Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c25590

Experiment: Carbon source D-Glucose 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source D-Glucose 10 mM
2,665,158	+				+0.1
2,665,166	-				-0.5
2,665,167	-				-0.3
2,665,202	-				+0.3
2,665,276	-		PGA1_c25580	0.16	+0.1
2,665,282	-		PGA1_c25580	0.16	+0.5
2,665,295	+		PGA1_c25580	0.18	+0.8
2,665,386	-		PGA1_c25580	0.27	-0.7
2,665,389	+		PGA1_c25580	0.27	-0.4
2,665,399	+		PGA1_c25580	0.28	-0.0
2,665,468	+		PGA1_c25580	0.34	-0.6
2,665,468	-		PGA1_c25580	0.34	-0.7
2,665,476	-		PGA1_c25580	0.35	-1.8
2,665,476	-		PGA1_c25580	0.35	+0.5
2,665,544	+		PGA1_c25580	0.42	-0.3
2,665,554	-		PGA1_c25580	0.43	-0.4
2,665,558	+		PGA1_c25580	0.43	-0.3
2,665,559	+		PGA1_c25580	0.43	-0.6
2,665,566	-		PGA1_c25580	0.44	-0.5
2,665,587	+		PGA1_c25580	0.46	-1.4
2,665,592	+		PGA1_c25580	0.47	-1.4
2,665,592	+		PGA1_c25580	0.47	-2.4
2,665,592	+		PGA1_c25580	0.47	+0.8
2,665,592	+		PGA1_c25580	0.47	-0.4
2,665,592	+		PGA1_c25580	0.47	-1.0
2,665,592	+		PGA1_c25580	0.47	-0.4
2,665,592	+		PGA1_c25580	0.47	-2.5
2,665,592	+		PGA1_c25580	0.47	+0.7
2,665,600	-		PGA1_c25580	0.47	+0.0
2,665,600	-		PGA1_c25580	0.47	+0.5
2,665,600	-		PGA1_c25580	0.47	+0.0
2,665,600	-		PGA1_c25580	0.47	-0.9
2,665,600	-		PGA1_c25580	0.47	-0.4
2,665,600	-		PGA1_c25580	0.47	-0.3
2,665,600	-		PGA1_c25580	0.47	+1.6
2,665,600	-		PGA1_c25580	0.47	-0.3
2,665,600	-		PGA1_c25580	0.47	-0.3
2,665,616	+		PGA1_c25580	0.49	-0.4
2,665,616	+		PGA1_c25580	0.49	+0.9
2,665,624	-		PGA1_c25580	0.50	-2.4
2,665,624	-		PGA1_c25580	0.50	-1.0
2,665,624	-		PGA1_c25580	0.50	-0.3
2,665,682	+		PGA1_c25580	0.55	-1.0
2,665,682	+		PGA1_c25580	0.55	-1.3
2,665,682	+		PGA1_c25580	0.55	+0.9
2,665,682	+		PGA1_c25580	0.55	+1.2
2,665,682	+		PGA1_c25580	0.55	+1.3
2,665,682	+		PGA1_c25580	0.55	+0.1
2,665,682	+		PGA1_c25580	0.55	+1.1
2,665,682	+		PGA1_c25580	0.55	+0.0
2,665,682	+		PGA1_c25580	0.55	+0.2
2,665,682	+		PGA1_c25580	0.55	+1.0
2,665,689	-		PGA1_c25580	0.56	-1.3
2,665,690	-		PGA1_c25580	0.56	-0.4
2,665,690	-		PGA1_c25580	0.56	+0.3
2,665,690	-		PGA1_c25580	0.56	-1.1
2,665,690	-		PGA1_c25580	0.56	-0.1
2,665,690	-		PGA1_c25580	0.56	-0.2
2,665,690	-		PGA1_c25580	0.56	+0.5
2,665,690	-		PGA1_c25580	0.56	-1.1
2,665,690	-		PGA1_c25580	0.56	-0.4
2,665,690	-		PGA1_c25580	0.56	+2.0
2,665,696	-		PGA1_c25580	0.57	+1.2
2,665,706	-		PGA1_c25580	0.58	-1.7
2,665,706	-		PGA1_c25580	0.58	+1.5
2,665,715	-		PGA1_c25580	0.58	-1.8
2,665,715	-		PGA1_c25580	0.58	+0.5
2,665,715	-		PGA1_c25580	0.58	+0.2
2,665,743	+		PGA1_c25580	0.61	+0.6
2,665,814	-		PGA1_c25580	0.68	+0.4
2,665,845	-		PGA1_c25580	0.71	-0.2
2,665,854	+		PGA1_c25580	0.72	-0.1
2,665,862	-		PGA1_c25580	0.73	+0.4
2,665,862	-		PGA1_c25580	0.73	-1.5
2,665,879	+		PGA1_c25580	0.74	+0.2
2,665,887	+		PGA1_c25580	0.75	+1.3
2,665,907	-		PGA1_c25580	0.77	-0.0
2,665,917	-		PGA1_c25580	0.78	+0.6
2,665,917	-		PGA1_c25580	0.78	-0.0
2,665,917	-		PGA1_c25580	0.78	+1.2
2,665,917	-		PGA1_c25580	0.78	-0.5
2,665,934	-		PGA1_c25580	0.80	-0.2
2,665,958	-		PGA1_c25580	0.82	+0.5
2,665,996	+		PGA1_c25580	0.86	-2.2
2,666,000	-		PGA1_c25580	0.86	-2.3
2,666,000	-		PGA1_c25580	0.86	+0.3
2,666,008	+		PGA1_c25580	0.87	-0.3
2,666,025	+		PGA1_c25580	0.88	+0.7
2,666,025	+		PGA1_c25580	0.88	-1.4
2,666,081	+				-0.8
2,666,089	-				-0.3
2,666,105	+				-1.0
2,666,113	-				-0.4
2,666,113	-				+0.3
2,666,113	-				-0.1
2,666,113	-				-0.1
2,666,138	+				+1.2
2,666,211	-				+0.4
2,666,213	+				+1.0
2,666,217	+				-2.3
2,666,238	-				-1.1
2,666,276	+		PGA1_c25590	0.12	-2.4
2,666,298	-		PGA1_c25590	0.14	-0.8
2,666,309	-		PGA1_c25590	0.15	-0.2
2,666,355	+		PGA1_c25590	0.19	-0.9
2,666,358	-		PGA1_c25590	0.20	+0.2
2,666,363	-		PGA1_c25590	0.20	-0.2
2,666,365	+		PGA1_c25590	0.20	-1.0
2,666,481	-		PGA1_c25590	0.31	+0.2
2,666,512	+		PGA1_c25590	0.34	-0.8
2,666,520	-		PGA1_c25590	0.35	-1.0
2,666,520	-		PGA1_c25590	0.35	-0.9
2,666,567	-		PGA1_c25590	0.40	-0.2
2,666,582	-		PGA1_c25590	0.41	+0.6
2,666,583	-		PGA1_c25590	0.41	-2.0
2,666,588	-		PGA1_c25590	0.42	-0.5
2,666,607	+		PGA1_c25590	0.43	+0.1
2,666,607	+		PGA1_c25590	0.43	+0.4
2,666,615	-		PGA1_c25590	0.44	+0.8
2,666,615	-		PGA1_c25590	0.44	-0.0
2,666,615	-		PGA1_c25590	0.44	-2.0
2,666,647	+		PGA1_c25590	0.47	-1.7
2,666,655	-		PGA1_c25590	0.48	-1.0
2,666,655	-		PGA1_c25590	0.48	+0.8
2,666,671	+		PGA1_c25590	0.49	+0.6
2,666,679	-		PGA1_c25590	0.50	+0.9
2,666,689	+		PGA1_c25590	0.51	-2.0
2,666,782	+		PGA1_c25590	0.60	+0.0
2,666,797	+		PGA1_c25590	0.61	+0.2
2,666,805	-		PGA1_c25590	0.62	-1.6
2,666,805	-		PGA1_c25590	0.62	-0.8
2,666,805	-		PGA1_c25590	0.62	-1.2
2,666,807	+		PGA1_c25590	0.62	-1.4
2,666,828	-		PGA1_c25590	0.64	-0.6
2,666,828	-		PGA1_c25590	0.64	-2.2
2,666,828	-		PGA1_c25590	0.64	-0.6
2,666,872	+		PGA1_c25590	0.69	-0.1
2,666,900	+		PGA1_c25590	0.71	+1.3
2,666,908	-		PGA1_c25590	0.72	-1.4
2,666,917	-		PGA1_c25590	0.73	-0.1
2,666,972	+		PGA1_c25590	0.78	+0.2
2,667,016	-		PGA1_c25590	0.82	+0.3
2,667,051	-		PGA1_c25590	0.86	+0.6
2,667,056	-		PGA1_c25590	0.86	+0.9
2,667,089	+		PGA1_c25590	0.89	-0.9
2,667,097	-				+0.5
2,667,108	+				-0.3
2,667,108	+				-1.7
2,667,108	+				+0.8
2,667,116	-				+0.7
2,667,116	-				+1.5
2,667,116	-				-1.3
2,667,118	+				+0.2
2,667,172	-				+0.5
2,667,172	-				+0.9
2,667,220	-				-0.5
2,667,220	-				-1.0
2,667,248	+				+0.1
2,667,256	-				-1.0
2,667,256	-				+1.7
2,667,307	-				-1.3
2,667,313	-				+0.9
2,667,345	+				-2.5
2,667,391	-				+1.8
2,667,418	+				+1.8
2,667,418	+				+0.0
2,667,418	+				+0.1
2,667,418	+				+0.3
2,667,418	+				+1.1
2,667,418	+				-1.7
2,667,418	+				+1.2
2,667,418	+				-0.2
2,667,418	+				+1.5
2,667,418	+				-1.2
2,667,422	-				+0.8
2,667,424	+				-1.2
2,667,426	-				-0.2
2,667,426	-				+0.1
2,667,426	-				+1.0
2,667,426	-				+0.9
2,667,426	-				+1.3
2,667,426	-				-1.0
2,667,426	-				+0.1
2,667,426	-				-3.4
2,667,426	-				+0.9
2,667,426	-				-0.7
2,667,426	-				-0.5
2,667,426	-				-0.0
2,667,462	+				-2.4
2,667,470	-				+0.5
2,667,475	-				+1.0
2,667,482	-				-1.2
2,667,486	+				+0.8
2,667,496	+				+0.5
2,667,499	-				+1.1
2,667,504	+				+0.8
2,667,504	-				+0.2
2,667,529	+				-0.7
2,667,540	+				-0.2
2,667,548	-				+1.6
2,667,587	+				+0.7
2,667,589	-				-0.0
2,667,595	+				-0.6
2,667,595	+				+0.3
2,667,595	+				-1.9
2,667,595	+				+0.3
2,667,595	+				+0.9
2,667,595	+				+1.8
2,667,595	+				+0.7
2,667,603	-				-0.2
2,667,603	-				-0.4
2,667,603	-				-0.2
2,667,632	+				-0.6
2,667,641	+				-0.5
2,667,702	+				+2.0
2,667,702	+				-1.5
2,667,702	+				+0.8
2,667,709	+				-0.3
2,667,710	-				-0.8
2,667,712	+				-0.5
2,667,740	+				+0.2
2,667,740	+				+0.2
2,667,740	+				+0.1
2,667,740	+				-2.3
2,667,740	+				+1.2
2,667,740	+				+0.6
2,667,740	+				-0.2
2,667,740	+				+1.3
2,667,740	+				+1.2
2,667,748	-				-1.1
2,667,748	-				+0.1
2,667,748	-				-1.5
2,667,752	+				-0.8
2,667,752	+				+0.4
2,667,752	+				-1.7
2,667,752	+				-1.7
2,667,752	+				+1.0
2,667,760	-				+0.7
2,667,766	-				+1.4
2,667,768	-				+0.3
2,667,768	-				-0.7
2,667,768	-				-1.7
2,667,770	+				-0.7
2,667,770	+				-0.4
2,667,770	+				-0.6
2,667,770	+				-0.6
2,667,770	+				+0.4
2,667,777	-				-0.2
2,667,778	-				+0.7
2,667,778	-				-1.2
2,667,778	-				-1.5
2,667,778	-				+0.5
2,667,778	-				-0.1
2,667,778	-				-0.2
2,667,778	-				+1.1
2,667,778	-				+0.9
2,667,778	-				-2.5
2,667,778	-				+0.2
2,667,812	-				-1.2
2,667,858	+		PGA1_c25610	0.18	+0.9
2,667,866	-		PGA1_c25610	0.19	-2.2
2,667,866	-		PGA1_c25610	0.19	-1.4
2,667,876	+		PGA1_c25610	0.21	-1.1
2,667,902	-		PGA1_c25610	0.25	-0.1
2,667,955	-		PGA1_c25610	0.35	+0.8
2,667,964	+		PGA1_c25610	0.36	-2.4
2,667,970	+		PGA1_c25610	0.37	+0.7
2,667,981	+		PGA1_c25610	0.39	+0.0
2,667,981	+		PGA1_c25610	0.39	-0.9
2,667,993	+		PGA1_c25610	0.41	-2.0
2,667,993	+		PGA1_c25610	0.41	+0.4
2,668,015	-		PGA1_c25610	0.45	-0.6
2,668,015	-		PGA1_c25610	0.45	-0.1
2,668,030	+		PGA1_c25610	0.48	-0.4
2,668,062	+		PGA1_c25610	0.54	+1.5
2,668,082	-		PGA1_c25610	0.57	+0.2
2,668,161	-		PGA1_c25610	0.71	-1.9
2,668,161	-		PGA1_c25610	0.71	+0.2
2,668,170	+		PGA1_c25610	0.73	-1.0
2,668,180	+		PGA1_c25610	0.74	-0.7
2,668,192	+		PGA1_c25610	0.77	-0.1
2,668,200	-		PGA1_c25610	0.78	+0.6