Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c11870

Experiment: Carbon source L-Citrulline 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source L-Citrulline 5 mM
1,228,503	-		PGA1_c11850	0.18	-2.2
1,228,503	-		PGA1_c11850	0.18	+0.9
1,228,553	+		PGA1_c11850	0.25	-1.3
1,228,610	-		PGA1_c11850	0.34	+0.8
1,228,732	-		PGA1_c11850	0.52	+0.6
1,228,820	-		PGA1_c11850	0.65	+0.2
1,228,820	-		PGA1_c11850	0.65	+0.2
1,228,864	-		PGA1_c11850	0.71	-0.9
1,228,866	+		PGA1_c11850	0.72	+1.3
1,228,879	-		PGA1_c11850	0.73	-0.8
1,228,913	+		PGA1_c11850	0.78	+1.7
1,228,986	-		PGA1_c11850	0.89	+1.3
1,229,037	-				+0.0
1,229,134	-				+1.0
1,229,174	+		PGA1_c11860	0.13	+1.0
1,229,174	+		PGA1_c11860	0.13	+2.5
1,229,182	-		PGA1_c11860	0.16	-0.4
1,229,202	-		PGA1_c11860	0.23	-0.7
1,229,262	+		PGA1_c11860	0.44	-0.8
1,229,262	+		PGA1_c11860	0.44	+0.5
1,229,262	+		PGA1_c11860	0.44	-0.0
1,229,269	+		PGA1_c11860	0.46	-0.2
1,229,270	-		PGA1_c11860	0.47	-2.1
1,229,270	-		PGA1_c11860	0.47	+0.2
1,229,291	+		PGA1_c11860	0.54	-0.7
1,229,296	+		PGA1_c11860	0.56	-2.1
1,229,299	-		PGA1_c11860	0.57	-0.4
1,229,299	-		PGA1_c11860	0.57	+0.6
1,229,299	-		PGA1_c11860	0.57	-0.7
1,229,301	+		PGA1_c11860	0.58	-1.2
1,229,301	+		PGA1_c11860	0.58	-1.5
1,229,301	+		PGA1_c11860	0.58	-1.3
1,229,309	-		PGA1_c11860	0.60	+0.6
1,229,400	+				+0.8
1,229,408	-				+0.0
1,229,409	-				+0.4
1,229,415	+				+0.7
1,229,452	-				-1.2
1,229,506	-				-0.2
1,229,507	-				+0.3
1,229,561	+				-3.3
1,229,582	-				-0.8
1,229,674	-		PGA1_c11870	0.13	-3.5
1,229,682	-		PGA1_c11870	0.14	-2.2
1,229,692	-		PGA1_c11870	0.15	-2.2
1,229,765	+		PGA1_c11870	0.20	+0.1
1,229,765	+		PGA1_c11870	0.20	-2.5
1,229,765	+		PGA1_c11870	0.20	-1.5
1,229,773	-		PGA1_c11870	0.21	-1.4
1,229,773	-		PGA1_c11870	0.21	-0.8
1,229,773	-		PGA1_c11870	0.21	-1.8
1,229,773	-		PGA1_c11870	0.21	-3.0
1,229,773	-		PGA1_c11870	0.21	-2.3
1,229,773	-		PGA1_c11870	0.21	-2.6
1,229,773	-		PGA1_c11870	0.21	-1.1
1,229,773	-		PGA1_c11870	0.21	-1.3
1,229,792	+		PGA1_c11870	0.22	-2.8
1,229,792	+		PGA1_c11870	0.22	-1.7
1,229,807	-		PGA1_c11870	0.24	-3.7
1,229,829	-		PGA1_c11870	0.25	+0.5
1,229,865	+		PGA1_c11870	0.28	-3.1
1,229,873	-		PGA1_c11870	0.29	-3.4
1,229,981	+		PGA1_c11870	0.37	-0.1
1,229,999	-		PGA1_c11870	0.38	-2.2
1,230,001	-		PGA1_c11870	0.38	-3.0
1,230,091	+		PGA1_c11870	0.45	-2.2
1,230,126	+		PGA1_c11870	0.48	-4.0
1,230,126	+		PGA1_c11870	0.48	-1.8
1,230,126	+		PGA1_c11870	0.48	-3.8
1,230,134	-		PGA1_c11870	0.49	-3.4
1,230,134	-		PGA1_c11870	0.49	-0.9
1,230,134	-		PGA1_c11870	0.49	-3.3
1,230,351	+		PGA1_c11870	0.65	-1.1
1,230,395	-		PGA1_c11870	0.69	-1.7
1,230,410	+		PGA1_c11870	0.70	-3.9
1,230,410	+		PGA1_c11870	0.70	-3.5
1,230,410	+		PGA1_c11870	0.70	-1.8
1,230,418	-		PGA1_c11870	0.71	-3.1
1,230,418	-		PGA1_c11870	0.71	-2.0
1,230,440	-		PGA1_c11870	0.72	-2.3
1,230,449	-		PGA1_c11870	0.73	-3.0
1,230,486	+		PGA1_c11870	0.76	-2.5
1,230,494	-		PGA1_c11870	0.76	-3.0
1,230,620	+		PGA1_c11870	0.86	-1.2
1,230,625	+		PGA1_c11870	0.87	-1.8
1,230,625	+		PGA1_c11870	0.87	-4.2
1,230,633	-		PGA1_c11870	0.87	-3.0
1,230,633	-		PGA1_c11870	0.87	-4.1
1,230,733	+				-3.2
1,230,733	+				-2.3
1,230,741	-				-2.1
1,230,741	-				-2.5
1,230,741	-				-2.2
1,230,867	-				-2.8
1,230,867	-				-0.8
1,230,898	+				-0.8
1,230,964	+				+0.2
1,230,972	-				+0.3
1,231,745	+				-0.3
1,231,745	+				+0.3
1,231,753	-				+0.5