Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c11750

Experiment: Carbon source L-Citrulline 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source L-Citrulline 5 mM
1,215,041	-		PGA1_c11730	0.89	+1.2
1,215,041	-		PGA1_c11730	0.89	+0.2
1,215,063	+				+0.1
1,215,071	-				+0.6
1,215,072	+				+0.2
1,215,073	+				-0.1
1,215,090	-				-0.7
1,215,106	+				+0.9
1,215,106	+				+0.4
1,215,107	+				-0.3
1,215,114	-				-0.4
1,215,114	-				-1.3
1,215,124	-				+0.5
1,215,192	-				-1.2
1,215,192	-				-0.1
1,215,208	+		PGA1_c11740	0.11	+0.6
1,215,250	-		PGA1_c11740	0.16	-0.1
1,215,290	-		PGA1_c11740	0.21	-0.9
1,215,346	+		PGA1_c11740	0.28	-1.5
1,215,346	+		PGA1_c11740	0.28	-0.5
1,215,376	+		PGA1_c11740	0.32	-1.0
1,215,400	-		PGA1_c11740	0.35	+0.3
1,215,409	+		PGA1_c11740	0.37	+0.7
1,215,542	-		PGA1_c11740	0.54	-0.7
1,215,578	+		PGA1_c11740	0.58	+0.4
1,215,578	+		PGA1_c11740	0.58	-0.5
1,215,745	-		PGA1_c11740	0.80	-0.5
1,215,752	-		PGA1_c11740	0.81	-0.1
1,215,763	-		PGA1_c11740	0.82	+0.2
1,215,790	+		PGA1_c11740	0.86	+0.5
1,215,794	+		PGA1_c11740	0.86	-1.2
1,215,794	+		PGA1_c11740	0.86	-0.1
1,215,844	+				-0.1
1,215,844	+				+0.3
1,215,847	-				-1.9
1,215,852	-				-0.5
1,215,852	-				-0.0
1,215,856	+				+0.4
1,215,908	+				-0.2
1,215,920	+				-0.2
1,215,950	+				+1.7
1,216,129	+				-2.2
1,216,257	-				-1.1
1,216,264	+				-3.2
1,216,411	+		PGA1_c11750	0.12	-2.2
1,216,489	-		PGA1_c11750	0.14	-1.7
1,216,578	+		PGA1_c11750	0.17	-3.3
1,216,585	-		PGA1_c11750	0.17	-1.7
1,216,612	+		PGA1_c11750	0.18	-1.3
1,216,644	+		PGA1_c11750	0.19	-2.6
1,216,656	+		PGA1_c11750	0.19	-3.3
1,216,656	+		PGA1_c11750	0.19	-1.4
1,216,659	-		PGA1_c11750	0.19	-1.3
1,216,664	-		PGA1_c11750	0.19	-1.1
1,216,664	-		PGA1_c11750	0.19	-2.8
1,216,690	-		PGA1_c11750	0.20	-2.5
1,216,692	+		PGA1_c11750	0.20	-2.4
1,216,736	+		PGA1_c11750	0.22	-1.1
1,216,853	+		PGA1_c11750	0.25	-2.6
1,216,861	-		PGA1_c11750	0.25	-2.2
1,216,913	+		PGA1_c11750	0.27	+1.5
1,216,921	+		PGA1_c11750	0.27	-1.5
1,216,939	+		PGA1_c11750	0.27	-3.3
1,216,958	+		PGA1_c11750	0.28	-2.0
1,217,016	+		PGA1_c11750	0.30	-1.7
1,217,016	+		PGA1_c11750	0.30	-2.4
1,217,016	+		PGA1_c11750	0.30	-1.7
1,217,026	+		PGA1_c11750	0.30	-3.1
1,217,029	-		PGA1_c11750	0.30	-1.8
1,217,029	-		PGA1_c11750	0.30	-2.4
1,217,029	-		PGA1_c11750	0.30	-1.7
1,217,041	-		PGA1_c11750	0.30	-1.1
1,217,229	+		PGA1_c11750	0.36	-4.0
1,217,231	-		PGA1_c11750	0.36	-1.5
1,217,500	+		PGA1_c11750	0.43	-4.1
1,217,611	+		PGA1_c11750	0.47	-2.1
1,217,652	+		PGA1_c11750	0.48	-3.1
1,217,662	+		PGA1_c11750	0.48	-2.9
1,217,715	-		PGA1_c11750	0.50	-2.9
1,217,899	-		PGA1_c11750	0.55	-3.5
1,217,919	+		PGA1_c11750	0.56	-1.7
1,217,957	+		PGA1_c11750	0.57	-2.4
1,218,123	+		PGA1_c11750	0.61	-3.1
1,218,210	+		PGA1_c11750	0.64	-3.1
1,218,338	+		PGA1_c11750	0.68	-1.7
1,218,338	+		PGA1_c11750	0.68	-3.2
1,218,338	+		PGA1_c11750	0.68	-2.6
1,218,346	-		PGA1_c11750	0.68	-2.0
1,218,346	-		PGA1_c11750	0.68	-1.4
1,218,361	-		PGA1_c11750	0.68	-2.6
1,218,361	-		PGA1_c11750	0.68	-2.1
1,218,462	+		PGA1_c11750	0.71	-0.9
1,218,469	+		PGA1_c11750	0.71	-1.5
1,218,470	-		PGA1_c11750	0.71	-3.1
1,218,493	+		PGA1_c11750	0.72	-1.6
1,218,537	+		PGA1_c11750	0.73	-0.5
1,218,669	+		PGA1_c11750	0.77	-3.0
1,218,736	+		PGA1_c11750	0.79	-3.3
1,218,736	+		PGA1_c11750	0.79	-2.5
1,218,945	-		PGA1_c11750	0.85	-2.8
1,218,945	-		PGA1_c11750	0.85	-4.3
1,218,985	+		PGA1_c11750	0.86	-2.1
1,218,985	+		PGA1_c11750	0.86	-1.7
1,218,990	+		PGA1_c11750	0.86	-0.9
1,219,055	+		PGA1_c11750	0.88	-2.0
1,219,055	+		PGA1_c11750	0.88	-1.5
1,219,063	-		PGA1_c11750	0.88	-0.9
1,219,073	-		PGA1_c11750	0.89	-3.2
1,219,076	+		PGA1_c11750	0.89	-3.1
1,219,175	+				-1.0
1,219,180	+				-1.8
1,219,180	+				-2.3
1,219,180	+				-3.3
1,219,239	+				+1.5
1,219,395	+				-2.1
1,219,402	+				-1.8
1,219,651	+		PGA1_c11760	0.11	-1.1
1,219,651	+		PGA1_c11760	0.11	-2.7
1,219,665	-		PGA1_c11760	0.14	-2.7
1,219,687	-		PGA1_c11760	0.18	-3.1
1,219,748	-		PGA1_c11760	0.31	-2.4
1,219,803	+		PGA1_c11760	0.43	-1.5
1,219,897	+		PGA1_c11760	0.63	-1.3
1,219,897	+		PGA1_c11760	0.63	-2.5
1,219,989	+		PGA1_c11760	0.82	-2.2
1,220,017	+		PGA1_c11760	0.88	-2.5
1,220,025	-		PGA1_c11760	0.90	-0.5
1,220,060	-				-1.1
1,220,070	-				-2.1
1,220,133	+				-0.4
1,220,133	+				+1.3
1,220,151	+				-1.0
1,220,151	+				+1.3
1,220,151	+				-0.7
1,220,151	+				-0.5
1,220,159	-				+0.3
1,220,159	-				+1.1
1,220,210	-		PGA1_c11770	0.11	+0.2
1,220,224	-		PGA1_c11770	0.13	-0.9
1,220,230	+		PGA1_c11770	0.14	-0.9
1,220,290	-		PGA1_c11770	0.23	-0.2
1,220,290	-		PGA1_c11770	0.23	-0.4
1,220,305	+		PGA1_c11770	0.26	-0.6