Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c10130

Experiment: Carbon source L-Ornithine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source L-Ornithine 5 mM
1,046,074	+		PGA1_c10120	0.63	+1.2
1,046,121	+		PGA1_c10120	0.66	+1.7
1,046,176	+		PGA1_c10120	0.69	-0.8
1,046,317	+		PGA1_c10120	0.78	+1.2
1,046,365	-		PGA1_c10120	0.80	+2.5
1,046,372	-		PGA1_c10120	0.81	+1.6
1,046,372	-		PGA1_c10120	0.81	-1.2
1,046,372	-		PGA1_c10120	0.81	-0.4
1,046,398	+		PGA1_c10120	0.82	-0.4
1,046,429	-		PGA1_c10120	0.84	+1.2
1,046,429	-		PGA1_c10120	0.84	+1.4
1,046,554	-				+0.1
1,046,581	+				+2.2
1,046,645	+				-1.4
1,046,725	-				-2.3
1,046,727	-				-0.8
1,046,785	-				-0.6
1,046,861	+				+2.2
1,046,933	+				+0.4
1,046,933	+				+0.3
1,046,933	+				-2.1
1,046,941	-				+1.4
1,046,941	-				-0.2
1,046,956	+				-2.7
1,046,961	+				+0.3
1,046,961	+				+0.0
1,046,961	+				-1.1
1,046,961	+				-0.9
1,046,961	+				+0.2
1,046,961	+				+0.3
1,046,964	-				+1.0
1,046,969	-				-0.0
1,046,969	-				-0.2
1,046,974	-				+1.3
1,047,016	-				+1.3
1,047,057	-				-1.2
1,047,087	+				-0.1
1,047,095	-				+0.6
1,047,184	-				+0.7
1,047,307	+		PGA1_c10130	0.15	+0.7
1,047,343	+		PGA1_c10130	0.17	+1.4
1,047,351	-		PGA1_c10130	0.18	-0.7
1,047,367	+		PGA1_c10130	0.19	-0.0
1,047,388	+		PGA1_c10130	0.20	+1.8
1,047,464	+		PGA1_c10130	0.24	-0.6
1,047,472	-		PGA1_c10130	0.24	+0.3
1,047,643	-		PGA1_c10130	0.34	+0.4
1,047,850	+		PGA1_c10130	0.45	+0.8
1,047,855	+		PGA1_c10130	0.46	+0.2
1,047,855	+		PGA1_c10130	0.46	+0.9
1,047,884	+		PGA1_c10130	0.47	+0.4
1,047,979	+		PGA1_c10130	0.52	-1.5
1,047,997	+		PGA1_c10130	0.53	+1.2
1,048,028	-		PGA1_c10130	0.55	+0.7
1,048,038	-		PGA1_c10130	0.56	-0.1
1,048,045	-		PGA1_c10130	0.56	+1.2
1,048,046	-		PGA1_c10130	0.56	-0.1
1,048,290	-		PGA1_c10130	0.69	+1.5
1,048,468	-		PGA1_c10130	0.79	+0.9
1,048,531	-		PGA1_c10130	0.83	+0.7
1,048,662	+		PGA1_c10130	0.90	+1.3
1,048,670	-				-0.2
1,048,670	-				+1.0
1,048,670	-				-0.0
1,048,670	-				+0.5
1,048,674	+				-0.1
1,048,678	+				-1.3
1,048,777	+				-1.0
1,048,809	-				-0.3
1,048,842	+				-0.5
1,048,982	+		PGA1_c10140	0.11	-2.0
1,048,990	-		PGA1_c10140	0.12	+0.7
1,048,990	-		PGA1_c10140	0.12	-0.3
1,049,019	+		PGA1_c10140	0.14	-1.6
1,049,027	-		PGA1_c10140	0.15	+0.3
1,049,027	-		PGA1_c10140	0.15	-1.5
1,049,041	+		PGA1_c10140	0.16	+1.3
1,049,099	+		PGA1_c10140	0.21	+2.2
1,049,099	+		PGA1_c10140	0.21	-0.2
1,049,102	-		PGA1_c10140	0.22	+0.1
1,049,109	+		PGA1_c10140	0.22	-0.8
1,049,125	-		PGA1_c10140	0.23	-0.9
1,049,126	+		PGA1_c10140	0.24	-1.1
1,049,134	-		PGA1_c10140	0.24	-1.9
1,049,153	-		PGA1_c10140	0.26	+0.2
1,049,219	+		PGA1_c10140	0.32	-0.9
1,049,227	-		PGA1_c10140	0.32	-1.0
1,049,351	-		PGA1_c10140	0.43	+1.4
1,049,406	-		PGA1_c10140	0.48	+1.2
1,049,413	+		PGA1_c10140	0.48	-0.3
1,049,413	+		PGA1_c10140	0.48	-0.8
1,049,421	-		PGA1_c10140	0.49	-1.1
1,049,459	+		PGA1_c10140	0.52	+0.9
1,049,467	-		PGA1_c10140	0.53	+0.8
1,049,515	-		PGA1_c10140	0.57	+0.5
1,049,534	-		PGA1_c10140	0.59	+0.5
1,049,546	-		PGA1_c10140	0.60	-0.8
1,049,546	-		PGA1_c10140	0.60	+0.7
1,049,566	+		PGA1_c10140	0.61	+0.7
1,049,571	-		PGA1_c10140	0.62	+0.1
1,049,587	-		PGA1_c10140	0.63	+0.2
1,049,595	+		PGA1_c10140	0.64	+0.4
1,049,595	+		PGA1_c10140	0.64	-0.3
1,049,603	+		PGA1_c10140	0.64	-0.3
1,049,603	-		PGA1_c10140	0.64	+2.3
1,049,623	-		PGA1_c10140	0.66	-0.0
1,049,726	-		PGA1_c10140	0.75	+0.2
1,049,745	-		PGA1_c10140	0.77	+0.7
1,049,786	+		PGA1_c10140	0.80	-0.1
1,049,839	+		PGA1_c10140	0.85	+1.1