Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c34050

Experiment: Carbon source L-Ornithine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source L-Ornithine 5 mM
3,567,723	-		PGA1_c34040	0.39	-1.5
3,567,757	+		PGA1_c34040	0.41	+0.3
3,567,772	-		PGA1_c34040	0.42	+1.0
3,567,875	+		PGA1_c34040	0.49	-0.4
3,567,875	+		PGA1_c34040	0.49	+1.8
3,567,883	-		PGA1_c34040	0.49	-0.2
3,567,883	-		PGA1_c34040	0.49	+0.0
3,567,883	-		PGA1_c34040	0.49	-0.1
3,567,883	-		PGA1_c34040	0.49	+1.1
3,567,892	+		PGA1_c34040	0.50	-1.0
3,567,900	+		PGA1_c34040	0.50	-2.0
3,567,918	+		PGA1_c34040	0.51	-0.3
3,567,957	+		PGA1_c34040	0.54	+1.5
3,567,957	+		PGA1_c34040	0.54	-1.1
3,567,957	+		PGA1_c34040	0.54	+0.6
3,567,965	-		PGA1_c34040	0.54	-0.7
3,567,965	-		PGA1_c34040	0.54	+0.5
3,567,977	+		PGA1_c34040	0.55	+0.7
3,567,985	-		PGA1_c34040	0.56	+1.0
3,567,985	-		PGA1_c34040	0.56	+0.8
3,568,018	+		PGA1_c34040	0.58	+0.9
3,568,026	-		PGA1_c34040	0.58	-2.2
3,568,026	-		PGA1_c34040	0.58	+0.1
3,568,029	-		PGA1_c34040	0.58	+1.2
3,568,034	-		PGA1_c34040	0.59	-0.0
3,568,060	+		PGA1_c34040	0.60	-0.0
3,568,153	+		PGA1_c34040	0.66	+0.6
3,568,155	+		PGA1_c34040	0.67	-0.3
3,568,167	+		PGA1_c34040	0.67	-0.2
3,568,167	+		PGA1_c34040	0.67	-0.3
3,568,171	-		PGA1_c34040	0.68	+0.6
3,568,186	+		PGA1_c34040	0.69	-0.1
3,568,270	+		PGA1_c34040	0.74	-0.1
3,568,278	-		PGA1_c34040	0.74	+1.9
3,568,278	-		PGA1_c34040	0.74	+0.9
3,568,278	-		PGA1_c34040	0.74	+1.2
3,568,287	+		PGA1_c34040	0.75	-1.0
3,568,292	+		PGA1_c34040	0.75	+0.6
3,568,293	-		PGA1_c34040	0.75	+0.7
3,568,303	+		PGA1_c34040	0.76	-0.3
3,568,308	+		PGA1_c34040	0.76	-0.9
3,568,308	+		PGA1_c34040	0.76	+1.2
3,568,316	-		PGA1_c34040	0.77	-0.1
3,568,349	+		PGA1_c34040	0.79	+1.1
3,568,488	-		PGA1_c34040	0.88	+0.5
3,568,497	+		PGA1_c34040	0.89	-1.0
3,568,497	+		PGA1_c34040	0.89	+1.3
3,568,513	+		PGA1_c34040	0.90	+0.4
3,568,528	+				+0.9
3,568,557	-				+1.3
3,568,557	-				+0.7
3,568,568	-				-1.3
3,568,583	-				-0.8
3,568,604	+				+0.1
3,568,612	-				-0.9
3,568,631	+				-1.9
3,568,631	+				+0.3
3,568,665	-				+0.1
3,568,683	+				+0.4
3,568,760	+		PGA1_c34050	0.11	+0.6
3,568,768	-		PGA1_c34050	0.12	+1.7
3,568,797	+		PGA1_c34050	0.15	+0.4
3,568,850	-		PGA1_c34050	0.20	+1.1
3,568,904	+		PGA1_c34050	0.26	+0.9
3,568,928	+		PGA1_c34050	0.28	+0.1
3,568,982	-		PGA1_c34050	0.34	-0.8
3,568,994	+		PGA1_c34050	0.35	+1.7
3,568,994	+		PGA1_c34050	0.35	+1.1
3,568,994	+		PGA1_c34050	0.35	+0.5
3,569,002	-		PGA1_c34050	0.36	+0.7
3,569,002	-		PGA1_c34050	0.36	+0.2
3,569,002	-		PGA1_c34050	0.36	+0.7
3,569,002	-		PGA1_c34050	0.36	-0.8
3,569,002	-		PGA1_c34050	0.36	+0.7
3,569,002	-		PGA1_c34050	0.36	+0.0
3,569,002	-		PGA1_c34050	0.36	+0.4
3,569,029	+		PGA1_c34050	0.39	-2.3
3,569,034	+		PGA1_c34050	0.39	+1.4
3,569,132	-		PGA1_c34050	0.49	-0.4
3,569,151	-		PGA1_c34050	0.51	+2.2
3,569,151	-		PGA1_c34050	0.51	-0.1
3,569,154	+		PGA1_c34050	0.51	+1.2
3,569,162	-		PGA1_c34050	0.52	+0.9
3,569,195	+		PGA1_c34050	0.56	+0.8
3,569,203	-		PGA1_c34050	0.56	-2.9
3,569,266	+		PGA1_c34050	0.63	+2.0
3,569,266	+		PGA1_c34050	0.63	-1.0
3,569,274	-		PGA1_c34050	0.64	+0.6
3,569,274	-		PGA1_c34050	0.64	+1.8
3,569,296	+		PGA1_c34050	0.66	+0.7
3,569,305	-		PGA1_c34050	0.67	-1.4
3,569,313	+		PGA1_c34050	0.68	+0.9
3,569,383	+		PGA1_c34050	0.75	+0.3
3,569,428	-		PGA1_c34050	0.79	+0.0
3,569,456	+		PGA1_c34050	0.82	+1.0
3,569,456	+		PGA1_c34050	0.82	-1.2
3,569,464	-		PGA1_c34050	0.83	+0.3
3,569,583	-				+0.9
3,569,583	-				+0.3
3,569,601	-				-0.6
3,569,613	+				+1.3
3,569,614	+				+1.3
3,569,650	+				-0.1
3,569,658	-				+1.5
3,569,661	+				+0.6
3,569,688	+				-0.3
3,569,720	-				-0.0
3,569,738	+				-0.7
3,569,755	+				+0.7
3,569,762	+				+0.1
3,569,763	-				+1.2
3,569,800	-				+0.7
3,569,849	+				-2.1
3,569,849	+				-0.8
3,569,857	-				-2.4
3,569,857	-				-0.9
3,569,857	-				+0.5
3,569,880	+				-1.1
3,569,889	-				+0.5
3,569,952	+				-0.7
3,569,958	-				-2.2
3,569,979	+				-1.4
3,569,979	+				+0.5