Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c34320

Experiment: Carbon source L-Ornithine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source L-Ornithine 5 mM
3,596,641	-		PGA1_c34310	0.21	+1.8
3,596,905	-		PGA1_c34310	0.47	+1.4
3,596,905	-		PGA1_c34310	0.47	+0.4
3,596,993	-		PGA1_c34310	0.55	+2.1
3,597,008	-		PGA1_c34310	0.56	+0.6
3,597,038	+		PGA1_c34310	0.59	+0.1
3,597,052	+		PGA1_c34310	0.60	-1.7
3,597,063	+		PGA1_c34310	0.62	-0.9
3,597,066	-		PGA1_c34310	0.62	+0.2
3,597,066	-		PGA1_c34310	0.62	-1.5
3,597,071	-		PGA1_c34310	0.62	-0.8
3,597,140	+		PGA1_c34310	0.69	-0.7
3,597,140	+		PGA1_c34310	0.69	+0.1
3,597,140	+		PGA1_c34310	0.69	-1.1
3,597,140	+		PGA1_c34310	0.69	-0.3
3,597,148	-		PGA1_c34310	0.70	+1.3
3,597,148	-		PGA1_c34310	0.70	+0.5
3,597,148	-		PGA1_c34310	0.70	-0.5
3,597,148	-		PGA1_c34310	0.70	-2.3
3,597,148	-		PGA1_c34310	0.70	-1.4
3,597,211	-		PGA1_c34310	0.76	+0.7
3,597,265	+		PGA1_c34310	0.81	-0.8
3,597,313	-		PGA1_c34310	0.85	-1.1
3,597,313	-		PGA1_c34310	0.85	-0.6
3,597,313	-		PGA1_c34310	0.85	+0.9
3,597,377	+				+0.1
3,597,411	+				-0.9
3,597,418	+				-1.5
3,597,418	+				-2.4
3,597,465	-				+0.3
3,597,470	+				+1.9
3,597,521	+				-0.1
3,597,521	-				-1.6
3,597,543	-				-1.4
3,597,545	+				+0.7
3,597,568	+				-0.4
3,597,593	+				+1.1
3,597,593	+				+3.1
3,597,618	+				+0.1
3,597,626	-				+0.9
3,597,639	-				+1.9
3,597,715	-				+0.5
3,597,731	-		PGA1_c34320	0.11	+0.4
3,597,731	-		PGA1_c34320	0.11	+0.1
3,597,761	-		PGA1_c34320	0.14	+0.5
3,597,816	-		PGA1_c34320	0.19	-1.9
3,597,857	-		PGA1_c34320	0.23	+1.3
3,597,878	+		PGA1_c34320	0.25	+0.3
3,597,886	-		PGA1_c34320	0.26	-0.4
3,597,938	-		PGA1_c34320	0.31	+1.4
3,597,979	+		PGA1_c34320	0.35	+1.0
3,597,996	-		PGA1_c34320	0.37	+0.7
3,598,034	-		PGA1_c34320	0.40	-0.5
3,598,055	+		PGA1_c34320	0.42	+0.6
3,598,128	+		PGA1_c34320	0.49	+0.4
3,598,128	+		PGA1_c34320	0.49	+0.5
3,598,136	+		PGA1_c34320	0.50	-1.7
3,598,136	+		PGA1_c34320	0.50	+0.7
3,598,172	-		PGA1_c34320	0.54	+0.5
3,598,179	-		PGA1_c34320	0.54	-1.2
3,598,179	-		PGA1_c34320	0.54	-1.3
3,598,190	+		PGA1_c34320	0.55	-0.2
3,598,198	-		PGA1_c34320	0.56	+1.3
3,598,198	-		PGA1_c34320	0.56	+0.9
3,598,255	+		PGA1_c34320	0.62	+1.6
3,598,269	-		PGA1_c34320	0.63	+1.7
3,598,354	-		PGA1_c34320	0.71	-1.4
3,598,365	-		PGA1_c34320	0.72	+0.3
3,598,386	+		PGA1_c34320	0.75	+0.6
3,598,394	-		PGA1_c34320	0.75	+0.9
3,598,394	-		PGA1_c34320	0.75	+2.1
3,598,394	-		PGA1_c34320	0.75	+0.0
3,598,396	+		PGA1_c34320	0.76	+1.4
3,598,399	-		PGA1_c34320	0.76	+0.4
3,598,404	-		PGA1_c34320	0.76	-1.0
3,598,489	-		PGA1_c34320	0.85	-0.8
3,598,500	+		PGA1_c34320	0.86	-0.3
3,598,508	-		PGA1_c34320	0.86	-1.1
3,598,566	-				-0.5
3,598,566	-				+2.5
3,598,577	-				+0.5
3,598,614	-				+0.5
3,598,660	+				-1.8
3,598,660	+				+0.6
3,598,668	-				-2.0
3,598,761	-				-1.7
3,598,842	-		PGA1_c34330	0.15	+0.3
3,598,842	-		PGA1_c34330	0.15	-0.3
3,598,877	-		PGA1_c34330	0.18	+0.0
3,598,917	+		PGA1_c34330	0.21	+1.7
3,598,917	+		PGA1_c34330	0.21	+1.7
3,598,925	-		PGA1_c34330	0.22	+0.1
3,599,117	+		PGA1_c34330	0.38	+1.2
3,599,130	+		PGA1_c34330	0.39	+0.4
3,599,170	-		PGA1_c34330	0.43	+0.2
3,599,348	-		PGA1_c34330	0.58	-0.1
3,599,393	+		PGA1_c34330	0.62	+0.5
3,599,398	+		PGA1_c34330	0.62	+0.4
3,599,401	-		PGA1_c34330	0.62	-0.2
3,599,410	+		PGA1_c34330	0.63	-1.6
3,599,410	+		PGA1_c34330	0.63	-2.0
3,599,418	-		PGA1_c34330	0.64	-2.0
3,599,420	+		PGA1_c34330	0.64	+1.2
3,599,428	-		PGA1_c34330	0.64	-1.1
3,599,428	-		PGA1_c34330	0.64	+1.2
3,599,455	-		PGA1_c34330	0.67	+1.1
3,599,479	+		PGA1_c34330	0.69	+1.0
3,599,487	-		PGA1_c34330	0.69	-0.8
3,599,616	+		PGA1_c34330	0.80	-1.1
3,599,628	+		PGA1_c34330	0.81	+0.1