Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c23310

Experiment: Carbon source L-Citrulline 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source L-Citrulline 5 mM
2,420,572	-		PGA1_c23300	0.61	+0.4
2,420,613	-		PGA1_c23300	0.63	-1.0
2,420,615	+		PGA1_c23300	0.63	+0.4
2,420,618	-		PGA1_c23300	0.63	+0.7
2,420,677	-		PGA1_c23300	0.66	+0.8
2,420,776	-		PGA1_c23300	0.70	+0.5
2,420,784	-		PGA1_c23300	0.70	+0.9
2,420,808	+		PGA1_c23300	0.71	+0.5
2,420,816	-		PGA1_c23300	0.71	-1.8
2,420,816	-		PGA1_c23300	0.71	+0.8
2,420,826	-		PGA1_c23300	0.72	+0.3
2,420,834	+		PGA1_c23300	0.72	-0.2
2,420,938	+		PGA1_c23300	0.76	-0.8
2,420,975	+		PGA1_c23300	0.78	+0.2
2,420,985	+		PGA1_c23300	0.78	-0.7
2,421,022	+		PGA1_c23300	0.80	+0.3
2,421,024	+		PGA1_c23300	0.80	-2.2
2,421,025	-		PGA1_c23300	0.80	-0.2
2,421,032	+		PGA1_c23300	0.80	+0.7
2,421,040	-		PGA1_c23300	0.80	-0.4
2,421,042	+		PGA1_c23300	0.80	+0.1
2,421,154	+		PGA1_c23300	0.85	-2.5
2,421,162	-		PGA1_c23300	0.85	-1.8
2,421,191	+		PGA1_c23300	0.87	-0.3
2,421,191	+		PGA1_c23300	0.87	+1.6
2,421,217	-		PGA1_c23300	0.88	+1.0
2,421,219	-		PGA1_c23300	0.88	-2.6
2,421,285	-				+0.0
2,421,285	-				-0.4
2,421,345	+				-0.5
2,421,353	+				+1.0
2,421,397	-				-0.8
2,421,469	+				+1.0
2,421,475	-				-1.1
2,421,496	+				+1.0
2,421,504	-				-0.3
2,421,506	+				-1.4
2,421,532	-				-0.2
2,421,560	+				+0.2
2,421,560	+				+0.4
2,421,560	+				+0.5
2,421,568	-				-0.4
2,421,568	-				-0.1
2,421,592	-				-0.1
2,421,592	-				-1.1
2,421,630	+				-0.1
2,421,630	+				-0.4
2,421,638	+				+1.7
2,421,638	-				-0.1
2,421,638	-				-0.5
2,421,683	+		PGA1_c23310	0.13	+1.2
2,421,691	-		PGA1_c23310	0.13	-3.0
2,421,716	-		PGA1_c23310	0.16	+0.1
2,421,778	-		PGA1_c23310	0.22	-1.4
2,421,783	-		PGA1_c23310	0.22	-2.0
2,421,807	-		PGA1_c23310	0.24	+0.8
2,421,832	+		PGA1_c23310	0.27	-0.0
2,421,850	-		PGA1_c23310	0.29	+0.3
2,421,886	-		PGA1_c23310	0.32	+0.1
2,421,904	-		PGA1_c23310	0.34	-1.0
2,421,909	-		PGA1_c23310	0.34	-0.1
2,421,909	-		PGA1_c23310	0.34	-0.1
2,421,934	-		PGA1_c23310	0.37	-0.2
2,422,016	+		PGA1_c23310	0.44	-0.4
2,422,026	+		PGA1_c23310	0.45	-0.8
2,422,034	-		PGA1_c23310	0.46	-1.0
2,422,034	-		PGA1_c23310	0.46	-0.8
2,422,034	-		PGA1_c23310	0.46	-1.0
2,422,054	-		PGA1_c23310	0.48	-0.3
2,422,054	-		PGA1_c23310	0.48	+0.2
2,422,055	+		PGA1_c23310	0.48	+1.1
2,422,060	+		PGA1_c23310	0.49	-1.0
2,422,060	+		PGA1_c23310	0.49	-0.9
2,422,060	+		PGA1_c23310	0.49	+0.0
2,422,068	-		PGA1_c23310	0.49	-1.8
2,422,068	-		PGA1_c23310	0.49	-2.8
2,422,068	-		PGA1_c23310	0.49	+0.2
2,422,138	-		PGA1_c23310	0.56	+1.4
2,422,177	+		PGA1_c23310	0.60	-1.8
2,422,177	+		PGA1_c23310	0.60	+1.1
2,422,183	+		PGA1_c23310	0.60	+0.2
2,422,185	-		PGA1_c23310	0.60	+0.6
2,422,185	-		PGA1_c23310	0.60	+0.1
2,422,207	-		PGA1_c23310	0.63	+0.4
2,422,256	+		PGA1_c23310	0.67	-1.0
2,422,264	-		PGA1_c23310	0.68	+0.4
2,422,266	+		PGA1_c23310	0.68	+0.4
2,422,295	-		PGA1_c23310	0.71	+1.1
2,422,327	-		PGA1_c23310	0.74	-1.2
2,422,403	-		PGA1_c23310	0.81	-0.4
2,422,531	+				+1.6
2,422,539	-				-0.5
2,422,565	+				+1.2
2,422,612	+				-0.7
2,422,630	+				+1.4
2,422,635	+				+0.7
2,422,643	-				+0.8
2,422,760	-		PGA1_c23320	0.17	+0.1
2,422,899	+		PGA1_c23320	0.35	+0.5
2,422,976	-		PGA1_c23320	0.44	-1.5
2,422,978	+		PGA1_c23320	0.44	-0.4
2,422,984	+		PGA1_c23320	0.45	+0.0
2,422,986	-		PGA1_c23320	0.45	-0.4
2,422,988	+		PGA1_c23320	0.46	-0.8
2,423,001	+		PGA1_c23320	0.47	-1.6
2,423,009	-		PGA1_c23320	0.48	-0.3
2,423,031	+		PGA1_c23320	0.51	-0.7
2,423,031	+		PGA1_c23320	0.51	+2.4
2,423,039	-		PGA1_c23320	0.52	+0.2
2,423,039	-		PGA1_c23320	0.52	+0.1
2,423,039	-		PGA1_c23320	0.52	+0.7
2,423,081	-		PGA1_c23320	0.57	+0.5
2,423,164	+		PGA1_c23320	0.68	+0.0
2,423,172	-		PGA1_c23320	0.69	+1.0
2,423,172	-		PGA1_c23320	0.69	+0.5
2,423,179	+		PGA1_c23320	0.70	+0.1
2,423,187	-		PGA1_c23320	0.71	-1.0
2,423,187	-		PGA1_c23320	0.71	-1.6
2,423,208	+		PGA1_c23320	0.73	-0.4
2,423,215	-		PGA1_c23320	0.74	-0.5
2,423,264	+		PGA1_c23320	0.80	-0.7
2,423,283	+		PGA1_c23320	0.83	-1.0
2,423,366	-				-0.8
2,423,424	-				+0.4
2,423,439	+				-0.2
2,423,447	-				-0.1
2,423,479	-				-0.2
2,423,515	+				-0.4