Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS14665

Experiment: malate (C) and Ammonium chloride (N); with MOPS; with PEG

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	malate (C) and Ammonium chloride (N); with MOPS; with PEG
3,276,293	+				+0.6
3,276,293	+				+0.1
3,276,387	-		PFLU_RS14660	0.16	-0.4
3,276,467	+		PFLU_RS14660	0.25	-0.0
3,276,467	+		PFLU_RS14660	0.25	-0.6
3,276,468	-		PFLU_RS14660	0.25	+0.7
3,276,488	+		PFLU_RS14660	0.27	+1.0
3,276,489	-		PFLU_RS14660	0.27	-1.4
3,276,489	-		PFLU_RS14660	0.27	-0.1
3,276,489	-		PFLU_RS14660	0.27	-0.4
3,276,512	+		PFLU_RS14660	0.30	-0.3
3,276,512	+		PFLU_RS14660	0.30	+0.3
3,276,512	+		PFLU_RS14660	0.30	-0.9
3,276,513	-		PFLU_RS14660	0.30	+0.7
3,276,545	+		PFLU_RS14660	0.34	-0.0
3,276,545	+		PFLU_RS14660	0.34	-0.2
3,276,545	+		PFLU_RS14660	0.34	+1.1
3,276,546	-		PFLU_RS14660	0.34	+1.9
3,276,546	-		PFLU_RS14660	0.34	-0.9
3,276,546	-		PFLU_RS14660	0.34	+0.3
3,276,546	-		PFLU_RS14660	0.34	+1.4
3,276,546	-		PFLU_RS14660	0.34	-0.4
3,276,546	-		PFLU_RS14660	0.34	+0.3
3,276,563	+		PFLU_RS14660	0.36	-0.2
3,276,563	+		PFLU_RS14660	0.36	-1.2
3,276,563	+		PFLU_RS14660	0.36	+0.1
3,276,564	-		PFLU_RS14660	0.36	-0.5
3,276,564	-		PFLU_RS14660	0.36	+0.5
3,276,564	-		PFLU_RS14660	0.36	-0.4
3,276,620	+		PFLU_RS14660	0.42	-0.5
3,276,620	+		PFLU_RS14660	0.42	-0.9
3,276,620	+		PFLU_RS14660	0.42	-0.3
3,276,620	+		PFLU_RS14660	0.42	-0.3
3,276,620	+		PFLU_RS14660	0.42	-0.4
3,276,620	+		PFLU_RS14660	0.42	+0.6
3,276,620	+		PFLU_RS14660	0.42	+0.3
3,276,620	+		PFLU_RS14660	0.42	+0.4
3,276,620	+		PFLU_RS14660	0.42	-1.6
3,276,620	+		PFLU_RS14660	0.42	+0.3
3,276,620	+		PFLU_RS14660	0.42	+1.1
3,276,620	+		PFLU_RS14660	0.42	+2.0
3,276,620	+		PFLU_RS14660	0.42	-0.8
3,276,620	+		PFLU_RS14660	0.42	+0.9
3,276,620	+		PFLU_RS14660	0.42	+0.5
3,276,621	-		PFLU_RS14660	0.42	-0.2
3,276,621	-		PFLU_RS14660	0.42	+0.0
3,276,621	-		PFLU_RS14660	0.42	+0.1
3,276,621	-		PFLU_RS14660	0.42	+1.7
3,276,621	-		PFLU_RS14660	0.42	-0.9
3,276,621	-		PFLU_RS14660	0.42	+0.1
3,276,621	-		PFLU_RS14660	0.42	-0.4
3,276,621	-		PFLU_RS14660	0.42	+0.7
3,276,621	-		PFLU_RS14660	0.42	+0.1
3,276,621	-		PFLU_RS14660	0.42	-1.4
3,276,621	-		PFLU_RS14660	0.42	+0.3
3,276,621	-		PFLU_RS14660	0.42	-0.9
3,276,621	-		PFLU_RS14660	0.42	+0.9
3,276,621	-		PFLU_RS14660	0.42	+0.2
3,276,621	-		PFLU_RS14660	0.42	-0.2
3,276,626	+		PFLU_RS14660	0.43	+0.8
3,276,626	+		PFLU_RS14660	0.43	+1.7
3,276,626	+		PFLU_RS14660	0.43	+0.7
3,276,626	+		PFLU_RS14660	0.43	-0.7
3,276,626	+		PFLU_RS14660	0.43	+1.3
3,276,627	-		PFLU_RS14660	0.43	-0.4
3,276,627	-		PFLU_RS14660	0.43	+1.1
3,276,728	+		PFLU_RS14660	0.55	-0.5
3,276,729	-		PFLU_RS14660	0.55	-0.8
3,276,729	-		PFLU_RS14660	0.55	+0.7
3,276,729	-		PFLU_RS14660	0.55	+0.1
3,276,992	+		PFLU_RS14660	0.85	+0.6
3,276,992	+		PFLU_RS14660	0.85	+1.1
3,276,993	-		PFLU_RS14660	0.85	+0.4
3,276,993	-		PFLU_RS14660	0.85	-0.1
3,277,075	+				+0.8
3,277,075	+				-0.3
3,277,075	+				-0.9
3,277,075	+				-1.4
3,277,075	+				-0.6
3,277,075	+				+0.6
3,277,075	+				-0.6
3,277,075	+				+0.6
3,277,075	+				-0.5
3,277,075	+				-0.3
3,277,075	+				-0.2
3,277,075	+				+0.6
3,277,075	+				+0.4
3,277,076	-				-0.4
3,277,076	-				-0.3
3,277,076	-				+1.3
3,277,076	-				-0.4
3,277,076	-				+1.1
3,277,076	-				-2.1
3,277,076	-				-0.1
3,277,076	-				-0.1
3,277,076	-				-1.4
3,277,076	-				-1.4
3,277,076	-				+0.9
3,277,094	-				+0.2
3,277,140	+				-1.6
3,277,140	+				-2.0
3,277,140	+				-0.5
3,277,140	+				-1.3
3,277,140	+				-2.3
3,277,140	+				-3.1
3,277,141	-				+0.1
3,277,141	-				-3.4
3,277,141	-				-2.4
3,277,141	-				-3.7
3,277,141	-				-2.9
3,277,229	+				-0.8
3,277,230	-				-0.6
3,277,292	+				-2.2
3,277,292	+				-2.1
3,277,292	+				+0.4
3,277,292	+				-1.6
3,277,292	+				-2.7
3,277,293	-				-2.6
3,277,293	-				-2.4
3,277,293	-				-1.9
3,277,358	+		PFLU_RS14665	0.13	-0.9
3,277,358	+		PFLU_RS14665	0.13	-1.4
3,277,358	+		PFLU_RS14665	0.13	-1.7
3,277,358	+		PFLU_RS14665	0.13	-1.8
3,277,358	+		PFLU_RS14665	0.13	-0.1
3,277,358	+		PFLU_RS14665	0.13	-0.7
3,277,358	+		PFLU_RS14665	0.13	-0.4
3,277,358	+		PFLU_RS14665	0.13	-0.3
3,277,358	+		PFLU_RS14665	0.13	-0.3
3,277,359	-		PFLU_RS14665	0.13	-1.4
3,277,359	-		PFLU_RS14665	0.13	-2.9
3,277,567	+		PFLU_RS14665	0.35	-2.2
3,277,567	+		PFLU_RS14665	0.35	-1.6
3,277,567	+		PFLU_RS14665	0.35	-1.1
3,277,567	+		PFLU_RS14665	0.35	+0.1
3,277,567	+		PFLU_RS14665	0.35	-1.6
3,277,567	+		PFLU_RS14665	0.35	-0.6
3,277,567	+		PFLU_RS14665	0.35	-0.7
3,277,567	+		PFLU_RS14665	0.35	-1.0
3,277,568	-		PFLU_RS14665	0.35	-0.0
3,277,568	-		PFLU_RS14665	0.35	-2.3
3,277,568	-		PFLU_RS14665	0.35	-1.7
3,277,890	+		PFLU_RS14665	0.68	-0.1
3,277,890	+		PFLU_RS14665	0.68	+0.7
3,277,890	+		PFLU_RS14665	0.68	-0.1
3,277,890	+		PFLU_RS14665	0.68	+0.4
3,277,891	-		PFLU_RS14665	0.68	+0.5
3,277,891	-		PFLU_RS14665	0.68	-2.6
3,277,891	-		PFLU_RS14665	0.68	+0.1
3,277,891	-		PFLU_RS14665	0.68	-0.1
3,277,891	-		PFLU_RS14665	0.68	-1.4
3,277,891	-		PFLU_RS14665	0.68	-0.4
3,277,976	+		PFLU_RS14665	0.77	-1.1
3,277,976	+		PFLU_RS14665	0.77	-0.5
3,277,977	-		PFLU_RS14665	0.77	+1.1
3,277,977	-		PFLU_RS14665	0.77	-1.9
3,277,977	-		PFLU_RS14665	0.77	-1.9
3,277,977	-		PFLU_RS14665	0.77	-0.9
3,277,977	-		PFLU_RS14665	0.77	-1.8
3,277,977	-		PFLU_RS14665	0.77	+1.1
3,278,286	+				-0.9
3,278,286	+				+0.3
3,278,287	-				+0.7
3,278,398	+				-0.3
3,278,398	+				+1.7
3,278,398	+				-0.3
3,278,399	-				-1.1
3,278,511	-		PFLU_RS14670	0.14	-3.4
3,278,511	-		PFLU_RS14670	0.14	-0.8
3,278,511	-		PFLU_RS14670	0.14	-1.6
3,278,511	-		PFLU_RS14670	0.14	-3.0
3,278,511	-		PFLU_RS14670	0.14	-2.0
3,278,511	-		PFLU_RS14670	0.14	-3.1
3,278,607	+		PFLU_RS14670	0.33	+0.9
3,278,663	+		PFLU_RS14670	0.44	-1.5
3,278,664	-		PFLU_RS14670	0.44	+0.6
3,278,813	+		PFLU_RS14670	0.73	+0.7
3,278,813	+		PFLU_RS14670	0.73	-1.6
3,278,813	+		PFLU_RS14670	0.73	-1.4
3,278,814	-		PFLU_RS14670	0.73	-1.6
3,278,814	-		PFLU_RS14670	0.73	-0.3
3,279,110	+		PFLU_RS14675	0.24	-0.4
3,279,111	-		PFLU_RS14675	0.24	-0.2
3,279,111	-		PFLU_RS14675	0.24	+2.1
3,279,158	+		PFLU_RS14675	0.30	+0.6
3,279,158	+		PFLU_RS14675	0.30	+1.1
3,279,158	+		PFLU_RS14675	0.30	+0.5
3,279,158	+		PFLU_RS14675	0.30	+0.9
3,279,158	+		PFLU_RS14675	0.30	-0.3
3,279,158	+		PFLU_RS14675	0.30	-2.0
3,279,158	+		PFLU_RS14675	0.30	+0.4
3,279,158	+		PFLU_RS14675	0.30	-2.1
3,279,159	-		PFLU_RS14675	0.31	+0.3
3,279,159	-		PFLU_RS14675	0.31	+0.5
3,279,159	-		PFLU_RS14675	0.31	-0.3
3,279,159	-		PFLU_RS14675	0.31	-0.0