Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c33710

Experiment: Carbon source L-Ornithine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source L-Ornithine 5 mM
3,532,932	+		PGA1_c33700	0.57	+0.5
3,532,932	+		PGA1_c33700	0.57	+0.4
3,532,998	+		PGA1_c33700	0.62	-2.0
3,533,036	-		PGA1_c33700	0.64	+0.9
3,533,054	+		PGA1_c33700	0.65	+0.3
3,533,054	+		PGA1_c33700	0.65	-0.1
3,533,054	+		PGA1_c33700	0.65	+1.7
3,533,054	+		PGA1_c33700	0.65	-1.0
3,533,054	-		PGA1_c33700	0.65	-2.9
3,533,062	-		PGA1_c33700	0.66	-0.6
3,533,062	-		PGA1_c33700	0.66	-2.7
3,533,062	-		PGA1_c33700	0.66	-2.7
3,533,087	+		PGA1_c33700	0.67	-0.5
3,533,119	+		PGA1_c33700	0.69	-0.5
3,533,119	+		PGA1_c33700	0.69	+1.1
3,533,187	+		PGA1_c33700	0.73	-0.6
3,533,187	+		PGA1_c33700	0.73	+0.5
3,533,187	+		PGA1_c33700	0.73	-0.9
3,533,192	+		PGA1_c33700	0.74	+1.5
3,533,195	-		PGA1_c33700	0.74	+0.2
3,533,195	-		PGA1_c33700	0.74	+1.1
3,533,200	-		PGA1_c33700	0.74	+1.1
3,533,200	-		PGA1_c33700	0.74	-0.9
3,533,200	-		PGA1_c33700	0.74	+0.6
3,533,200	-		PGA1_c33700	0.74	-1.3
3,533,200	-		PGA1_c33700	0.74	-1.1
3,533,200	-		PGA1_c33700	0.74	-1.8
3,533,200	-		PGA1_c33700	0.74	+2.1
3,533,200	-		PGA1_c33700	0.74	+1.3
3,533,206	+		PGA1_c33700	0.75	-0.3
3,533,208	-		PGA1_c33700	0.75	-0.5
3,533,273	+		PGA1_c33700	0.79	+0.6
3,533,291	+		PGA1_c33700	0.80	-0.9
3,533,299	-		PGA1_c33700	0.80	+0.1
3,533,355	-		PGA1_c33700	0.84	-0.4
3,533,364	-		PGA1_c33700	0.84	+1.5
3,533,445	-		PGA1_c33700	0.90	-0.2
3,533,465	-				-1.4
3,533,481	-				+0.2
3,533,525	+				-0.4
3,533,533	-				+0.6
3,533,533	-				+0.5
3,533,565	-				+0.6
3,533,565	-				+0.5
3,533,591	+				+0.3
3,533,591	+				-0.3
3,533,591	+				-2.2
3,533,591	+				-0.2
3,533,591	+				-0.7
3,533,591	+				+0.1
3,533,591	+				-1.5
3,533,591	+				-0.6
3,533,591	+				-2.3
3,533,591	+				+0.6
3,533,591	+				+1.5
3,533,591	+				-0.7
3,533,599	-				-0.0
3,533,599	-				-2.3
3,533,599	-				-0.4
3,533,599	-				-2.3
3,533,599	-				+0.1
3,533,599	-				-1.5
3,533,599	-				-0.3
3,533,599	-				+0.5
3,533,599	-				+0.1
3,533,599	-				+0.4
3,533,599	-				-1.3
3,533,599	-				-1.6
3,533,604	+				-0.5
3,533,604	+				+0.3
3,533,604	+				+0.7
3,533,604	+				+0.8
3,533,604	+				-1.7
3,533,604	+				+2.1
3,533,604	+				+0.4
3,533,604	+				-0.1
3,533,604	+				+0.9
3,533,604	+				+0.6
3,533,604	+				-0.6
3,533,604	+				-1.8
3,533,604	+				+1.2
3,533,604	+				-0.8
3,533,604	+				+1.2
3,533,604	+				+0.3
3,533,604	+				-0.5
3,533,604	+				+0.7
3,533,604	+				-0.4
3,533,604	+				+0.1
3,533,604	+				-0.4
3,533,604	+				-1.2
3,533,604	+				-1.2
3,533,607	-				-0.4
3,533,612	-				-0.7
3,533,612	-				+0.7
3,533,612	-				+0.3
3,533,612	-				-1.8
3,533,612	-				+1.0
3,533,612	-				-0.7
3,533,612	-				-0.9
3,533,612	-				-0.4
3,533,612	-				-0.9
3,533,612	-				+0.0
3,533,612	-				-0.3
3,533,612	-				+0.5
3,533,612	-				+0.4
3,533,612	-				+3.4
3,533,612	-				+1.0
3,533,612	-				+0.6
3,533,612	-				-0.3
3,533,612	-				+1.5
3,533,612	-				-0.1
3,533,612	-				-1.5
3,533,612	-				+0.2
3,533,612	-				-0.9
3,533,612	-				-0.7
3,533,612	-				+0.3
3,533,612	-				+0.6
3,533,612	-				-1.3
3,533,612	-				-1.6
3,533,612	-				-1.0
3,533,612	-				+0.1
3,533,612	-				+0.6
3,533,612	-				-3.1
3,533,613	+				-0.1
3,533,657	+				-0.2
3,533,689	+				-1.8
3,533,689	+				-1.1
3,533,689	+				-1.8
3,533,689	+				-3.1
3,533,689	+				+0.6
3,533,689	+				-0.3
3,533,689	+				-1.6
3,533,689	+				+1.5
3,533,689	+				+1.1
3,533,689	+				+0.9
3,533,697	-				+1.7
3,533,697	-				-0.3
3,533,697	-				-0.6
3,533,697	-				+0.4
3,533,697	-				+0.6
3,533,697	-				-1.4
3,533,697	-				+1.1
3,533,697	-				-2.7
3,533,697	-				-0.4
3,533,697	-				+0.8
3,533,706	-				-0.0
3,533,723	-				+0.2
3,533,725	+				-0.3
3,533,730	+				-2.9
3,533,732	+				+0.5
3,533,740	-				-0.3
3,533,781	+				+2.5
3,533,781	+				+0.2
3,533,781	+				+1.1
3,533,784	-				-1.0
3,533,823	+				-0.2
3,533,823	+				+0.8
3,533,823	+				+1.7
3,533,823	+				-2.6
3,533,823	+				+0.3
3,533,823	+				-0.7
3,533,823	+				-0.7
3,533,823	+				+2.7
3,533,829	-				+0.2
3,533,831	-				+0.5
3,533,831	-				-0.3
3,533,831	-				-1.3
3,533,831	-				+0.1
3,533,831	-				+0.0
3,533,831	-				-0.4
3,533,831	-				+0.8
3,533,831	-				-0.5
3,533,831	-				+1.3
3,533,831	-				-1.5
3,533,831	-				-0.8
3,533,831	-				+0.5
3,533,831	-				-0.9
3,533,870	+				-0.2
3,533,878	+				+0.7
3,533,878	-				+0.7
3,533,930	-				-0.3
3,533,943	-				+2.2
3,533,943	-				-0.7
3,533,965	+				+2.1
3,533,965	+				+0.6
3,533,973	-				+0.1
3,533,973	-				-2.0
3,533,973	-				+0.9
3,533,973	-				-2.6
3,533,973	-				+0.4
3,533,973	-				-0.1
3,533,975	+				-0.2
3,533,975	+				+1.2
3,533,983	-				-0.3
3,533,983	-				-0.0
3,533,983	-				-0.2
3,533,983	-				+1.5
3,533,994	+				+1.1
3,534,025	+				-0.7
3,534,025	+				-0.5
3,534,025	-				+1.0
3,534,033	-		PGA1_c33710	0.10	-0.6
3,534,066	+		PGA1_c33710	0.14	+1.4
3,534,066	+		PGA1_c33710	0.14	+0.0
3,534,066	+		PGA1_c33710	0.14	-0.1
3,534,068	-		PGA1_c33710	0.14	-0.5
3,534,069	-		PGA1_c33710	0.14	-1.0
3,534,070	+		PGA1_c33710	0.14	+0.4
3,534,070	+		PGA1_c33710	0.14	+0.6
3,534,073	-		PGA1_c33710	0.14	-1.5
3,534,073	-		PGA1_c33710	0.14	-1.7
3,534,073	-		PGA1_c33710	0.14	-0.7
3,534,089	+		PGA1_c33710	0.16	-1.0
3,534,089	+		PGA1_c33710	0.16	-1.6
3,534,089	+		PGA1_c33710	0.16	+0.6
3,534,097	-		PGA1_c33710	0.17	+1.3
3,534,097	-		PGA1_c33710	0.17	+0.4
3,534,103	-		PGA1_c33710	0.17	+0.4
3,534,135	-		PGA1_c33710	0.21	-0.0
3,534,145	-		PGA1_c33710	0.22	-2.1
3,534,209	+		PGA1_c33710	0.28	+1.7
3,534,212	+		PGA1_c33710	0.28	-1.9
3,534,212	+		PGA1_c33710	0.28	+0.1
3,534,255	+		PGA1_c33710	0.33	+1.2
3,534,271	+		PGA1_c33710	0.34	-0.1
3,534,273	+		PGA1_c33710	0.35	-0.1
3,534,278	+		PGA1_c33710	0.35	-0.5
3,534,330	-		PGA1_c33710	0.40	-3.1
3,534,352	+		PGA1_c33710	0.42	-1.1
3,534,371	+		PGA1_c33710	0.44	-0.6
3,534,374	-		PGA1_c33710	0.45	-0.4
3,534,379	-		PGA1_c33710	0.45	-1.6
3,534,420	+		PGA1_c33710	0.49	+0.9
3,534,426	+		PGA1_c33710	0.50	+0.2
3,534,433	-		PGA1_c33710	0.51	-2.5
3,534,475	+		PGA1_c33710	0.55	+0.9
3,534,475	+		PGA1_c33710	0.55	-0.2
3,534,475	+		PGA1_c33710	0.55	-0.4
3,534,475	+		PGA1_c33710	0.55	+1.2
3,534,475	+		PGA1_c33710	0.55	-0.9
3,534,477	-		PGA1_c33710	0.55	-0.0
3,534,483	-		PGA1_c33710	0.56	-0.7
3,534,483	-		PGA1_c33710	0.56	+0.4
3,534,483	-		PGA1_c33710	0.56	+2.1
3,534,485	+		PGA1_c33710	0.56	+1.5
3,534,543	+		PGA1_c33710	0.62	+0.7
3,534,556	+		PGA1_c33710	0.63	-2.0
3,534,564	-		PGA1_c33710	0.64	-1.3
3,534,566	-		PGA1_c33710	0.64	-1.8
3,534,577	-		PGA1_c33710	0.65	-1.2
3,534,600	+		PGA1_c33710	0.67	-0.6
3,534,604	+		PGA1_c33710	0.68	+0.2
3,534,607	-		PGA1_c33710	0.68	+1.1
3,534,609	+		PGA1_c33710	0.68	+1.7
3,534,609	+		PGA1_c33710	0.68	+0.1
3,534,609	+		PGA1_c33710	0.68	-2.5
3,534,612	+		PGA1_c33710	0.69	-1.4
3,534,614	+		PGA1_c33710	0.69	+0.7
3,534,614	+		PGA1_c33710	0.69	+1.4
3,534,617	-		PGA1_c33710	0.69	-0.8
3,534,619	+		PGA1_c33710	0.69	+1.8
3,534,619	+		PGA1_c33710	0.69	-1.6
3,534,622	-		PGA1_c33710	0.70	-1.4
3,534,622	-		PGA1_c33710	0.70	-0.5
3,534,622	-		PGA1_c33710	0.70	-1.7
3,534,622	-		PGA1_c33710	0.70	-0.0
3,534,622	-		PGA1_c33710	0.70	-1.5
3,534,622	-		PGA1_c33710	0.70	+0.7
3,534,622	-		PGA1_c33710	0.70	-1.2
3,534,627	-		PGA1_c33710	0.70	+0.5
3,534,627	-		PGA1_c33710	0.70	-0.6
3,534,663	+		PGA1_c33710	0.74	+0.8
3,534,708	+		PGA1_c33710	0.78	-1.3
3,534,716	-		PGA1_c33710	0.79	+0.5
3,534,735	-		PGA1_c33710	0.81	+0.7
3,534,738	+		PGA1_c33710	0.81	-0.3
3,534,738	+		PGA1_c33710	0.81	-1.5
3,534,738	+		PGA1_c33710	0.81	-1.7
3,534,738	+		PGA1_c33710	0.81	+0.4
3,534,738	+		PGA1_c33710	0.81	-1.6
3,534,738	+		PGA1_c33710	0.81	-0.3
3,534,738	+		PGA1_c33710	0.81	+0.7
3,534,738	+		PGA1_c33710	0.81	-2.3
3,534,738	+		PGA1_c33710	0.81	+1.5
3,534,738	+		PGA1_c33710	0.81	-2.6
3,534,746	-		PGA1_c33710	0.82	-0.8
3,534,746	-		PGA1_c33710	0.82	-0.4
3,534,746	-		PGA1_c33710	0.82	+0.1
3,534,746	-		PGA1_c33710	0.82	-0.8
3,534,791	+		PGA1_c33710	0.87	+0.7
3,534,802	+		PGA1_c33710	0.88	-0.6
3,534,810	-		PGA1_c33710	0.88	+0.4
3,534,826	+				+0.4
3,534,834	-				+1.0
3,534,861	-				-0.3
3,534,861	-				+0.1
3,534,861	-				-1.0
3,534,861	-				-0.3
3,534,861	-				+0.2
3,534,868	+				-1.8
3,534,868	+				+1.0
3,534,901	-				+1.5
3,534,911	-				+0.5
3,534,912	+				+1.2
3,535,000	+				+1.6
3,535,002	+				-0.0
3,535,002	+				+0.7
3,535,002	+				+1.4
3,535,051	+				+1.7
3,535,051	+				+0.4
3,535,051	+				-0.4
3,535,059	-				-0.5
3,535,059	-				-0.6
3,535,075	+				+0.6
3,535,084	-				+0.7
3,535,094	-				+1.3
3,535,094	-				-1.0
3,535,103	+				-0.3
3,535,111	-				-0.6
3,535,133	+				-2.6
3,535,133	+				-2.1
3,535,133	+				-1.1
3,535,133	+				-0.7
3,535,171	-		PGA1_c33720	0.12	+1.2
3,535,208	-		PGA1_c33720	0.16	-1.4
3,535,273	+		PGA1_c33720	0.22	-0.6
3,535,398	+		PGA1_c33720	0.35	-2.5
3,535,398	+		PGA1_c33720	0.35	-0.5
3,535,441	-		PGA1_c33720	0.39	-0.6
3,535,445	-		PGA1_c33720	0.39	+1.4
3,535,445	-		PGA1_c33720	0.39	+0.8
3,535,487	-		PGA1_c33720	0.43	-0.3
3,535,495	+		PGA1_c33720	0.44	+0.3
3,535,513	+		PGA1_c33720	0.46	-1.5
3,535,517	+		PGA1_c33720	0.46	+0.3
3,535,622	-		PGA1_c33720	0.57	+1.2
3,535,646	-		PGA1_c33720	0.59	+2.1
3,535,646	-		PGA1_c33720	0.59	-0.7
3,535,697	-		PGA1_c33720	0.64	-0.7
3,535,708	-		PGA1_c33720	0.65	+1.5
3,535,762	+		PGA1_c33720	0.70	+1.9
3,535,803	+		PGA1_c33720	0.74	-0.1
3,535,830	-		PGA1_c33720	0.77	+0.1
3,535,835	-		PGA1_c33720	0.78	+0.5
3,535,836	-		PGA1_c33720	0.78	+0.3
3,535,880	+		PGA1_c33720	0.82	+0.1
3,535,881	+		PGA1_c33720	0.82	+0.2
3,535,894	+		PGA1_c33720	0.83	+1.0
3,535,903	-		PGA1_c33720	0.84	-0.3
3,535,915	+		PGA1_c33720	0.86	-1.3