Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS16415

Experiment: malate (C) and Ammonium chloride (N); with MOPS; with PEG

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	malate (C) and Ammonium chloride (N); with MOPS; with PEG
3,721,281	+		PFLU_RS16410	0.40	-0.3
3,721,362	+		PFLU_RS16410	0.45	-0.8
3,721,362	+		PFLU_RS16410	0.45	-0.4
3,721,362	+		PFLU_RS16410	0.45	-0.6
3,721,399	-		PFLU_RS16410	0.47	-2.2
3,721,399	-		PFLU_RS16410	0.47	-2.8
3,721,409	+		PFLU_RS16410	0.48	+0.1
3,721,410	-		PFLU_RS16410	0.48	-2.0
3,721,410	-		PFLU_RS16410	0.48	-1.0
3,721,410	-		PFLU_RS16410	0.48	-2.4
3,721,431	+		PFLU_RS16410	0.49	-1.6
3,721,431	+		PFLU_RS16410	0.49	-0.2
3,721,431	+		PFLU_RS16410	0.49	-1.2
3,721,432	-		PFLU_RS16410	0.49	-1.9
3,721,432	-		PFLU_RS16410	0.49	-0.1
3,721,432	-		PFLU_RS16410	0.49	-0.9
3,721,432	-		PFLU_RS16410	0.49	-0.0
3,721,432	-		PFLU_RS16410	0.49	+0.0
3,721,448	+		PFLU_RS16410	0.51	-1.7
3,721,448	+		PFLU_RS16410	0.51	+0.2
3,721,449	-		PFLU_RS16410	0.51	-0.6
3,721,583	+		PFLU_RS16410	0.59	-0.2
3,721,908	+		PFLU_RS16410	0.80	-0.9
3,721,935	+		PFLU_RS16410	0.82	-3.3
3,721,935	+		PFLU_RS16410	0.82	-1.9
3,721,936	-		PFLU_RS16410	0.82	-1.6
3,721,936	-		PFLU_RS16410	0.82	-2.5
3,721,936	-		PFLU_RS16410	0.82	-1.8
3,721,936	-		PFLU_RS16410	0.82	-1.0
3,721,970	+		PFLU_RS16410	0.84	-0.2
3,721,970	+		PFLU_RS16410	0.84	-0.7
3,721,970	+		PFLU_RS16410	0.84	+0.8
3,721,971	-		PFLU_RS16410	0.84	-0.6
3,722,046	+		PFLU_RS16410	0.89	-0.2
3,722,047	-		PFLU_RS16410	0.89	-2.0
3,722,047	-		PFLU_RS16410	0.89	-1.4
3,722,172	+				-0.8
3,722,172	+				-1.0
3,722,172	+				-1.2
3,722,172	+				-0.7
3,722,172	+				-0.9
3,722,172	+				-2.4
3,722,172	+				-0.5
3,722,173	-				-0.7
3,722,173	-				-0.0
3,722,173	-				-0.8
3,722,173	-				+0.2
3,722,173	-				-1.4
3,722,214	+				+0.4
3,722,214	+				+0.1
3,722,214	+				-0.6
3,722,215	-				-1.2
3,722,234	+				-0.1
3,722,234	+				+1.0
3,722,234	+				+0.4
3,722,234	+				-0.4
3,722,234	+				+0.2
3,722,235	-				-1.6
3,722,235	-				-0.2
3,722,235	-				+0.2
3,722,235	-				-1.9
3,722,235	-				-2.1
3,722,235	-				-0.6
3,722,235	-				-1.0
3,722,235	-				-1.4
3,722,330	+				-1.6
3,722,330	+				-1.7
3,722,331	-				+0.3
3,722,331	-				-0.8
3,722,331	-				-1.2
3,722,331	-				-2.2
3,722,406	+				-2.0
3,722,407	-				-0.8
3,722,407	-				-1.8
3,722,407	-				-0.2
3,722,460	+		PFLU_RS16415	0.13	-0.8
3,722,511	+		PFLU_RS16415	0.16	-0.2
3,722,531	+		PFLU_RS16415	0.17	-0.6
3,722,585	+		PFLU_RS16415	0.20	-0.5
3,722,585	+		PFLU_RS16415	0.20	-1.9
3,722,585	+		PFLU_RS16415	0.20	-1.4
3,722,585	+		PFLU_RS16415	0.20	-0.9
3,722,585	+		PFLU_RS16415	0.20	+0.9
3,722,585	+		PFLU_RS16415	0.20	-1.4
3,722,585	+		PFLU_RS16415	0.20	-1.1
3,722,585	+		PFLU_RS16415	0.20	+0.4
3,722,585	+		PFLU_RS16415	0.20	-1.2
3,722,586	-		PFLU_RS16415	0.20	-1.2
3,722,586	-		PFLU_RS16415	0.20	-1.1
3,722,586	-		PFLU_RS16415	0.20	-0.1
3,722,586	-		PFLU_RS16415	0.20	-0.3
3,722,586	-		PFLU_RS16415	0.20	-2.0
3,722,586	-		PFLU_RS16415	0.20	-0.3
3,722,586	-		PFLU_RS16415	0.20	-0.8
3,722,586	-		PFLU_RS16415	0.20	-0.9
3,722,586	-		PFLU_RS16415	0.20	-0.8
3,722,754	-		PFLU_RS16415	0.30	-0.5
3,722,754	-		PFLU_RS16415	0.30	-2.8
3,722,831	+		PFLU_RS16415	0.34	-1.1
3,722,831	+		PFLU_RS16415	0.34	-0.9
3,722,831	+		PFLU_RS16415	0.34	-2.0
3,722,832	-		PFLU_RS16415	0.34	-1.6
3,722,832	-		PFLU_RS16415	0.34	-1.5
3,722,858	+		PFLU_RS16415	0.36	-2.0
3,722,859	-		PFLU_RS16415	0.36	-2.6
3,722,859	-		PFLU_RS16415	0.36	-1.6
3,722,859	-		PFLU_RS16415	0.36	-0.2
3,722,859	-		PFLU_RS16415	0.36	-1.1
3,722,871	-		PFLU_RS16415	0.36	+0.1
3,723,018	+		PFLU_RS16415	0.45	-0.6
3,723,179	-		PFLU_RS16415	0.54	-1.2
3,723,218	+		PFLU_RS16415	0.56	-2.2
3,723,218	+		PFLU_RS16415	0.56	-1.2
3,723,218	+		PFLU_RS16415	0.56	-1.4
3,723,218	+		PFLU_RS16415	0.56	-1.0
3,723,218	+		PFLU_RS16415	0.56	-1.0
3,723,218	+		PFLU_RS16415	0.56	+0.6
3,723,218	+		PFLU_RS16415	0.56	+0.4
3,723,219	-		PFLU_RS16415	0.56	-0.6
3,723,219	-		PFLU_RS16415	0.56	-1.7
3,723,219	-		PFLU_RS16415	0.56	+0.8
3,723,219	-		PFLU_RS16415	0.56	+0.9
3,723,219	-		PFLU_RS16415	0.56	-2.2
3,723,219	-		PFLU_RS16415	0.56	-0.8
3,723,219	-		PFLU_RS16415	0.56	-1.9
3,723,219	-		PFLU_RS16415	0.56	-2.6
3,723,219	-		PFLU_RS16415	0.56	-1.4
3,723,221	+		PFLU_RS16415	0.56	-0.8
3,723,221	+		PFLU_RS16415	0.56	-0.7
3,723,221	+		PFLU_RS16415	0.56	-0.1
3,723,222	-		PFLU_RS16415	0.56	-1.4
3,723,222	-		PFLU_RS16415	0.56	-1.9
3,723,222	-		PFLU_RS16415	0.56	-0.4
3,723,222	-		PFLU_RS16415	0.56	-2.5
3,723,280	+		PFLU_RS16415	0.60	-1.0
3,723,281	-		PFLU_RS16415	0.60	-2.7
3,723,284	+		PFLU_RS16415	0.60	-1.2
3,723,284	+		PFLU_RS16415	0.60	-1.4
3,723,284	+		PFLU_RS16415	0.60	+0.5
3,723,284	+		PFLU_RS16415	0.60	-1.5
3,723,285	-		PFLU_RS16415	0.60	-1.4
3,723,285	-		PFLU_RS16415	0.60	-0.8
3,723,285	-		PFLU_RS16415	0.60	-0.5
3,723,285	-		PFLU_RS16415	0.60	-0.6
3,723,285	-		PFLU_RS16415	0.60	-0.6
3,723,295	+		PFLU_RS16415	0.61	+0.0
3,723,295	+		PFLU_RS16415	0.61	-0.6
3,723,295	+		PFLU_RS16415	0.61	-1.2
3,723,295	+		PFLU_RS16415	0.61	-1.4
3,723,295	+		PFLU_RS16415	0.61	-0.6
3,723,296	-		PFLU_RS16415	0.61	-1.6
3,723,296	-		PFLU_RS16415	0.61	-1.3
3,723,296	-		PFLU_RS16415	0.61	-2.6
3,723,296	-		PFLU_RS16415	0.61	-0.8
3,723,296	-		PFLU_RS16415	0.61	-1.3
3,723,296	-		PFLU_RS16415	0.61	-0.7
3,723,296	-		PFLU_RS16415	0.61	-0.7
3,723,296	-		PFLU_RS16415	0.61	-0.8
3,723,296	-		PFLU_RS16415	0.61	-0.9
3,723,296	-		PFLU_RS16415	0.61	-1.5
3,723,708	-		PFLU_RS16415	0.84	-1.7
3,723,938	+				-1.0
3,723,939	-				-2.0
3,724,064	+				-1.6
3,724,064	+				-0.6
3,724,161	-				+1.2
3,724,161	-				-0.3
3,724,187	+				-0.9
3,724,228	+		PFLU_RS16420	0.12	-0.2
3,724,229	-		PFLU_RS16420	0.12	-1.2
3,724,347	+		PFLU_RS16420	0.18	-2.0
3,724,393	+		PFLU_RS16420	0.20	+0.0
3,724,394	-		PFLU_RS16420	0.20	-0.3
3,724,394	-		PFLU_RS16420	0.20	-0.6
3,724,394	-		PFLU_RS16420	0.20	-1.2
3,724,394	-		PFLU_RS16420	0.20	-0.4
3,724,456	+		PFLU_RS16420	0.23	-0.3
3,724,456	+		PFLU_RS16420	0.23	-0.6
3,724,456	+		PFLU_RS16420	0.23	-1.0
3,724,457	-		PFLU_RS16420	0.23	-0.7
3,724,607	-		PFLU_RS16420	0.30	+0.0
3,724,642	+		PFLU_RS16420	0.32	-2.1
3,724,642	+		PFLU_RS16420	0.32	-0.1
3,724,642	+		PFLU_RS16420	0.32	-1.7
3,724,643	-		PFLU_RS16420	0.32	-0.2
3,724,643	-		PFLU_RS16420	0.32	+0.3
3,724,643	-		PFLU_RS16420	0.32	-1.2
3,724,643	-		PFLU_RS16420	0.32	-1.7
3,724,795	+		PFLU_RS16420	0.39	+0.8
3,724,796	-		PFLU_RS16420	0.39	-1.0
3,724,796	-		PFLU_RS16420	0.39	-0.7
3,724,796	-		PFLU_RS16420	0.39	-2.8
3,724,796	-		PFLU_RS16420	0.39	-1.5
3,724,796	-		PFLU_RS16420	0.39	-0.7
3,724,796	-		PFLU_RS16420	0.39	-0.4
3,724,796	-		PFLU_RS16420	0.39	+0.2
3,724,796	-		PFLU_RS16420	0.39	-2.0
3,724,797	+		PFLU_RS16420	0.39	+1.0
3,724,797	+		PFLU_RS16420	0.39	-0.4
3,724,798	-		PFLU_RS16420	0.39	-0.2