Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c11040

Experiment: Carbon source L-Citrulline 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source L-Citrulline 5 mM
1,142,006	+		PGA1_c11030	0.15	-2.0
1,142,039	+		PGA1_c11030	0.19	-1.0
1,142,039	+		PGA1_c11030	0.19	+0.5
1,142,047	+		PGA1_c11030	0.20	+0.3
1,142,047	+		PGA1_c11030	0.20	-1.2
1,142,047	-		PGA1_c11030	0.20	-0.1
1,142,047	-		PGA1_c11030	0.20	+0.2
1,142,094	+		PGA1_c11030	0.25	+2.5
1,142,098	-		PGA1_c11030	0.26	+1.2
1,142,113	-		PGA1_c11030	0.27	-0.1
1,142,117	+		PGA1_c11030	0.28	-0.5
1,142,199	-		PGA1_c11030	0.38	+0.4
1,142,366	-		PGA1_c11030	0.57	-0.4
1,142,418	+		PGA1_c11030	0.64	+1.2
1,142,418	+		PGA1_c11030	0.64	-1.1
1,142,442	-		PGA1_c11030	0.67	-0.8
1,142,577	-		PGA1_c11030	0.83	-0.1
1,142,618	-		PGA1_c11030	0.88	-0.5
1,142,625	+		PGA1_c11030	0.88	-0.5
1,142,648	-				+1.3
1,142,702	-				+0.6
1,142,702	-				+1.2
1,142,741	+				+0.1
1,142,751	+				+0.1
1,142,782	-				-0.4
1,142,797	+				+1.1
1,142,800	-				-0.2
1,142,805	-				-0.3
1,142,848	-				-1.3
1,142,876	+				-0.2
1,142,890	+				+1.5
1,142,890	+				+0.6
1,142,890	+				-0.5
1,142,890	+				-1.1
1,142,890	+				-1.3
1,142,898	-				-0.5
1,142,898	-				-1.5
1,142,898	-				-1.8
1,142,900	+				-2.0
1,142,900	+				-0.5
1,142,903	-				-2.1
1,142,908	-				-1.3
1,142,908	-				-1.0
1,142,955	+		PGA1_c11040	0.14	+1.5
1,142,963	-		PGA1_c11040	0.16	+0.1
1,142,975	-		PGA1_c11040	0.19	-2.8
1,142,977	-		PGA1_c11040	0.19	-1.8
1,143,011	+		PGA1_c11040	0.27	-2.3
1,143,019	-		PGA1_c11040	0.28	-0.8
1,143,076	-		PGA1_c11040	0.41	-0.8
1,143,127	+		PGA1_c11040	0.53	-1.8
1,143,127	+		PGA1_c11040	0.53	-1.1
1,143,135	-		PGA1_c11040	0.54	-2.1
1,143,204	+		PGA1_c11040	0.70	-2.2
1,143,217	+		PGA1_c11040	0.73	+0.5
1,143,225	-		PGA1_c11040	0.74	-0.5
1,143,234	+		PGA1_c11040	0.77	-1.1
1,143,237	-		PGA1_c11040	0.77	+1.5
1,143,283	+		PGA1_c11040	0.87	-1.1
1,143,291	-		PGA1_c11040	0.89	-0.5
1,143,291	-		PGA1_c11040	0.89	+0.5
1,143,377	-				+0.3
1,143,385	-				+0.3
1,143,419	+				+2.2
1,143,433	+				-0.3