Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c33240

Experiment: Carbon source L-Citrulline 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source L-Citrulline 5 mM
3,482,381	+		PGA1_c33230	0.14	+0.5
3,482,385	+		PGA1_c33230	0.15	+1.5
3,482,385	+		PGA1_c33230	0.15	+0.2
3,482,385	+		PGA1_c33230	0.15	-1.7
3,482,393	-		PGA1_c33230	0.16	-1.1
3,482,402	+		PGA1_c33230	0.17	-1.5
3,482,408	-		PGA1_c33230	0.17	-0.1
3,482,415	+		PGA1_c33230	0.18	+0.5
3,482,431	+		PGA1_c33230	0.20	-1.7
3,482,437	+		PGA1_c33230	0.20	-1.2
3,482,491	+		PGA1_c33230	0.26	-2.2
3,482,513	+		PGA1_c33230	0.29	+0.5
3,482,522	+		PGA1_c33230	0.29	-0.8
3,482,547	+		PGA1_c33230	0.32	-0.5
3,482,560	-		PGA1_c33230	0.34	-0.5
3,482,594	-		PGA1_c33230	0.37	-1.1
3,482,594	-		PGA1_c33230	0.37	-0.1
3,482,594	-		PGA1_c33230	0.37	-0.8
3,482,636	+		PGA1_c33230	0.42	-0.5
3,482,692	-		PGA1_c33230	0.48	-1.8
3,482,725	+		PGA1_c33230	0.51	+2.5
3,482,768	+		PGA1_c33230	0.56	+0.9
3,482,826	-		PGA1_c33230	0.62	+1.5
3,482,830	+		PGA1_c33230	0.62	-0.5
3,482,869	+		PGA1_c33230	0.67	-0.5
3,482,995	+		PGA1_c33230	0.80	-0.1
3,483,200	+				-2.4
3,483,200	-				-0.3
3,483,200	-				+0.9
3,483,203	-				-1.2
3,483,203	-				+0.9
3,483,215	-				+0.2
3,483,219	+				-1.1
3,483,227	-				+0.3
3,483,227	-				+1.5
3,483,227	-				-2.2
3,483,227	-				-0.8
3,483,247	+				+0.5
3,483,298	-		PGA1_c33240	0.14	-0.7
3,483,439	+		PGA1_c33240	0.36	-1.0
3,483,493	-		PGA1_c33240	0.44	+0.1
3,483,526	-		PGA1_c33240	0.49	-0.8
3,483,557	-		PGA1_c33240	0.54	-1.4
3,483,580	+		PGA1_c33240	0.58	-0.7
3,483,580	+		PGA1_c33240	0.58	-0.7
3,483,580	+		PGA1_c33240	0.58	-1.2
3,483,580	+		PGA1_c33240	0.58	-0.0
3,483,580	+		PGA1_c33240	0.58	-1.6
3,483,671	+		PGA1_c33240	0.72	-0.7
3,483,679	-		PGA1_c33240	0.73	+0.2
3,483,807	+				+0.9
3,483,851	+				-2.3
3,483,918	-		PGA1_c33250	0.34	-0.7
3,483,929	+		PGA1_c33250	0.40	-0.8
3,483,935	-		PGA1_c33250	0.43	-2.5
3,483,937	+		PGA1_c33250	0.43	-0.5
3,483,937	+		PGA1_c33250	0.43	-2.2
3,484,055	-				+1.0
3,484,102	-				-0.1
3,484,122	-				-0.4
3,484,161	+				+2.0