Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c18420

Experiment: Carbon source L-Citrulline 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source L-Citrulline 5 mM
1,921,383	+		PGA1_c18410	0.40	+1.7
1,921,388	+		PGA1_c18410	0.40	+0.7
1,921,428	+		PGA1_c18410	0.43	-0.0
1,921,431	+		PGA1_c18410	0.43	-0.4
1,921,443	+		PGA1_c18410	0.44	-0.2
1,921,449	+		PGA1_c18410	0.44	-1.0
1,921,457	+		PGA1_c18410	0.44	+0.7
1,921,465	-		PGA1_c18410	0.45	-0.7
1,921,507	-		PGA1_c18410	0.48	-0.4
1,921,509	+		PGA1_c18410	0.48	-2.2
1,921,549	+		PGA1_c18410	0.50	-0.6
1,921,549	+		PGA1_c18410	0.50	+0.9
1,921,549	+		PGA1_c18410	0.50	-0.2
1,921,549	+		PGA1_c18410	0.50	-0.8
1,921,557	-		PGA1_c18410	0.51	-1.0
1,921,557	-		PGA1_c18410	0.51	+0.6
1,921,557	-		PGA1_c18410	0.51	+0.9
1,921,557	-		PGA1_c18410	0.51	-1.6
1,921,557	-		PGA1_c18410	0.51	+0.2
1,921,584	-		PGA1_c18410	0.53	-0.6
1,921,612	+		PGA1_c18410	0.55	-0.1
1,921,615	-		PGA1_c18410	0.55	+0.1
1,921,634	+		PGA1_c18410	0.56	+1.6
1,921,673	-		PGA1_c18410	0.59	+0.8
1,921,675	+		PGA1_c18410	0.59	-0.1
1,921,730	-		PGA1_c18410	0.62	+0.9
1,921,760	+		PGA1_c18410	0.64	-1.8
1,921,852	+		PGA1_c18410	0.70	+0.6
1,921,891	+		PGA1_c18410	0.73	-0.2
1,921,906	+		PGA1_c18410	0.74	+0.6
1,921,924	-		PGA1_c18410	0.75	-0.7
1,921,961	+		PGA1_c18410	0.77	-0.4
1,921,961	+		PGA1_c18410	0.77	+0.1
1,921,969	-		PGA1_c18410	0.78	-0.5
1,921,984	+		PGA1_c18410	0.79	-0.6
1,921,987	-		PGA1_c18410	0.79	+0.6
1,922,029	+		PGA1_c18410	0.82	+0.8
1,922,045	+		PGA1_c18410	0.83	-0.1
1,922,047	-		PGA1_c18410	0.83	-0.2
1,922,068	-		PGA1_c18410	0.84	-0.4
1,922,068	-		PGA1_c18410	0.84	+1.8
1,922,119	+		PGA1_c18410	0.88	-0.5
1,922,151	-		PGA1_c18410	0.90	+0.4
1,922,165	-				-0.3
1,922,165	-				-1.1
1,922,165	-				+0.1
1,922,295	+				-0.8
1,922,325	+				+0.1
1,922,333	-				-0.0
1,922,384	+				-0.1
1,922,390	-				-0.5
1,922,432	+		PGA1_c18420	0.12	-1.2
1,922,520	+		PGA1_c18420	0.28	-0.1
1,922,530	+		PGA1_c18420	0.30	-0.6
1,922,549	-		PGA1_c18420	0.34	-1.4
1,922,592	-		PGA1_c18420	0.42	-0.6
1,922,600	+		PGA1_c18420	0.43	-0.9
1,922,600	-		PGA1_c18420	0.43	-0.2
1,922,648	+		PGA1_c18420	0.52	-0.1
1,922,648	+		PGA1_c18420	0.52	+0.2
1,922,656	-		PGA1_c18420	0.54	-0.4
1,922,663	+		PGA1_c18420	0.55	-0.5
1,922,671	-		PGA1_c18420	0.57	-0.7
1,922,671	-		PGA1_c18420	0.57	-0.6
1,922,672	-		PGA1_c18420	0.57	-0.4
1,922,695	-		PGA1_c18420	0.61	+0.3
1,922,695	-		PGA1_c18420	0.61	+0.6
1,922,805	-		PGA1_c18420	0.82	-0.5
1,922,805	-		PGA1_c18420	0.82	-0.3
1,922,820	+		PGA1_c18420	0.85	-0.4
1,922,830	+		PGA1_c18420	0.87	+0.0
1,922,838	-		PGA1_c18420	0.88	+0.5
1,922,843	+		PGA1_c18420	0.89	+0.2
1,922,852	-				+0.3
1,922,867	+				+0.2
1,922,869	-				-0.6
1,922,912	+				-1.3
1,922,912	+				+0.5
1,922,912	+				+1.1
1,922,912	+				+0.3
1,922,920	-				-0.3
1,922,920	-				+1.1
1,922,920	-				+0.4
1,923,029	-				+0.3
1,923,042	+				-0.6
1,923,042	+				-0.5
1,923,057	+				+0.0
1,923,124	+		PGA1_c18430	0.11	+0.3
1,923,157	-		PGA1_c18430	0.13	+0.8
1,923,158	+		PGA1_c18430	0.13	+0.2
1,923,278	+		PGA1_c18430	0.19	-1.8
1,923,307	-		PGA1_c18430	0.20	+1.0
1,923,316	+		PGA1_c18430	0.21	-0.4
1,923,316	+		PGA1_c18430	0.21	-0.1
1,923,318	-		PGA1_c18430	0.21	+0.4
1,923,324	-		PGA1_c18430	0.21	+1.0
1,923,364	-		PGA1_c18430	0.23	+0.9
1,923,364	-		PGA1_c18430	0.23	-1.4
1,923,379	-		PGA1_c18430	0.24	+0.2
1,923,400	+		PGA1_c18430	0.25	-0.8
1,923,402	-		PGA1_c18430	0.25	+0.4
1,923,530	+		PGA1_c18430	0.32	+0.4
1,923,618	-		PGA1_c18430	0.36	-0.6
1,923,618	-		PGA1_c18430	0.36	-0.6
1,923,642	+		PGA1_c18430	0.38	+0.8
1,923,708	+		PGA1_c18430	0.41	-0.7
1,923,734	-		PGA1_c18430	0.42	-0.3
1,923,772	+		PGA1_c18430	0.44	+0.7
1,923,852	-		PGA1_c18430	0.48	-1.2
1,923,881	+		PGA1_c18430	0.50	+0.7
1,923,889	-		PGA1_c18430	0.50	-0.2