.4
4,772,257	-		PFLU_RS21205	0.13	+0.4
4,772,257	-		PFLU_RS21205	0.13	-1.5
4,772,257	-		PFLU_RS21205	0.13	-1.0
4,772,257	-		PFLU_RS21205	0.13	-0.8
4,772,257	-		PFLU_RS21205	0.13	-1.3
4,772,257	-		PFLU_RS21205	0.13	-0.1
4,772,257	-		PFLU_RS21205	0.13	-0.1
4,772,257	-		PFLU_RS21205	0.13	-0.5
4,772,257	-		PFLU_RS21205	0.13	+0.2
4,772,257	-		PFLU_RS21205	0.13	-0.9
4,772,257	-		PFLU_RS21205	0.13	-2.3
4,772,257	-		PFLU_RS21205	0.13	-1.2
4,772,257	-		PFLU_RS21205	0.13	-0.2
4,772,257	-		PFLU_RS21205	0.13	-3.4
4,772,257	-		PFLU_RS21205	0.13	-1.0
4,772,257	-		PFLU_RS21205	0.13	-0.4
4,772,257	-		PFLU_RS21205	0.13	-0.5
4,772,257	-		PFLU_RS21205	0.13	-1.0
4,772,257	-		PFLU_RS21205	0.13	-1.9
4,772,257	-		PFLU_RS21205	0.13	-1.9
4,772,365	+		PFLU_RS21205	0.19	-2.2
4,772,430	+		PFLU_RS21205	0.23	-0.6
4,772,430	+		PFLU_RS21205	0.23	-0.7
4,772,430	+		PFLU_RS21205	0.23	-1.5
4,772,431	-		PFLU_RS21205	0.23	-1.8
4,772,471	+		PFLU_RS21205	0.26	-1.4
4,772,472	-		PFLU_RS21205	0.26	+0.2
4,772,500	-		PFLU_RS21205	0.27	-1.9
4,772,698	-		PFLU_RS21205	0.39	-0.9
4,772,698	-		PFLU_RS21205	0.39	-1.3
4,772,792	+		PFLU_RS21205	0.44	-2.5
4,772,792	+		PFLU_RS21205	0.44	-1.0
4,772,793	-		PFLU_RS21205	0.44	-0.8
4,772,793	-		PFLU_RS21205	0.44	-1.2
4,772,846	+		PFLU_RS21205	0.47	-1.8
4,772,853	+		PFLU_RS21205	0.48	-1.8
4,772,853	+		PFLU_RS21205	0.48	-1.1
4,772,853	+		PFLU_RS21205	0.48	-1.7
4,772,853	+		PFLU_RS21205	0.48	-0.7
4,772,854	-		PFLU_RS21205	0.48	-1.2
4,772,926	+		PFLU_RS21205	0.52	-0.2
4,772,926	+		PFLU_RS21205	0.52	-1.2
4,772,926	+		PFLU_RS21205	0.52	-1.2
4,772,926	+		PFLU_RS21205	0.52	-1.6
4,772,927	-		PFLU_RS21205	0.52	-2.0
4,772,927	-		PFLU_RS21205	0.52	-2.0
4,773,468	+		PFLU_RS21205	0.83	-2.5
4,773,468	+		PFLU_RS21205	0.83	-2.4
4,773,468	+		PFLU_RS21205	0.83	-2.5
4,773,469	-		PFLU_RS21205	0.83	-1.5
4,773,663	+				-1.7
4,773,664	-				-1.4
4,773,664	-				+0.6
4,773,664	-				-0.8
4,773,664	-				-0.6
4,773,664	-				-1.3
4,773,664	-				-1.9
4,773,664	-				-0.1
4,773,671	+				-1.7
4,773,680	+				-2.6
4,773,680	+				-1.6
4,773,719	+				-1.7
4,773,720	-				-0.8
4,773,755	+				-0.2
4,773,755	+				-1.0
4,773,756	-				-0.7
4,773,785	+				+0.7
4,773,785	+				+0.6
4,773,785	+				+0.8
4,773,785	+				+0.2
4,773,786	-				+0.2
4,773,786	-				+1.1
4,773,786	-				-0.5
4,773,786	-				+1.1
4,773,786	-				-1.9
4,773,819	+				-0.9
4,773,819	+				+0.2
4,773,819	+				-0.7
4,773,820	-				-0.1
4,773,820	-				-0.4
4,773,835	+				+0.6
4,773,836	-				-0.8
4,773,891	+				-0.8
4,773,891	+				-0.9
4,773,891	+				-0.0
4,773,892	-				-1.0
4,773,892	-				-0.4
4,773,892	-				+1.0
4,774,072	+		PFLU_RS21210	0.24	+0.2
4,774,121	+		PFLU_RS21210	0.28	-0.0
4,774,242	+		PFLU_RS21210	0.38	+0.6
4,774,242	+		PFLU_RS21210	0.38	+0.2
4,774,293	+		PFLU_RS21210	0.43	+0.5
4,774,293	+		PFLU_RS21210	0.43	+1.8
4,774,293	+		PFLU_RS21210	0.43	-0.4
4,774,293	+		PFLU_RS21210	0.43	+0.9
4,774,293	+		PFLU_RS21210	0.43	+0.1
4,774,293	+		PFLU_RS21210	0.43	-0.6
4,774,293	+		PFLU_RS21210	0.43	+0.3
4,774,294	-		PFLU_RS21210	0.43	+0.3
4,774,294	-		PFLU_RS21210	0.43	-0.2
4,774,294	-		PFLU_RS21210	0.43	-0.4
4,774,294	-		PFLU_RS21210	0.43	-0.3
4,774,294	-		PFLU_RS21210	0.43	+0.6
4,774,294	-		PFLU_RS21210	0.43	-0.2
4,774,599	+		PFLU_RS21210	0.69	-1.0
4,774,600	-		PFLU_RS21210	0.69	-1.0
4,774,600	-		PFLU_RS21210	0.69	+1.4
4,774,600	-		PFLU_RS21210	0.69	+1.0
4,774,605	+		PFLU_RS21210	0.69	-0.8
4,774,605	+		PFLU_RS21210	0.69	+0.5
4,774,605	+		PFLU_RS21210	0.69	-0.3
4,774,606	-		PFLU_RS21210	0.69	-0.6
4,774,627	+		PFLU_RS21210	0.71	+1.1
4,774,627	+		PFLU_RS21210	0.71	+0.1
4,774,627	+		PFLU_RS21210	0.71	+0.4
4,774,627	+		PFLU_RS21210	0.71	+0.4
4,774,628	-		PFLU_RS21210	0.71	+0.6
4,774,628	-		PFLU_RS21210	0.71	+1.0
4,774,628	-		PFLU_RS21210	0.71	+0.3
4,774,628	-		PFLU_RS21210	0.71	+0.6
4,774,680	+		PFLU_RS21210	0.75	-2.9
4,774,680	+		PFLU_RS21210	0.75	+0.2
4,774,680	+		PFLU_RS21210	0.75	+0.9
4,774,680	+		PFLU_RS21210	0.75	-0.2
4,774,680	+		PFLU_RS21210	0.75	-0.4
4,774,681	-		PFLU_RS21210	0.76	-0.8
4,774,681	-		PFLU_RS21210	0.76	-0.3
4,774,681	-		PFLU_RS21210	0.76	+0.4
4,774,681	-		PFLU_RS21210	0.76	-1.6
4,774,681	-		PFLU_RS21210	0.76	-0.8
4,774,681	-		PFLU_RS21210	0.76	-0.2
4,774,681	-		PFLU_RS21210	0.76	-0.5