Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c09300

Experiment: Carbon source L-Ornithine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source L-Ornithine 5 mM
950,117	+				+0.6
950,195	-				-0.6
950,213	-		PGA1_c09280	0.11	-0.2
950,214	+		PGA1_c09280	0.12	+0.6
950,222	-		PGA1_c09280	0.14	-3.0
950,227	-		PGA1_c09280	0.15	-0.2
950,277	-		PGA1_c09280	0.28	-0.3
950,294	+		PGA1_c09280	0.32	+0.1
950,297	+		PGA1_c09280	0.33	-0.2
950,310	-		PGA1_c09280	0.36	-0.4
950,343	+		PGA1_c09280	0.45	+0.2
950,421	+		PGA1_c09280	0.65	+0.5
950,426	+		PGA1_c09280	0.66	+0.8
950,435	-		PGA1_c09280	0.69	-1.0
950,444	-		PGA1_c09280	0.71	+1.4
950,464	+		PGA1_c09280	0.76	-0.0
950,465	+		PGA1_c09280	0.76	-0.3
950,514	+		PGA1_c09280	0.89	-1.7
950,522	-				-0.2
950,532	-				+1.5
950,532	-				-0.9
950,601	+				+1.6
950,606	+				-0.1
950,658	+				+0.3
950,666	-				-0.3
950,666	-				+0.6
950,666	-				-0.6
950,781	+		PGA1_c09290	0.48	+0.3
950,802	+		PGA1_c09290	0.56	-0.5
950,802	+		PGA1_c09290	0.56	+1.3
950,810	-		PGA1_c09290	0.60	+0.6
950,812	+		PGA1_c09290	0.60	-1.2
950,859	+		PGA1_c09290	0.79	+0.7
950,859	+		PGA1_c09290	0.79	+0.3
950,903	+				+0.7
950,903	+				-0.5
950,903	+				-2.7
950,903	+				+0.7
950,911	-				-0.3
950,911	-				-0.9
950,911	-				-2.4
950,911	-				+1.2
950,954	+				-1.3
950,954	+				+0.9
950,954	-				+0.0
950,962	-				+0.6
950,962	-				+1.2
950,962	-				-0.2
950,962	-				+0.7
950,962	-				-2.5
950,969	+				+0.1
951,032	-				-0.1
951,094	-				-1.5
951,190	+		PGA1_c09300	0.19	-0.5
951,190	+		PGA1_c09300	0.19	-0.7
951,193	-		PGA1_c09300	0.20	-0.5
951,195	+		PGA1_c09300	0.20	-0.5
951,198	-		PGA1_c09300	0.20	-2.8
951,198	-		PGA1_c09300	0.20	+0.9
951,198	-		PGA1_c09300	0.20	-0.0
951,203	+		PGA1_c09300	0.21	-1.9
951,203	-		PGA1_c09300	0.21	+0.2
951,203	-		PGA1_c09300	0.21	+0.2
951,219	+		PGA1_c09300	0.24	-1.1
951,230	+		PGA1_c09300	0.26	-1.6
951,230	+		PGA1_c09300	0.26	-0.1
951,238	-		PGA1_c09300	0.28	-1.5
951,267	+		PGA1_c09300	0.33	-2.2
951,275	-		PGA1_c09300	0.35	+0.8
951,320	-		PGA1_c09300	0.43	+0.7
951,350	-		PGA1_c09300	0.49	-0.2
951,350	-		PGA1_c09300	0.49	-0.1
951,350	-		PGA1_c09300	0.49	+0.8
951,368	+		PGA1_c09300	0.52	+1.1
951,371	-		PGA1_c09300	0.53	+0.1
951,394	+		PGA1_c09300	0.57	-1.0
951,402	-		PGA1_c09300	0.58	-1.6
951,527	+		PGA1_c09300	0.82	-0.4
951,540	-		PGA1_c09300	0.84	+1.2
951,556	-		PGA1_c09300	0.87	-0.4
951,589	+				+0.8
951,589	+				+1.8
951,589	+				+1.8
951,594	+				-1.0
951,597	-				-0.4
951,597	-				-2.2
951,628	-				-0.9
951,632	+				+0.2
951,679	+				+0.7
951,739	-				-0.3
951,742	+				+1.4
951,747	-				-0.5
951,783	-				+1.3
951,797	+				+1.7
951,797	+				+0.6
951,839	-		PGA1_c09310	0.15	+1.6
951,842	+		PGA1_c09310	0.16	-0.6
951,882	+		PGA1_c09310	0.21	-0.0
951,895	-		PGA1_c09310	0.23	-0.2
951,895	-		PGA1_c09310	0.23	-0.7
951,910	+		PGA1_c09310	0.25	+0.1
951,918	-		PGA1_c09310	0.26	-0.2
951,984	+		PGA1_c09310	0.35	-1.2
951,990	+		PGA1_c09310	0.36	-1.8
951,990	+		PGA1_c09310	0.36	-0.4
952,018	-		PGA1_c09310	0.40	-2.9
952,066	-		PGA1_c09310	0.46	+0.2
952,125	-		PGA1_c09310	0.55	+1.1
952,193	+		PGA1_c09310	0.64	-1.0
952,214	+		PGA1_c09310	0.67	+0.2
952,331	+		PGA1_c09310	0.83	-1.2
952,353	+		PGA1_c09310	0.86	+0.6
952,381	+		PGA1_c09310	0.89	-0.2
952,389	+				-0.7
952,412	+				-2.6
952,412	+				+0.4
952,413	+				+0.7
952,413	+				-0.4
952,420	-				-1.2
952,420	-				+1.6
952,425	+				-0.2
952,425	+				-1.2
952,450	+				+1.2
952,452	+				-1.6
952,469	+				+0.2
952,523	-				-0.8
952,523	-				+1.2
952,561	-				+0.6