Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c33740

Experiment: Carbon source L-Ornithine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source L-Ornithine 5 mM
3,535,991	-				-2.9
3,536,013	-				-1.8
3,536,015	+				-2.0
3,536,015	+				+1.0
3,536,023	-				-0.9
3,536,082	-				-0.7
3,536,128	-				+0.2
3,536,128	-				+0.3
3,536,145	+		PGA1_c33730	0.11	+1.1
3,536,165	+		PGA1_c33730	0.14	-1.6
3,536,246	-		PGA1_c33730	0.25	+1.1
3,536,248	+		PGA1_c33730	0.26	+2.1
3,536,251	-		PGA1_c33730	0.26	+0.7
3,536,282	+		PGA1_c33730	0.30	+0.8
3,536,290	-		PGA1_c33730	0.31	-1.3
3,536,291	-		PGA1_c33730	0.32	+2.7
3,536,291	-		PGA1_c33730	0.32	-0.6
3,536,309	+		PGA1_c33730	0.34	-0.2
3,536,317	+		PGA1_c33730	0.35	+1.1
3,536,329	+		PGA1_c33730	0.37	-0.9
3,536,329	+		PGA1_c33730	0.37	-1.8
3,536,329	+		PGA1_c33730	0.37	+0.6
3,536,329	+		PGA1_c33730	0.37	+0.5
3,536,332	-		PGA1_c33730	0.37	-0.7
3,536,337	-		PGA1_c33730	0.38	+1.3
3,536,337	-		PGA1_c33730	0.38	-0.5
3,536,337	-		PGA1_c33730	0.38	-0.2
3,536,354	+		PGA1_c33730	0.40	+1.1
3,536,362	-		PGA1_c33730	0.41	-2.2
3,536,423	+		PGA1_c33730	0.50	-0.6
3,536,431	-		PGA1_c33730	0.51	-0.1
3,536,452	-		PGA1_c33730	0.54	-1.5
3,536,459	+		PGA1_c33730	0.55	+0.7
3,536,468	+		PGA1_c33730	0.56	-1.9
3,536,468	+		PGA1_c33730	0.56	-0.0
3,536,468	+		PGA1_c33730	0.56	-0.7
3,536,470	+		PGA1_c33730	0.56	-0.7
3,536,476	-		PGA1_c33730	0.57	+0.7
3,536,476	-		PGA1_c33730	0.57	+0.4
3,536,478	+		PGA1_c33730	0.58	-1.3
3,536,486	-		PGA1_c33730	0.59	+0.4
3,536,497	-		PGA1_c33730	0.60	-1.7
3,536,542	-		PGA1_c33730	0.67	-0.7
3,536,606	-		PGA1_c33730	0.75	-0.1
3,536,609	+		PGA1_c33730	0.76	+1.2
3,536,609	+		PGA1_c33730	0.76	-0.3
3,536,612	+		PGA1_c33730	0.76	+0.2
3,536,637	-		PGA1_c33730	0.80	+1.1
3,536,664	+		PGA1_c33730	0.84	+0.6
3,536,684	+		PGA1_c33730	0.86	-0.8
3,536,789	+				-0.1
3,536,792	-				+0.5
3,536,840	+				-1.1
3,536,840	+				+0.9
3,536,840	+				+0.6
3,536,846	-				+0.6
3,536,848	-				-1.7
3,536,848	-				+1.1
3,536,848	-				+0.4
3,536,848	-				-0.2
3,536,848	-				-1.7
3,536,848	-				-0.9
3,536,848	-				+0.1
3,536,848	-				+0.6
3,536,848	-				-2.0
3,536,848	-				+0.6
3,536,848	-				+0.6
3,536,848	-				+0.1
3,536,854	+				-1.1
3,536,859	+				+1.0
3,536,859	+				+0.7
3,536,867	+				-0.6
3,536,867	-				-0.3
3,536,875	-				+0.9
3,536,925	+				-1.4
3,536,929	-				-0.8
3,536,941	-				+0.0
3,537,032	+				+0.5
3,537,032	+				+0.7
3,537,037	+				+0.6
3,537,037	+				-1.9
3,537,037	+				+0.5
3,537,037	+				-0.9
3,537,040	-				+1.0
3,537,057	+				-1.3
3,537,057	+				+0.2
3,537,065	-				-0.5
3,537,065	-				+0.4
3,537,065	-				-1.3
3,537,181	+		PGA1_c33740	0.22	+1.0
3,537,201	-		PGA1_c33740	0.24	+0.0
3,537,218	+		PGA1_c33740	0.26	-0.3
3,537,225	+		PGA1_c33740	0.27	-0.9
3,537,226	+		PGA1_c33740	0.27	-0.1
3,537,231	+		PGA1_c33740	0.28	+1.4
3,537,234	-		PGA1_c33740	0.28	-0.3
3,537,236	+		PGA1_c33740	0.28	-0.5
3,537,238	-		PGA1_c33740	0.28	+0.9
3,537,307	+		PGA1_c33740	0.36	+0.2
3,537,313	+		PGA1_c33740	0.37	+0.1
3,537,313	+		PGA1_c33740	0.37	+0.2
3,537,321	-		PGA1_c33740	0.38	+1.8
3,537,361	-		PGA1_c33740	0.42	+0.0
3,537,368	+		PGA1_c33740	0.43	-0.8
3,537,403	-		PGA1_c33740	0.47	+0.6
3,537,438	+		PGA1_c33740	0.51	+0.5
3,537,438	+		PGA1_c33740	0.51	+1.3
3,537,438	+		PGA1_c33740	0.51	+2.7
3,537,446	-		PGA1_c33740	0.52	-0.3
3,537,456	-		PGA1_c33740	0.53	+0.5
3,537,463	-		PGA1_c33740	0.54	+0.0
3,537,463	-		PGA1_c33740	0.54	+2.1
3,537,463	-		PGA1_c33740	0.54	+0.5
3,537,468	+		PGA1_c33740	0.54	+3.2
3,537,468	+		PGA1_c33740	0.54	-0.5
3,537,469	-		PGA1_c33740	0.55	+1.0
3,537,471	+		PGA1_c33740	0.55	-0.5
3,537,476	-		PGA1_c33740	0.55	+2.0
3,537,476	-		PGA1_c33740	0.55	-1.5
3,537,476	-		PGA1_c33740	0.55	-0.0
3,537,476	-		PGA1_c33740	0.55	+1.3
3,537,476	-		PGA1_c33740	0.55	+2.1
3,537,476	-		PGA1_c33740	0.55	+0.8
3,537,479	+		PGA1_c33740	0.56	+0.8
3,537,479	+		PGA1_c33740	0.56	+1.8
3,537,479	+		PGA1_c33740	0.56	-0.5
3,537,487	-		PGA1_c33740	0.57	-1.3
3,537,506	-		PGA1_c33740	0.59	-0.9
3,537,506	-		PGA1_c33740	0.59	-2.7
3,537,607	+		PGA1_c33740	0.70	+0.4
3,537,615	-		PGA1_c33740	0.71	-0.3
3,537,627	+		PGA1_c33740	0.72	+0.3
3,537,629	+		PGA1_c33740	0.73	-0.0
3,537,637	-		PGA1_c33740	0.74	-0.9
3,537,637	-		PGA1_c33740	0.74	-1.9
3,537,674	+		PGA1_c33740	0.78	+0.3
3,537,682	+		PGA1_c33740	0.79	-0.1
3,537,682	+		PGA1_c33740	0.79	+0.7
3,537,827	-				-1.3
3,537,859	+				-2.4
3,537,859	+				-0.7
3,537,867	-				-1.6
3,537,872	-				-1.5
3,537,874	-				+0.3
3,537,874	-				+0.4
3,537,876	+				-0.0
3,537,876	+				+0.8
3,537,876	+				-0.9
3,537,876	+				-0.2
3,537,876	+				+0.9
3,537,876	+				+0.7
3,537,876	+				-2.2
3,537,876	+				-0.5
3,537,876	+				+1.8
3,537,876	+				+0.6
3,537,884	-				-2.1
3,537,884	-				+1.1
3,537,884	-				-0.7
3,537,884	-				+1.7
3,537,884	-				-0.1
3,537,884	-				-1.3
3,537,886	+				-0.5
3,537,886	+				+0.9
3,537,900	+				+1.0
3,537,905	+				+1.7
3,537,905	+				+0.1
3,537,905	+				+0.1
3,537,913	-				-1.6
3,537,918	-				-2.0
3,537,969	-				+0.7
3,537,982	-				+0.5
3,538,006	+				+1.7
3,538,006	+				+0.1
3,538,006	+				-0.7
3,538,006	+				+3.1
3,538,006	+				-1.4
3,538,006	+				-1.7
3,538,006	+				+1.6
3,538,006	+				-1.3
3,538,006	+				+0.2
3,538,006	+				+0.3
3,538,006	+				-1.2
3,538,006	+				+0.3
3,538,006	+				+0.6
3,538,014	-				+0.4
3,538,014	-				-0.1
3,538,014	-				+0.3
3,538,014	-				-0.4
3,538,014	-				-0.9
3,538,014	-				+1.8
3,538,014	-				-0.7
3,538,014	-				-1.3
3,538,014	-				+0.1
3,538,014	-				+1.3
3,538,014	-				-0.1
3,538,014	-				-1.7
3,538,014	-				-0.7
3,538,014	-				+0.1
3,538,014	-				-0.1
3,538,014	-				+2.5
3,538,014	-				-0.3
3,538,014	-				-0.3
3,538,014	-				-0.5
3,538,014	-				-2.5
3,538,014	-				-0.4
3,538,014	-				-2.5
3,538,014	-				-1.1
3,538,014	-				+0.0
3,538,014	-				-0.4
3,538,014	-				+1.3
3,538,014	-				+0.6
3,538,014	-				-0.4
3,538,014	-				+0.7
3,538,014	-				+0.1
3,538,014	-				-0.2
3,538,014	-				-1.9
3,538,014	-				+0.1
3,538,023	-				-1.0
3,538,023	-				+0.1
3,538,025	+				-2.2
3,538,030	+				+1.2
3,538,033	-				+0.7
3,538,038	-				-0.5
3,538,044	+				+1.7
3,538,044	+				-0.0
3,538,049	+				-1.7
3,538,049	+				+1.6
3,538,049	+				-0.5
3,538,049	+				-1.0
3,538,049	+				+0.6
3,538,049	+				-0.5
3,538,052	-				+2.0
3,538,052	-				+0.6
3,538,052	-				-0.4
3,538,054	+				-0.9
3,538,055	+				-1.1
3,538,057	-				+1.1
3,538,057	-				-0.7
3,538,063	-				-0.9
3,538,070	-				+0.1
3,538,117	+				-1.3
3,538,117	+				+1.2
3,538,117	+				+1.1
3,538,117	+				-0.0
3,538,117	+				+0.9
3,538,117	+				-0.6
3,538,125	+				-0.2
3,538,125	+				-0.1
3,538,125	+				-0.3
3,538,125	+				+0.5
3,538,125	-				-0.7
3,538,125	-				+0.1
3,538,125	-				-0.4
3,538,128	-				-0.7
3,538,176	+				-0.2
3,538,176	-				-1.4
3,538,178	-				-0.3
3,538,178	-				+0.7
3,538,193	+				-0.3
3,538,214	+				-0.0
3,538,215	+				+1.7
3,538,222	-				-0.9
3,538,222	-				+1.1
3,538,222	-				-0.9
3,538,222	-				-1.6
3,538,241	-		PGA1_c33750	0.11	+0.9
3,538,251	-		PGA1_c33750	0.12	+0.1
3,538,262	+		PGA1_c33750	0.13	-2.3
3,538,262	+		PGA1_c33750	0.13	-3.0
3,538,301	+		PGA1_c33750	0.17	-0.0
3,538,314	+		PGA1_c33750	0.18	-0.5
3,538,342	+		PGA1_c33750	0.21	+2.1
3,538,347	+		PGA1_c33750	0.22	-0.5
3,538,352	+		PGA1_c33750	0.22	+0.4
3,538,352	+		PGA1_c33750	0.22	+0.1
3,538,352	+		PGA1_c33750	0.22	-0.1
3,538,352	+		PGA1_c33750	0.22	-1.1
3,538,352	+		PGA1_c33750	0.22	-1.9
3,538,352	+		PGA1_c33750	0.22	-1.2
3,538,352	+		PGA1_c33750	0.22	-1.5
3,538,352	+		PGA1_c33750	0.22	-2.3
3,538,352	+		PGA1_c33750	0.22	-0.6
3,538,352	+		PGA1_c33750	0.22	-1.2
3,538,352	+		PGA1_c33750	0.22	-1.9
3,538,352	+		PGA1_c33750	0.22	+0.4
3,538,352	+		PGA1_c33750	0.22	+0.6
3,538,352	+		PGA1_c33750	0.22	+3.2
3,538,352	+		PGA1_c33750	0.22	-0.8
3,538,352	+		PGA1_c33750	0.22	+0.1
3,538,355	-		PGA1_c33750	0.23	-0.2
3,538,360	-		PGA1_c33750	0.23	+1.1
3,538,360	-		PGA1_c33750	0.23	+0.2
3,538,360	-		PGA1_c33750	0.23	-0.3
3,538,360	-		PGA1_c33750	0.23	+0.5
3,538,360	-		PGA1_c33750	0.23	-1.5
3,538,360	-		PGA1_c33750	0.23	-0.7
3,538,360	-		PGA1_c33750	0.23	+1.3
3,538,360	-		PGA1_c33750	0.23	-0.1
3,538,360	-		PGA1_c33750	0.23	-1.3
3,538,360	-		PGA1_c33750	0.23	-2.6
3,538,360	-		PGA1_c33750	0.23	+0.7
3,538,360	-		PGA1_c33750	0.23	+0.8
3,538,360	-		PGA1_c33750	0.23	-0.8
3,538,360	-		PGA1_c33750	0.23	-1.3
3,538,360	-		PGA1_c33750	0.23	-0.8
3,538,360	-		PGA1_c33750	0.23	-1.0
3,538,360	-		PGA1_c33750	0.23	+1.8
3,538,360	-		PGA1_c33750	0.23	+0.5
3,538,360	-		PGA1_c33750	0.23	+0.3
3,538,360	-		PGA1_c33750	0.23	-0.5
3,538,360	-		PGA1_c33750	0.23	-0.9
3,538,360	-		PGA1_c33750	0.23	+2.4
3,538,360	-		PGA1_c33750	0.23	-0.9
3,538,360	-		PGA1_c33750	0.23	+1.2
3,538,360	-		PGA1_c33750	0.23	-1.7
3,538,375	+		PGA1_c33750	0.25	-0.6
3,538,378	-		PGA1_c33750	0.25	-0.9
3,538,382	+		PGA1_c33750	0.25	+0.1
3,538,383	-		PGA1_c33750	0.25	+0.2
3,538,433	+		PGA1_c33750	0.31	-0.8
3,538,433	-		PGA1_c33750	0.31	+0.8
3,538,438	+		PGA1_c33750	0.31	-1.4
3,538,438	+		PGA1_c33750	0.31	-0.3
3,538,446	-		PGA1_c33750	0.32	-1.3
3,538,446	-		PGA1_c33750	0.32	-1.9
3,538,506	+		PGA1_c33750	0.38	-3.2
3,538,530	+		PGA1_c33750	0.41	+1.4
3,538,538	-		PGA1_c33750	0.42	+1.9
3,538,557	+		PGA1_c33750	0.43	+0.7
3,538,557	+		PGA1_c33750	0.43	-1.8
3,538,557	+		PGA1_c33750	0.43	+0.1
3,538,557	+		PGA1_c33750	0.43	+0.8
3,538,559	+		PGA1_c33750	0.44	+0.0
3,538,559	+		PGA1_c33750	0.44	+0.5
3,538,613	+		PGA1_c33750	0.49	-0.3
3,538,633	+		PGA1_c33750	0.51	-0.9
3,538,634	+		PGA1_c33750	0.51	-0.1
3,538,634	+		PGA1_c33750	0.51	-0.5
3,538,635	+		PGA1_c33750	0.52	-2.3
3,538,635	+		PGA1_c33750	0.52	-1.6
3,538,643	-		PGA1_c33750	0.52	-1.0
3,538,656	-		PGA1_c33750	0.54	+1.4
3,538,710	+		PGA1_c33750	0.59	-1.8
3,538,718	+		PGA1_c33750	0.60	+0.9
3,538,718	+		PGA1_c33750	0.60	+1.7
3,538,720	+		PGA1_c33750	0.60	+1.4
3,538,726	-		PGA1_c33750	0.61	+0.4
3,538,728	-		PGA1_c33750	0.61	-0.9
3,538,728	-		PGA1_c33750	0.61	-0.1
3,538,730	+		PGA1_c33750	0.61	-0.8
3,538,730	+		PGA1_c33750	0.61	+0.3
3,538,730	+		PGA1_c33750	0.61	+1.0
3,538,731	+		PGA1_c33750	0.61	+1.4
3,538,731	+		PGA1_c33750	0.61	-0.7
3,538,731	+		PGA1_c33750	0.61	+0.1
3,538,731	+		PGA1_c33750	0.61	-1.6
3,538,731	+		PGA1_c33750	0.61	+0.4
3,538,731	+		PGA1_c33750	0.61	+0.5
3,538,731	+		PGA1_c33750	0.61	-1.3
3,538,731	+		PGA1_c33750	0.61	+2.1
3,538,738	-		PGA1_c33750	0.62	-0.6
3,538,738	-		PGA1_c33750	0.62	+0.7
3,538,738	-		PGA1_c33750	0.62	+1.2
3,538,738	-		PGA1_c33750	0.62	+0.3
3,538,738	-		PGA1_c33750	0.62	-0.4
3,538,738	-		PGA1_c33750	0.62	-2.3
3,538,739	-		PGA1_c33750	0.62	+0.3
3,538,739	-		PGA1_c33750	0.62	+0.4
3,538,739	-		PGA1_c33750	0.62	-1.3
3,538,739	-		PGA1_c33750	0.62	+0.1
3,538,739	-		PGA1_c33750	0.62	+0.2
3,538,739	-		PGA1_c33750	0.62	+0.2
3,538,739	-		PGA1_c33750	0.62	-2.3
3,538,739	-		PGA1_c33750	0.62	-1.4
3,538,753	+		PGA1_c33750	0.64	-0.6
3,538,778	-		PGA1_c33750	0.66	-0.5
3,538,787	+		PGA1_c33750	0.67	+0.6
3,538,849	-		PGA1_c33750	0.74	+0.8
3,538,849	-		PGA1_c33750	0.74	+1.2
3,538,849	-		PGA1_c33750	0.74	+0.3
3,538,850	-		PGA1_c33750	0.74	-2.2