Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c13260

Experiment: Carbon source L-Citrulline 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source L-Citrulline 5 mM
1,370,636	+		PGA1_c13250	0.20	+1.1
1,370,662	-		PGA1_c13250	0.22	-0.5
1,370,664	+		PGA1_c13250	0.23	+0.1
1,370,664	+		PGA1_c13250	0.23	+0.1
1,370,664	+		PGA1_c13250	0.23	-0.1
1,370,688	-		PGA1_c13250	0.25	+0.4
1,370,698	-		PGA1_c13250	0.26	+0.1
1,370,713	+		PGA1_c13250	0.28	+0.3
1,370,713	+		PGA1_c13250	0.28	+0.5
1,370,713	+		PGA1_c13250	0.28	+0.0
1,370,762	-		PGA1_c13250	0.33	+0.5
1,370,775	-		PGA1_c13250	0.34	-0.2
1,370,790	-		PGA1_c13250	0.35	-1.5
1,370,806	+		PGA1_c13250	0.37	+1.3
1,370,809	-		PGA1_c13250	0.37	-2.3
1,370,814	-		PGA1_c13250	0.38	-1.3
1,370,849	+		PGA1_c13250	0.41	-1.7
1,370,849	+		PGA1_c13250	0.41	-0.5
1,370,849	+		PGA1_c13250	0.41	-0.0
1,370,891	-		PGA1_c13250	0.46	+0.2
1,370,910	+		PGA1_c13250	0.48	+0.6
1,370,910	+		PGA1_c13250	0.48	+1.6
1,370,918	-		PGA1_c13250	0.48	+0.3
1,370,918	-		PGA1_c13250	0.48	+0.6
1,370,918	-		PGA1_c13250	0.48	+1.7
1,370,953	+		PGA1_c13250	0.52	-0.1
1,370,964	+		PGA1_c13250	0.53	-0.1
1,370,995	+		PGA1_c13250	0.56	+0.6
1,371,062	+		PGA1_c13250	0.63	+0.2
1,371,102	+		PGA1_c13250	0.67	+1.2
1,371,105	-		PGA1_c13250	0.67	-1.1
1,371,105	-		PGA1_c13250	0.67	-0.1
1,371,105	-		PGA1_c13250	0.67	+1.0
1,371,105	-		PGA1_c13250	0.67	+0.1
1,371,150	-		PGA1_c13250	0.72	+0.4
1,371,176	+		PGA1_c13250	0.75	-0.1
1,371,189	+		PGA1_c13250	0.76	+0.6
1,371,189	+		PGA1_c13250	0.76	+0.0
1,371,189	+		PGA1_c13250	0.76	+0.3
1,371,197	-		PGA1_c13250	0.77	+0.2
1,371,199	+		PGA1_c13250	0.77	+0.0
1,371,212	+		PGA1_c13250	0.78	+1.2
1,371,215	-		PGA1_c13250	0.79	-0.1
1,371,215	-		PGA1_c13250	0.79	-0.9
1,371,215	-		PGA1_c13250	0.79	+0.3
1,371,277	+		PGA1_c13250	0.85	-0.0
1,371,285	-		PGA1_c13250	0.86	-0.9
1,371,285	-		PGA1_c13250	0.86	+0.3
1,371,319	+		PGA1_c13250	0.89	+0.5
1,371,330	-				+0.4
1,371,463	-				+0.8
1,371,487	-				+1.8
1,371,533	-				-1.6
1,371,535	-				+1.7
1,371,564	-				-2.9
1,371,590	-				-1.1
1,371,628	+				-1.1
1,371,675	+		PGA1_c13260	0.11	-2.4
1,371,675	+		PGA1_c13260	0.11	-2.5
1,371,683	-		PGA1_c13260	0.11	+0.1
1,371,722	-		PGA1_c13260	0.15	+0.8
1,372,087	-		PGA1_c13260	0.50	-2.5
1,372,128	+		PGA1_c13260	0.54	-0.5
1,372,219	+		PGA1_c13260	0.63	-2.8
1,372,235	+		PGA1_c13260	0.64	-2.5
1,372,283	+		PGA1_c13260	0.69	-0.9
1,372,291	-		PGA1_c13260	0.69	-0.7
1,372,387	+		PGA1_c13260	0.79	-1.5
1,372,387	+		PGA1_c13260	0.79	-1.1
1,372,387	+		PGA1_c13260	0.79	-2.7
1,372,395	-		PGA1_c13260	0.79	-1.9
1,372,562	-				-1.7
1,372,591	+				-0.6
1,372,731	+		PGA1_c13270	0.21	+0.0
1,372,811	+		PGA1_c13270	0.34	-0.1
1,372,885	+		PGA1_c13270	0.47	+0.4
1,372,893	-		PGA1_c13270	0.48	-1.1
1,372,893	-		PGA1_c13270	0.48	-1.3
1,372,941	+		PGA1_c13270	0.56	-2.3
1,373,065	-		PGA1_c13270	0.77	-2.8
1,373,068	+		PGA1_c13270	0.77	+0.4
1,373,197	+				+0.7
1,373,197	+				-0.4
1,373,200	-				-3.3
1,373,269	+				-2.3
1,373,339	+		PGA1_c13280	0.37	+0.4
1,373,347	-		PGA1_c13280	0.41	-1.6
1,373,347	-		PGA1_c13280	0.41	-0.1
1,373,380	-		PGA1_c13280	0.59	+0.5
1,373,395	-		PGA1_c13280	0.67	-0.0
1,373,429	+		PGA1_c13280	0.85	+0.1
1,373,429	+		PGA1_c13280	0.85	+0.1
1,373,429	+		PGA1_c13280	0.85	+1.1
1,373,429	+		PGA1_c13280	0.85	-1.6
1,373,449	-				+0.3
1,373,449	-				+0.8
1,373,449	-				+0.9
1,373,449	-				+1.7
1,373,449	-				-2.4
1,373,487	+				+0.8
1,373,487	+				+0.7
1,373,487	+				-0.2
1,373,487	+				-0.1
1,373,487	+				-1.4
1,373,487	+				+0.0
1,373,495	-				+1.0
1,373,495	-				+0.3
1,373,495	-				+1.8
1,373,495	-				-0.2
1,373,563	+				+0.1
1,373,577	+				+1.1