Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c33770

Experiment: Carbon source L-Ornithine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source L-Ornithine 5 mM
3,539,275	+				+0.1
3,539,275	+				-1.2
3,539,275	+				+0.4
3,539,275	+				+0.5
3,539,275	+				-0.3
3,539,280	+				-2.3
3,539,280	+				+0.4
3,539,280	+				-0.8
3,539,280	+				+0.3
3,539,283	-				+0.6
3,539,283	-				+0.7
3,539,283	-				-0.3
3,539,283	-				+0.6
3,539,283	-				-2.0
3,539,283	-				+2.3
3,539,283	-				-1.3
3,539,287	+				+2.7
3,539,288	-				-0.9
3,539,288	-				+0.1
3,539,309	+		PGA1_c33760	0.12	+0.8
3,539,314	+		PGA1_c33760	0.12	+0.1
3,539,314	+		PGA1_c33760	0.12	-1.6
3,539,314	+		PGA1_c33760	0.12	+0.1
3,539,356	+		PGA1_c33760	0.16	+0.6
3,539,412	+		PGA1_c33760	0.21	+0.4
3,539,423	+		PGA1_c33760	0.23	+2.7
3,539,451	+		PGA1_c33760	0.25	+1.2
3,539,459	+		PGA1_c33760	0.26	+2.7
3,539,519	+		PGA1_c33760	0.32	-1.4
3,539,568	-		PGA1_c33760	0.36	+0.8
3,539,632	+		PGA1_c33760	0.42	+1.6
3,539,696	+		PGA1_c33760	0.48	-0.9
3,539,698	+		PGA1_c33760	0.49	-0.7
3,539,718	+		PGA1_c33760	0.50	-0.9
3,539,721	-		PGA1_c33760	0.51	+0.8
3,539,721	-		PGA1_c33760	0.51	-1.8
3,539,732	-		PGA1_c33760	0.52	-2.1
3,539,754	-		PGA1_c33760	0.54	-0.3
3,539,758	+		PGA1_c33760	0.54	+0.5
3,539,831	-		PGA1_c33760	0.61	+1.4
3,539,858	+		PGA1_c33760	0.64	-0.5
3,539,858	+		PGA1_c33760	0.64	+0.0
3,539,858	+		PGA1_c33760	0.64	-0.2
3,539,858	+		PGA1_c33760	0.64	+0.0
3,539,858	+		PGA1_c33760	0.64	+0.8
3,539,858	+		PGA1_c33760	0.64	+1.3
3,539,859	+		PGA1_c33760	0.64	+0.2
3,539,866	-		PGA1_c33760	0.64	-1.2
3,539,866	-		PGA1_c33760	0.64	+0.1
3,539,866	-		PGA1_c33760	0.64	+2.8
3,539,866	-		PGA1_c33760	0.64	+0.7
3,539,866	-		PGA1_c33760	0.64	-0.2
3,539,868	+		PGA1_c33760	0.65	+0.5
3,539,868	+		PGA1_c33760	0.65	+0.8
3,539,876	-		PGA1_c33760	0.65	+1.2
3,539,876	-		PGA1_c33760	0.65	+0.7
3,539,876	-		PGA1_c33760	0.65	-0.0
3,539,938	+		PGA1_c33760	0.71	+1.0
3,539,944	-		PGA1_c33760	0.72	+3.2
3,539,978	-		PGA1_c33760	0.75	-0.3
3,540,009	+		PGA1_c33760	0.78	+1.4
3,540,013	+		PGA1_c33760	0.78	+0.4
3,540,021	-		PGA1_c33760	0.79	-0.9
3,540,028	+		PGA1_c33760	0.80	-0.8
3,540,034	-		PGA1_c33760	0.80	-0.3
3,540,040	+		PGA1_c33760	0.81	+1.7
3,540,045	+		PGA1_c33760	0.81	-1.4
3,540,048	-		PGA1_c33760	0.82	-0.5
3,540,048	-		PGA1_c33760	0.82	+0.1
3,540,048	-		PGA1_c33760	0.82	-0.7
3,540,048	-		PGA1_c33760	0.82	+1.4
3,540,048	-		PGA1_c33760	0.82	-0.1
3,540,058	+		PGA1_c33760	0.83	-1.7
3,540,058	+		PGA1_c33760	0.83	-1.0
3,540,064	+		PGA1_c33760	0.83	-0.3
3,540,066	-		PGA1_c33760	0.83	-0.2
3,540,109	-		PGA1_c33760	0.88	+1.0
3,540,111	+		PGA1_c33760	0.88	-1.4
3,540,119	-		PGA1_c33760	0.88	+0.5
3,540,156	+				-0.5
3,540,175	+				+0.1
3,540,178	-				-0.5
3,540,184	+				-1.9
3,540,192	-				-0.0
3,540,209	-				+1.0
3,540,212	-				-1.9
3,540,216	+				+0.6
3,540,229	+				+0.7
3,540,234	+				-0.5
3,540,278	-				-0.3
3,540,280	-				-2.2
3,540,292	-				+0.8
3,540,344	+				+0.1
3,540,346	+				+1.1
3,540,352	+				+2.7
3,540,354	-				+0.6
3,540,364	-				-0.0
3,540,380	+				-0.5
3,540,384	+				+1.1
3,540,388	-				+0.4
3,540,388	-				-1.9
3,540,406	-		PGA1_c33770	0.11	+0.8
3,540,417	-		PGA1_c33770	0.12	+0.1
3,540,461	+		PGA1_c33770	0.14	+2.1
3,540,466	+		PGA1_c33770	0.15	+0.1
3,540,474	+		PGA1_c33770	0.15	-1.4
3,540,491	+		PGA1_c33770	0.16	-0.1
3,540,498	+		PGA1_c33770	0.17	+1.2
3,540,552	+		PGA1_c33770	0.20	-0.8
3,540,552	+		PGA1_c33770	0.20	+0.8
3,540,552	+		PGA1_c33770	0.20	+3.7
3,540,552	+		PGA1_c33770	0.20	-0.5
3,540,552	+		PGA1_c33770	0.20	-1.0
3,540,560	-		PGA1_c33770	0.21	-0.3
3,540,560	-		PGA1_c33770	0.21	-0.2
3,540,560	-		PGA1_c33770	0.21	+1.0
3,540,570	-		PGA1_c33770	0.21	-1.5
3,540,570	-		PGA1_c33770	0.21	-2.5
3,540,570	-		PGA1_c33770	0.21	+0.2
3,540,570	-		PGA1_c33770	0.21	-0.2
3,540,583	+		PGA1_c33770	0.22	-0.3
3,540,583	+		PGA1_c33770	0.22	+1.1
3,540,583	+		PGA1_c33770	0.22	+1.2
3,540,583	+		PGA1_c33770	0.22	+0.3
3,540,583	+		PGA1_c33770	0.22	-0.5
3,540,583	+		PGA1_c33770	0.22	-0.0
3,540,583	+		PGA1_c33770	0.22	+1.4
3,540,583	+		PGA1_c33770	0.22	+1.3
3,540,585	-		PGA1_c33770	0.22	+2.6
3,540,591	-		PGA1_c33770	0.23	+2.7
3,540,591	-		PGA1_c33770	0.23	-0.4
3,540,591	-		PGA1_c33770	0.23	+1.2
3,540,591	-		PGA1_c33770	0.23	+0.4
3,540,591	-		PGA1_c33770	0.23	-0.6
3,540,591	-		PGA1_c33770	0.23	-0.1
3,540,591	-		PGA1_c33770	0.23	-3.0
3,540,613	-		PGA1_c33770	0.24	+0.0
3,540,613	-		PGA1_c33770	0.24	+0.4
3,540,658	+		PGA1_c33770	0.27	+0.4
3,540,658	+		PGA1_c33770	0.27	+1.4
3,540,658	+		PGA1_c33770	0.27	-1.4
3,540,658	+		PGA1_c33770	0.27	+0.9
3,540,658	-		PGA1_c33770	0.27	-1.7
3,540,666	-		PGA1_c33770	0.28	+1.1
3,540,666	-		PGA1_c33770	0.28	+0.2
3,540,710	-		PGA1_c33770	0.30	+0.6
3,540,723	+		PGA1_c33770	0.31	+0.5
3,540,730	+		PGA1_c33770	0.32	+0.7
3,540,730	+		PGA1_c33770	0.32	-2.7
3,540,771	+		PGA1_c33770	0.34	+1.0
3,540,787	-		PGA1_c33770	0.35	-1.0
3,540,809	-		PGA1_c33770	0.37	-0.5
3,540,854	+		PGA1_c33770	0.40	-0.6
3,540,904	-		PGA1_c33770	0.43	-0.3
3,540,904	-		PGA1_c33770	0.43	+0.8
3,540,976	-		PGA1_c33770	0.48	-0.3
3,540,981	-		PGA1_c33770	0.48	-1.2
3,540,991	-		PGA1_c33770	0.49	+1.1
3,540,992	+		PGA1_c33770	0.49	+1.1
3,540,997	+		PGA1_c33770	0.49	+3.3
3,541,005	-		PGA1_c33770	0.50	+0.4
3,541,030	+		PGA1_c33770	0.51	+0.7
3,541,076	+		PGA1_c33770	0.54	+2.6
3,541,084	+		PGA1_c33770	0.55	+1.1
3,541,084	-		PGA1_c33770	0.55	-0.5
3,541,094	-		PGA1_c33770	0.55	-0.7
3,541,100	+		PGA1_c33770	0.56	-1.9
3,541,100	+		PGA1_c33770	0.56	+0.5
3,541,102	+		PGA1_c33770	0.56	+1.1
3,541,108	-		PGA1_c33770	0.56	-0.8
3,541,137	+		PGA1_c33770	0.58	+0.4
3,541,140	-		PGA1_c33770	0.58	+0.4
3,541,158	+		PGA1_c33770	0.59	+3.7
3,541,201	+		PGA1_c33770	0.62	+0.4
3,541,216	-		PGA1_c33770	0.63	-1.7
3,541,322	+		PGA1_c33770	0.70	-0.7
3,541,330	-		PGA1_c33770	0.70	+1.2
3,541,361	+		PGA1_c33770	0.72	+0.3
3,541,394	-		PGA1_c33770	0.75	+2.1
3,541,412	+		PGA1_c33770	0.76	-1.3
3,541,464	-		PGA1_c33770	0.79	+1.1
3,541,466	-		PGA1_c33770	0.79	-2.4
3,541,466	-		PGA1_c33770	0.79	-2.5
3,541,476	+		PGA1_c33770	0.80	-2.1
3,541,484	-		PGA1_c33770	0.80	-1.6
3,541,484	-		PGA1_c33770	0.80	+0.6
3,541,484	-		PGA1_c33770	0.80	-0.3
3,541,504	-		PGA1_c33770	0.82	+0.6
3,541,553	+		PGA1_c33770	0.85	-0.5
3,541,556	-		PGA1_c33770	0.85	+1.1
3,541,635	+				-1.5
3,541,644	+				-1.2
3,541,649	+				+0.1
3,541,654	+				+0.8
3,541,662	-				+0.1
3,541,734	+				+0.8
3,541,746	+				+1.9
3,541,770	-				+0.2
3,541,821	+				-0.1
3,541,837	+				+1.6
3,541,837	+				-0.1
3,541,843	+				+0.9
3,541,847	-				+0.6
3,541,874	+		PGA1_c33780	0.12	+0.7
3,541,874	+		PGA1_c33780	0.12	-0.9
3,541,874	+		PGA1_c33780	0.12	-1.7
3,541,882	-		PGA1_c33780	0.14	+2.7
3,541,882	-		PGA1_c33780	0.14	-1.1
3,541,882	-		PGA1_c33780	0.14	-0.9
3,541,909	+		PGA1_c33780	0.17	-0.3
3,541,916	+		PGA1_c33780	0.18	-2.4
3,541,916	+		PGA1_c33780	0.18	+0.6
3,541,917	-		PGA1_c33780	0.18	+0.1
3,541,921	+		PGA1_c33780	0.19	+0.7
3,541,924	-		PGA1_c33780	0.19	+0.4
3,541,924	-		PGA1_c33780	0.19	-3.1
3,541,933	+		PGA1_c33780	0.21	-1.1
3,541,936	-		PGA1_c33780	0.21	+0.3
3,541,941	-		PGA1_c33780	0.22	-2.3
3,541,951	-		PGA1_c33780	0.23	-1.7
3,541,952	-		PGA1_c33780	0.23	+0.7
3,541,982	-		PGA1_c33780	0.28	-0.2
3,541,992	-		PGA1_c33780	0.29	-0.8
3,542,083	+		PGA1_c33780	0.42	-0.3
3,542,084	-		PGA1_c33780	0.42	-0.9
3,542,091	-		PGA1_c33780	0.43	-0.3
3,542,092	+		PGA1_c33780	0.43	-1.4
3,542,093	+		PGA1_c33780	0.43	-0.5
3,542,100	-		PGA1_c33780	0.44	-1.7
3,542,100	-		PGA1_c33780	0.44	-0.9
3,542,100	-		PGA1_c33780	0.44	-0.0
3,542,132	-		PGA1_c33780	0.48	-0.6
3,542,196	+		PGA1_c33780	0.57	+1.5
3,542,206	+		PGA1_c33780	0.59	+0.5
3,542,206	+		PGA1_c33780	0.59	+2.3
3,542,279	-		PGA1_c33780	0.69	-1.7
3,542,279	-		PGA1_c33780	0.69	-0.7
3,542,290	-		PGA1_c33780	0.70	-0.4
3,542,359	+		PGA1_c33780	0.80	-0.3
3,542,359	+		PGA1_c33780	0.80	-0.5
3,542,363	+		PGA1_c33780	0.80	+0.6
3,542,367	-		PGA1_c33780	0.81	+0.9
3,542,371	+		PGA1_c33780	0.82	+0.5
3,542,379	-		PGA1_c33780	0.83	+0.1
3,542,402	+		PGA1_c33780	0.86	+0.3
3,542,406	+		PGA1_c33780	0.86	-1.1
3,542,406	+		PGA1_c33780	0.86	-1.0
3,542,406	+		PGA1_c33780	0.86	+0.5
3,542,406	+		PGA1_c33780	0.86	-1.5
3,542,406	+		PGA1_c33780	0.86	-1.5
3,542,414	-		PGA1_c33780	0.88	-1.4
3,542,425	+		PGA1_c33780	0.89	-0.3
3,542,465	-				+0.5
3,542,467	+				-0.4
3,542,467	+				-1.5
3,542,467	+				+1.1
3,542,467	+				+0.7
3,542,467	+				+0.7
3,542,467	+				-0.3
3,542,467	+				-0.8
3,542,467	+				+2.0
3,542,467	+				+0.7
3,542,467	+				+0.5
3,542,467	+				+1.7
3,542,467	+				+1.4
3,542,467	+				-0.7
3,542,467	+				-0.7
3,542,475	-				-0.5
3,542,475	-				-1.1
3,542,475	-				+1.3
3,542,475	-				-0.2
3,542,475	-				-1.9
3,542,475	-				+0.9
3,542,475	-				+0.6
3,542,475	-				+0.6
3,542,475	-				-1.1
3,542,475	-				+1.3
3,542,475	-				-0.3
3,542,475	-				+0.2
3,542,475	-				-1.9
3,542,475	-				-1.0
3,542,475	-				+0.1
3,542,510	+				+0.7
3,542,510	+				-0.5
3,542,510	+				-1.0
3,542,518	-				-2.0
3,542,518	-				+2.1
3,542,518	-				+0.2
3,542,556	+				-2.0
3,542,628	+				+0.1
3,542,628	+				+0.1
3,542,636	-				+1.0
3,542,650	+				-0.0
3,542,655	+				+0.7
3,542,658	-				+0.3
3,542,663	+				-0.7
3,542,671	-				-0.0
3,542,699	+				+0.3
3,542,701	+				-2.1
3,542,701	+				+0.5
3,542,701	+				-1.3
3,542,701	+				-1.4
3,542,701	+				-1.1
3,542,701	+				-0.1
3,542,701	+				-0.4
3,542,701	+				+0.3
3,542,701	+				+0.3
3,542,701	+				-1.5
3,542,701	+				+1.8
3,542,701	+				+1.5
3,542,701	+				-0.1
3,542,701	+				-1.6
3,542,701	+				-0.1
3,542,701	+				+0.5
3,542,701	+				-1.7
3,542,701	+				-1.7
3,542,701	+				-0.2
3,542,701	+				-0.7
3,542,709	-				+0.1
3,542,709	-				-1.0
3,542,709	-				+0.5
3,542,709	-				+1.1
3,542,709	-				-0.7
3,542,709	-				+0.3
3,542,709	-				-0.3
3,542,709	-				-0.1
3,542,728	-				-1.3
3,542,751	+				-1.4
3,542,759	-				+0.3
3,542,764	-				-1.6
3,542,774	+				-0.0
3,542,787	-				-0.6