Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c32450

Experiment: Carbon source L-Citrulline 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source L-Citrulline 5 mM
3,401,919	+		PGA1_c32440	0.73	+1.5
3,401,927	-		PGA1_c32440	0.73	+0.4
3,401,927	-		PGA1_c32440	0.73	+0.4
3,401,978	+		PGA1_c32440	0.75	-0.5
3,401,993	+		PGA1_c32440	0.75	+0.1
3,402,001	-		PGA1_c32440	0.76	-0.4
3,402,004	+		PGA1_c32440	0.76	-0.1
3,402,074	-		PGA1_c32440	0.78	-0.2
3,402,183	+		PGA1_c32440	0.82	+1.5
3,402,213	+		PGA1_c32440	0.83	-0.3
3,402,215	-		PGA1_c32440	0.84	-1.3
3,402,225	+		PGA1_c32440	0.84	+0.9
3,402,257	-		PGA1_c32440	0.85	-1.4
3,402,267	-		PGA1_c32440	0.85	-0.3
3,402,310	+		PGA1_c32440	0.87	-0.8
3,402,318	-		PGA1_c32440	0.87	+0.6
3,402,318	-		PGA1_c32440	0.87	-3.1
3,402,348	-		PGA1_c32440	0.88	+0.1
3,402,365	-		PGA1_c32440	0.89	-1.2
3,402,469	-				+0.1
3,402,504	+				-1.4
3,402,521	+				+0.2
3,402,521	+				-0.9
3,402,521	+				+0.9
3,402,594	-				+0.1
3,402,596	+				-0.9
3,402,597	-				-0.5
3,402,638	+				-0.2
3,402,646	-				+0.5
3,402,646	-				+0.8
3,402,660	-				-0.9
3,402,679	+				-0.5
3,402,685	-				-1.0
3,402,725	+				+1.1
3,402,725	+				-1.3
3,402,725	+				+1.5
3,402,725	+				+0.9
3,402,733	-				+0.5
3,402,733	-				+1.2
3,402,733	-				+0.2
3,402,733	-				+0.1
3,402,733	-				-0.5
3,402,761	-				-0.3
3,402,763	+				-1.5
3,402,808	+				-0.5
3,402,834	-				+1.1
3,402,860	-				+0.7
3,402,867	-				+0.7
3,402,867	-				+1.5
3,402,867	-				+0.1
3,402,867	-				-0.4
3,402,867	-				-0.3
3,402,871	+				+0.5
3,402,882	+				+1.2
3,402,890	-				+1.2
3,402,897	+				-0.5
3,402,927	-				-1.0
3,403,044	+		PGA1_c32450	0.19	-2.0
3,403,068	+		PGA1_c32450	0.23	-1.7
3,403,076	-		PGA1_c32450	0.24	-2.5
3,403,077	-		PGA1_c32450	0.24	-1.6
3,403,123	+		PGA1_c32450	0.30	-2.7
3,403,171	+		PGA1_c32450	0.37	-2.4
3,403,283	+		PGA1_c32450	0.52	-2.6
3,403,288	+		PGA1_c32450	0.53	-1.2
3,403,289	-		PGA1_c32450	0.53	-1.4
3,403,289	-		PGA1_c32450	0.53	-1.9
3,403,298	-		PGA1_c32450	0.54	-3.3
3,403,330	-		PGA1_c32450	0.58	-1.7
3,403,347	-		PGA1_c32450	0.61	-3.3
3,403,358	-		PGA1_c32450	0.62	-1.8
3,403,444	-		PGA1_c32450	0.74	-0.5
3,403,463	+		PGA1_c32450	0.77	-0.9
3,403,473	-		PGA1_c32450	0.78	-1.1
3,403,481	+		PGA1_c32450	0.79	-1.7
3,403,543	+		PGA1_c32450	0.87	-1.9
3,403,602	+				-2.5
3,403,606	+				-1.0
3,403,620	+				-2.3
3,403,651	+				-0.7
3,403,651	+				-0.4
3,403,678	+				+0.4
3,403,678	+				-0.3
3,403,686	+				+2.5
3,403,694	-				-0.3
3,403,733	+				+0.1
3,403,748	-				+0.1
3,403,821	+				-0.1
3,403,823	-				+0.8
3,403,837	+				+0.2
3,403,855	-				-0.4
3,403,865	-				+1.4
3,403,865	-				+0.5
3,403,914	+				+1.5
3,403,922	-				+0.5
3,403,922	-				+0.1
3,403,932	-				+0.2
3,403,958	+				+0.0
3,404,008	+				-1.7
3,404,016	-				+0.1
3,404,016	-				-0.0
3,404,016	-				+1.1
3,404,016	-				+0.6
3,404,016	-				+0.4
3,404,016	-				+1.1
3,404,030	-				+0.1
3,404,039	-				-0.9
3,404,068	+				+0.1
3,404,167	-				+0.8
3,404,167	-				+0.6
3,404,230	-		PGA1_c32460	0.24	-0.1
3,404,239	+		PGA1_c32460	0.26	-1.0
3,404,247	-		PGA1_c32460	0.28	+0.8
3,404,247	-		PGA1_c32460	0.28	-0.4
3,404,247	-		PGA1_c32460	0.28	+1.3
3,404,315	+		PGA1_c32460	0.44	-0.1
3,404,315	+		PGA1_c32460	0.44	-0.5
3,404,315	+		PGA1_c32460	0.44	-0.2
3,404,323	-		PGA1_c32460	0.46	+0.5
3,404,323	-		PGA1_c32460	0.46	+0.7
3,404,323	-		PGA1_c32460	0.46	-0.2
3,404,323	-		PGA1_c32460	0.46	+0.6
3,404,395	-		PGA1_c32460	0.63	+1.7
3,404,397	+		PGA1_c32460	0.64	+0.5
3,404,397	+		PGA1_c32460	0.64	-0.6
3,404,397	+		PGA1_c32460	0.64	+1.1
3,404,397	+		PGA1_c32460	0.64	-0.1
3,404,397	+		PGA1_c32460	0.64	+0.5
3,404,405	-		PGA1_c32460	0.66	-1.3
3,404,405	-		PGA1_c32460	0.66	-2.6
3,404,405	-		PGA1_c32460	0.66	+0.6
3,404,405	-		PGA1_c32460	0.66	-0.6
3,404,480	+		PGA1_c32460	0.84	-0.4
3,404,480	+		PGA1_c32460	0.84	+0.4
3,404,502	+		PGA1_c32460	0.89	-1.1
3,404,526	+				-0.1
3,404,552	+				+0.4
3,404,555	-				+1.1
3,404,578	+				-0.5