Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS07645

Experiment: malate (C) and Ammonium chloride (N); with MOPS; with PEG

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	malate (C) and Ammonium chloride (N); with MOPS; with PEG
1,698,881	+		PFLU_RS07635	0.89	+0.3
1,698,881	+		PFLU_RS07635	0.89	+1.8
1,698,881	+		PFLU_RS07635	0.89	+0.2
1,698,881	+		PFLU_RS07635	0.89	-0.2
1,698,881	+		PFLU_RS07635	0.89	+0.7
1,698,881	+		PFLU_RS07635	0.89	+0.7
1,698,881	+		PFLU_RS07635	0.89	-0.6
1,698,881	+		PFLU_RS07635	0.89	-0.3
1,698,882	-		PFLU_RS07635	0.89	-0.7
1,698,882	-		PFLU_RS07635	0.89	-0.5
1,698,882	-		PFLU_RS07635	0.89	+0.5
1,698,882	-		PFLU_RS07635	0.89	-0.5
1,698,882	-		PFLU_RS07635	0.89	+0.0
1,698,882	-		PFLU_RS07635	0.89	-0.3
1,698,980	+				-0.3
1,698,980	+				+0.4
1,698,980	+				+0.4
1,698,980	+				+1.4
1,698,981	-				-0.3
1,698,981	-				-0.2
1,698,981	-				+0.2
1,699,100	+				+0.2
1,699,100	+				+0.5
1,699,269	+				+0.3
1,699,269	+				-0.9
1,699,269	+				-0.2
1,699,269	+				+0.5
1,699,270	-				-0.2
1,699,270	-				-0.6
1,699,270	-				-1.8
1,699,270	-				+0.5
1,699,270	-				+1.1
1,699,322	+		PFLU_RS07640	0.12	+1.1
1,699,322	+		PFLU_RS07640	0.12	-0.3
1,699,322	+		PFLU_RS07640	0.12	-0.1
1,699,322	+		PFLU_RS07640	0.12	+0.4
1,699,322	+		PFLU_RS07640	0.12	-1.1
1,699,322	+		PFLU_RS07640	0.12	+1.8
1,699,322	+		PFLU_RS07640	0.12	-1.5
1,699,322	+		PFLU_RS07640	0.12	-1.6
1,699,322	+		PFLU_RS07640	0.12	-1.2
1,699,322	+		PFLU_RS07640	0.12	+0.6
1,699,322	+		PFLU_RS07640	0.12	+1.3
1,699,322	+		PFLU_RS07640	0.12	+0.3
1,699,322	+		PFLU_RS07640	0.12	-1.8
1,699,322	+		PFLU_RS07640	0.12	+0.1
1,699,322	+		PFLU_RS07640	0.12	+0.3
1,699,322	+		PFLU_RS07640	0.12	-1.5
1,699,322	+		PFLU_RS07640	0.12	+0.1
1,699,322	+		PFLU_RS07640	0.12	+0.1
1,699,322	+		PFLU_RS07640	0.12	+0.4
1,699,322	+		PFLU_RS07640	0.12	+0.4
1,699,322	+		PFLU_RS07640	0.12	-1.3
1,699,322	+		PFLU_RS07640	0.12	-1.6
1,699,322	+		PFLU_RS07640	0.12	+0.2
1,699,322	+		PFLU_RS07640	0.12	+1.0
1,699,322	+		PFLU_RS07640	0.12	-0.3
1,699,322	+		PFLU_RS07640	0.12	+0.6
1,699,322	+		PFLU_RS07640	0.12	-0.0
1,699,322	+		PFLU_RS07640	0.12	-0.2
1,699,322	+		PFLU_RS07640	0.12	-0.8
1,699,323	-		PFLU_RS07640	0.12	-0.8
1,699,323	-		PFLU_RS07640	0.12	+0.7
1,699,323	-		PFLU_RS07640	0.12	+0.4
1,699,323	-		PFLU_RS07640	0.12	+0.3
1,699,323	-		PFLU_RS07640	0.12	-1.8
1,699,323	-		PFLU_RS07640	0.12	-1.2
1,699,323	-		PFLU_RS07640	0.12	-0.6
1,699,323	-		PFLU_RS07640	0.12	+1.1
1,699,323	-		PFLU_RS07640	0.12	+0.4
1,699,323	-		PFLU_RS07640	0.12	-1.0
1,699,323	-		PFLU_RS07640	0.12	-0.2
1,699,323	-		PFLU_RS07640	0.12	+0.2
1,699,323	-		PFLU_RS07640	0.12	+1.2
1,699,323	-		PFLU_RS07640	0.12	-3.1
1,699,323	-		PFLU_RS07640	0.12	-0.8
1,699,323	-		PFLU_RS07640	0.12	-1.1
1,699,323	-		PFLU_RS07640	0.12	+0.4
1,699,323	-		PFLU_RS07640	0.12	-0.6
1,699,323	-		PFLU_RS07640	0.12	+1.0
1,699,323	-		PFLU_RS07640	0.12	+1.3
1,699,323	-		PFLU_RS07640	0.12	-0.6
1,699,323	-		PFLU_RS07640	0.12	+1.2
1,699,323	-		PFLU_RS07640	0.12	+0.4
1,699,323	-		PFLU_RS07640	0.12	-0.5
1,699,336	+		PFLU_RS07640	0.15	+0.6
1,699,347	-		PFLU_RS07640	0.18	+1.0
1,699,347	-		PFLU_RS07640	0.18	+0.1
1,699,443	+		PFLU_RS07640	0.40	+0.3
1,699,443	+		PFLU_RS07640	0.40	-0.8
1,699,443	+		PFLU_RS07640	0.40	-0.6
1,699,443	+		PFLU_RS07640	0.40	-0.2
1,699,444	-		PFLU_RS07640	0.40	+0.7
1,699,444	-		PFLU_RS07640	0.40	-0.8
1,699,444	-		PFLU_RS07640	0.40	-1.0
1,699,444	-		PFLU_RS07640	0.40	+0.6
1,699,444	-		PFLU_RS07640	0.40	-1.4
1,699,444	-		PFLU_RS07640	0.40	-0.8
1,699,480	-		PFLU_RS07640	0.48	-0.7
1,699,693	+				+1.1
1,699,693	+				-0.7
1,699,693	+				+0.5
1,699,693	+				+0.7
1,699,693	+				-0.6
1,699,693	+				+0.6
1,699,693	+				-0.3
1,699,693	+				-0.3
1,699,694	-				+0.2
1,699,694	-				-1.3
1,699,694	-				-0.5
1,699,694	-				-1.6
1,699,694	-				-1.8
1,699,694	-				-0.2
1,699,694	-				-0.1
1,699,694	-				+0.2
1,699,694	-				+0.1
1,699,701	+				-0.2
1,699,701	+				+0.7
1,699,702	-				-3.0
1,699,734	+				-1.0
1,699,734	+				-0.5
1,699,734	+				+0.3
1,699,735	-				+0.3
1,699,735	-				-0.2
1,699,735	-				-0.5
1,699,735	-				+0.7
1,699,735	-				+0.5
1,699,735	-				+0.8
1,699,743	+				+0.2
1,699,793	+				-1.3
1,699,793	+				-1.5
1,699,793	+				-0.2
1,699,793	+				+0.2
1,699,794	-				-0.3
1,699,794	-				+1.2
1,699,807	+				+0.7
1,699,807	+				+0.2
1,699,807	+				-0.2
1,699,807	+				+0.5
1,699,807	+				-1.0
1,699,808	-				+1.7
1,699,808	-				-0.3
1,699,808	-				-1.0
1,699,808	-				-0.6
1,699,808	-				-1.0
1,699,808	-				+0.8
1,699,808	-				-1.0
1,699,808	-				-0.3
1,699,813	+				-0.4
1,699,813	+				-2.1
1,699,813	+				+1.3
1,699,813	+				-0.2
1,699,813	+				+0.2
1,699,813	+				-1.6
1,699,813	+				-0.4
1,699,813	+				+1.6
1,699,813	+				-0.5
1,699,813	+				+0.6
1,699,813	+				-1.8
1,699,813	+				+0.1
1,699,813	+				-0.3
1,699,813	+				+1.1
1,699,813	+				-0.0
1,699,813	+				+0.4
1,699,813	+				-0.5
1,699,813	+				+0.4
1,699,813	+				+0.5
1,699,813	+				+1.5
1,699,813	+				+1.5
1,699,813	+				+0.6
1,699,813	+				-0.0
1,699,813	+				+0.2
1,699,813	+				+0.3
1,699,813	+				-0.6
1,699,813	+				+0.2
1,699,813	+				-0.1
1,699,813	+				+0.5
1,699,813	+				+0.8
1,699,813	+				-0.6
1,699,814	-				-0.8
1,699,814	-				-1.0
1,699,814	-				+1.4
1,699,814	-				-1.1
1,699,814	-				+0.1
1,699,814	-				+1.8
1,699,814	-				-0.1
1,699,814	-				-2.2
1,699,814	-				-0.1
1,699,814	-				+0.6
1,699,814	-				+0.1
1,699,814	-				-0.3
1,699,814	-				+0.6
1,699,814	-				-0.3
1,699,814	-				-0.1
1,699,814	-				+1.0
1,699,814	-				-0.7
1,699,814	-				+1.4
1,699,814	-				+0.0
1,699,814	-				+0.8
1,699,814	-				+0.2
1,699,814	-				-2.2
1,699,814	-				-1.1
1,699,814	-				+0.5
1,699,814	-				-2.3
1,699,814	-				-0.5
1,699,814	-				-0.3
1,699,814	-				+1.1
1,699,828	-				-1.5
1,699,912	+		PFLU_RS07645	0.22	-2.1
1,700,006	+		PFLU_RS07645	0.44	+0.2
1,700,006	+		PFLU_RS07645	0.44	-1.0
1,700,049	-		PFLU_RS07645	0.54	+1.8
1,700,049	-		PFLU_RS07645	0.54	+0.2
1,700,049	-		PFLU_RS07645	0.54	-1.2
1,700,049	-		PFLU_RS07645	0.54	-1.2
1,700,147	+		PFLU_RS07645	0.76	-0.5
1,700,147	+		PFLU_RS07645	0.76	-0.2
1,700,147	+		PFLU_RS07645	0.76	+0.8
1,700,148	-		PFLU_RS07645	0.76	-1.2
1,700,148	-		PFLU_RS07645	0.76	-1.5
1,700,148	-		PFLU_RS07645	0.76	-0.8
1,700,183	+		PFLU_RS07645	0.84	-1.5
1,700,183	+		PFLU_RS07645	0.84	-0.3
1,700,183	+		PFLU_RS07645	0.84	+0.2
1,700,183	+		PFLU_RS07645	0.84	-2.2
1,700,183	+		PFLU_RS07645	0.84	-0.2
1,700,184	-		PFLU_RS07645	0.84	-1.2
1,700,184	-		PFLU_RS07645	0.84	-0.2
1,700,184	-		PFLU_RS07645	0.84	-2.1
1,700,184	-		PFLU_RS07645	0.84	+0.2
1,700,184	-		PFLU_RS07645	0.84	-0.5
1,700,184	-		PFLU_RS07645	0.84	-1.2
1,700,184	-		PFLU_RS07645	0.84	-1.2
1,700,263	+				-0.8
1,700,369	+				+0.8
1,700,369	+				-0.7
1,700,389	+				-0.4
1,700,390	-				-1.3
1,700,390	-				+0.4
1,700,390	-				+1.1
1,700,390	-				-0.4
1,700,400	+				-0.2
1,700,406	+				+0.7
1,700,407	-				-0.5
1,700,407	-				-0.8
1,700,407	-				-0.3
1,700,407	-				-1.4
1,700,431	+				-2.1
1,700,431	+				-1.3
1,700,432	-				+0.1
1,700,439	+				-0.6
1,700,567	+				-0.3
1,700,567	+				+0.6
1,700,600	+				+0.6
1,700,600	+				-0.5
1,700,600	+				-1.0
1,700,601	-				+0.4
1,700,601	-				+0.7
1,700,601	-				+0.6
1,700,601	-				+0.6
1,700,601	-				-0.5
1,700,601	-				-2.0
1,700,601	-				-0.8
1,700,601	-				+0.5
1,700,615	-				+0.2
1,700,699	+				-1.7
1,700,699	+				+0.5
1,700,699	+				+1.4
1,700,699	+				+0.6
1,700,699	+				-0.1
1,700,699	+				-1.3
1,700,699	+				-0.8
1,700,699	+				+0.1
1,700,700	-				+0.4
1,700,700	-				+0.8
1,700,700	-				-1.0
1,700,700	-				-0.5
1,700,700	-				+0.8
1,700,716	-				-0.6
1,700,739	+				+0.2
1,700,739	+				+0.8
1,700,739	+				-3.8
1,700,739	+				-0.5
1,700,739	+				-0.8
1,700,739	+				-0.1
1,700,739	+				-1.2
1,700,739	+				+0.2
1,700,739	+				+0.8
1,700,740	-				-0.3
1,700,740	-				-0.2
1,700,740	-				+0.6
1,700,740	-				+0.2
1,700,740	-				-0.2
1,700,740	-				-0.7
1,700,740	-				+0.4
1,700,747	+				+0.8
1,700,747	+				-2.0
1,700,747	+				-0.2
1,700,747	+				-0.1
1,700,747	+				+0.7
1,700,747	+				+2.4
1,700,748	-				-1.0
1,700,748	-				-1.0
1,700,748	-				-0.1
1,700,748	-				+0.6
1,700,836	+				+1.5
1,700,837	-				+1.1
1,700,837	-				-0.3
1,700,837	-				+0.0
1,700,863	+				+0.1
1,700,863	+				-0.5
1,700,863	+				+0.7
1,701,043	+		PFLU_RS07650	0.14	-0.5
1,701,044	-		PFLU_RS07650	0.14	-0.0
1,701,168	+		PFLU_RS07650	0.20	-0.1
1,701,168	+		PFLU_RS07650	0.20	-0.6
1,701,168	+		PFLU_RS07650	0.20	+1.2
1,701,168	+		PFLU_RS07650	0.20	-0.0
1,701,168	+		PFLU_RS07650	0.20	+0.0
1,701,169	-		PFLU_RS07650	0.20	-0.4
1,701,169	-		PFLU_RS07650	0.20	-0.4
1,701,169	-		PFLU_RS07650	0.20	+0.1
1,701,169	-		PFLU_RS07650	0.20	+0.7
1,701,169	-		PFLU_RS07650	0.20	-0.8
1,701,169	-		PFLU_RS07650	0.20	+0.8
1,701,169	-		PFLU_RS07650	0.20	+0.3
1,701,169	-		PFLU_RS07650	0.20	+0.8
1,701,169	-		PFLU_RS07650	0.20	+0.4