Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c20210

Experiment: Carbon source L-Citrulline 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source L-Citrulline 5 mM
2,096,072	+		PGA1_c20200	0.19	+2.4
2,096,106	-		PGA1_c20200	0.24	+0.2
2,096,118	+		PGA1_c20200	0.26	-0.4
2,096,126	-		PGA1_c20200	0.27	-0.3
2,096,136	-		PGA1_c20200	0.29	+0.9
2,096,191	+		PGA1_c20200	0.37	+0.4
2,096,205	+		PGA1_c20200	0.40	-0.6
2,096,205	+		PGA1_c20200	0.40	-0.2
2,096,240	+		PGA1_c20200	0.45	+0.7
2,096,272	-		PGA1_c20200	0.50	-1.1
2,096,272	-		PGA1_c20200	0.50	-0.8
2,096,366	+		PGA1_c20200	0.64	-0.4
2,096,429	+		PGA1_c20200	0.74	+0.4
2,096,444	+		PGA1_c20200	0.77	-0.1
2,096,445	+		PGA1_c20200	0.77	+0.6
2,096,445	+		PGA1_c20200	0.77	-1.4
2,096,445	+		PGA1_c20200	0.77	-0.0
2,096,453	-		PGA1_c20200	0.78	+0.1
2,096,466	+		PGA1_c20200	0.80	+0.8
2,096,476	+		PGA1_c20200	0.82	-0.5
2,096,501	+		PGA1_c20200	0.85	-0.4
2,096,530	+				+0.4
2,096,530	+				+0.9
2,096,530	+				+0.7
2,096,538	-				-0.9
2,096,611	+				-1.5
2,096,616	+				-2.0
2,096,715	-				+0.9
2,096,720	+				+0.6
2,096,721	+				+0.5
2,096,721	+				+0.6
2,096,721	+				-0.3
2,096,721	+				+0.9
2,096,721	+				+2.0
2,096,721	+				+0.8
2,096,721	+				+1.3
2,096,721	+				+0.0
2,096,721	+				+1.1
2,096,721	+				+0.4
2,096,721	+				-1.6
2,096,729	-				+1.9
2,096,729	-				+0.1
2,096,729	-				+0.6
2,096,729	-				-0.5
2,096,729	-				-1.9
2,096,731	+				-1.6
2,096,731	+				-0.3
2,096,731	+				+0.6
2,096,739	-				-0.0
2,096,739	-				+1.3
2,096,739	-				+0.4
2,096,739	-				-0.5
2,096,878	+				-2.1
2,096,878	+				+0.2
2,096,959	+				-2.1
2,096,964	+				+1.1
2,096,964	+				-0.6
2,096,964	+				-0.5
2,096,971	+				+0.2
2,096,982	+				-1.6
2,097,100	-				-2.7
2,097,115	-				-2.3
2,097,125	+				-0.8
2,097,133	-				-2.3
2,097,207	+				-1.2
2,097,272	+		PGA1_c20210	0.12	-2.0
2,097,322	-		PGA1_c20210	0.15	-2.2
2,097,353	+		PGA1_c20210	0.17	-3.4
2,097,361	-		PGA1_c20210	0.17	-1.7
2,097,367	+		PGA1_c20210	0.18	-2.6
2,097,396	+		PGA1_c20210	0.19	-3.1
2,097,404	-		PGA1_c20210	0.20	-1.4
2,097,430	+		PGA1_c20210	0.21	-2.4
2,097,438	-		PGA1_c20210	0.22	-2.0
2,097,483	-		PGA1_c20210	0.24	-2.3
2,097,581	-		PGA1_c20210	0.30	-2.7
2,097,682	+		PGA1_c20210	0.36	-1.4
2,097,688	-		PGA1_c20210	0.36	-2.0
2,097,690	-		PGA1_c20210	0.36	-2.6
2,097,690	-		PGA1_c20210	0.36	-1.2
2,097,771	+		PGA1_c20210	0.41	-3.0
2,097,779	-		PGA1_c20210	0.41	-1.2
2,097,843	+		PGA1_c20210	0.45	-1.3
2,097,851	-		PGA1_c20210	0.45	-3.4
2,097,851	-		PGA1_c20210	0.45	-2.4
2,098,147	+		PGA1_c20210	0.62	-1.9
2,098,258	+		PGA1_c20210	0.68	-2.0
2,098,350	+		PGA1_c20210	0.74	-1.7
2,098,551	+		PGA1_c20210	0.85	-3.0
2,098,603	+		PGA1_c20210	0.88	-2.5
2,098,628	+		PGA1_c20210	0.90	-1.2
2,098,628	+		PGA1_c20210	0.90	-0.9
2,098,636	-				-1.6
2,098,804	+				-0.3
2,098,804	+				-0.3
2,098,804	+				+0.8
2,098,804	+				+1.4
2,098,812	-				-0.8
2,098,835	-				-0.1
2,098,879	-				+0.3
2,098,891	-				-0.1
2,098,958	+		PGA1_c20220	0.14	+0.3
2,098,966	-		PGA1_c20220	0.16	-0.1
2,099,005	-		PGA1_c20220	0.23	+0.9
2,099,049	+		PGA1_c20220	0.31	+0.1
2,099,123	-		PGA1_c20220	0.44	-0.0
2,099,123	-		PGA1_c20220	0.44	+0.8
2,099,132	-		PGA1_c20220	0.45	-0.2
2,099,134	+		PGA1_c20220	0.46	-0.1
2,099,142	-		PGA1_c20220	0.47	+0.0
2,099,181	+		PGA1_c20220	0.54	-1.0
2,099,199	+		PGA1_c20220	0.57	+3.8
2,099,379	+		PGA1_c20220	0.89	-1.1
2,099,422	+				-0.1
2,099,436	+				+0.3
2,099,457	+				+0.7
2,099,492	+				-0.8
2,099,492	+				+1.7
2,099,517	-				-0.4
2,099,603	-				+0.5
2,099,673	-		PGA1_c20230	0.22	+0.2
2,099,687	+		PGA1_c20230	0.25	-0.4
2,099,721	+		PGA1_c20230	0.32	+0.0