Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c32400

Experiment: Carbon source L-Ornithine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source L-Ornithine 5 mM
3,395,348	-				+0.2
3,395,353	-				+0.8
3,395,361	+				+2.1
3,395,384	+				+0.6
3,395,384	+				+0.8
3,395,392	-				+1.8
3,395,392	-				-0.4
3,395,392	-				-1.2
3,395,392	-				+1.0
3,395,392	-				-0.5
3,395,392	-				+1.9
3,395,392	-				-0.5
3,395,392	-				+0.5
3,395,392	-				+1.1
3,395,392	-				-0.4
3,395,392	-				-0.5
3,395,392	-				+0.2
3,395,421	-				+0.3
3,395,531	+				+0.5
3,395,642	-		PGA1_c32390	0.18	-0.0
3,395,644	+		PGA1_c32390	0.19	-0.4
3,395,644	+		PGA1_c32390	0.19	+0.9
3,395,644	+		PGA1_c32390	0.19	+1.1
3,395,647	-		PGA1_c32390	0.19	+0.2
3,395,747	-		PGA1_c32390	0.36	-0.6
3,395,772	+		PGA1_c32390	0.40	+0.5
3,395,807	+		PGA1_c32390	0.46	+0.1
3,395,843	+		PGA1_c32390	0.52	+0.3
3,395,876	-		PGA1_c32390	0.57	-0.5
3,395,884	-		PGA1_c32390	0.59	-0.0
3,395,921	-		PGA1_c32390	0.65	+0.5
3,395,921	-		PGA1_c32390	0.65	+1.4
3,396,077	+				-0.8
3,396,081	+				-0.4
3,396,091	+				+0.5
3,396,128	+				-0.3
3,396,149	+				+0.3
3,396,155	+				-0.4
3,396,163	-				+0.8
3,396,163	-				+1.2
3,396,163	-				+0.2
3,396,163	-				-0.4
3,396,163	-				+0.2
3,396,204	-				+0.4
3,396,250	+		PGA1_c32400	0.13	-0.6
3,396,270	+		PGA1_c32400	0.15	-2.3
3,396,333	-		PGA1_c32400	0.22	-0.8
3,396,333	-		PGA1_c32400	0.22	+0.8
3,396,333	-		PGA1_c32400	0.22	-1.8
3,396,345	+		PGA1_c32400	0.23	-0.7
3,396,415	+		PGA1_c32400	0.31	-2.4
3,396,415	+		PGA1_c32400	0.31	+0.6
3,396,438	-		PGA1_c32400	0.33	-0.4
3,396,439	+		PGA1_c32400	0.34	-1.0
3,396,447	-		PGA1_c32400	0.34	+0.5
3,396,516	+		PGA1_c32400	0.42	-0.3
3,396,521	+		PGA1_c32400	0.42	-0.2
3,396,521	+		PGA1_c32400	0.42	-1.4
3,396,534	+		PGA1_c32400	0.44	-1.1
3,396,534	-		PGA1_c32400	0.44	-0.5
3,396,542	-		PGA1_c32400	0.45	-1.4
3,396,601	+		PGA1_c32400	0.51	-1.0
3,396,609	-		PGA1_c32400	0.52	+0.3
3,396,618	+		PGA1_c32400	0.53	-2.4
3,396,625	-		PGA1_c32400	0.54	+0.6
3,396,626	-		PGA1_c32400	0.54	-0.7
3,396,644	-		PGA1_c32400	0.56	+1.8
3,396,670	+		PGA1_c32400	0.59	+0.3
3,396,735	+		PGA1_c32400	0.66	+0.5
3,396,764	-		PGA1_c32400	0.69	+1.1
3,396,764	-		PGA1_c32400	0.69	+0.1
3,396,779	+		PGA1_c32400	0.70	-1.1
3,396,779	+		PGA1_c32400	0.70	+0.1
3,396,779	+		PGA1_c32400	0.70	-0.9
3,396,779	+		PGA1_c32400	0.70	+0.1
3,396,779	+		PGA1_c32400	0.70	-0.1
3,396,782	-		PGA1_c32400	0.71	+1.6
3,396,786	+		PGA1_c32400	0.71	-0.4
3,396,787	-		PGA1_c32400	0.71	+0.2
3,396,787	-		PGA1_c32400	0.71	+0.8
3,396,787	-		PGA1_c32400	0.71	-0.5
3,396,787	-		PGA1_c32400	0.71	-1.5
3,396,787	-		PGA1_c32400	0.71	+0.6
3,396,787	-		PGA1_c32400	0.71	+1.2
3,396,787	-		PGA1_c32400	0.71	+0.5
3,396,801	+		PGA1_c32400	0.73	-0.1
3,396,823	+		PGA1_c32400	0.75	-2.1
3,396,823	+		PGA1_c32400	0.75	-0.2
3,396,823	+		PGA1_c32400	0.75	+1.4
3,396,823	+		PGA1_c32400	0.75	-1.6
3,396,823	+		PGA1_c32400	0.75	-2.0
3,396,832	-		PGA1_c32400	0.76	-0.7
3,396,878	-		PGA1_c32400	0.81	+0.4
3,396,878	-		PGA1_c32400	0.81	-0.7
3,396,883	-		PGA1_c32400	0.82	+1.3
3,396,925	+		PGA1_c32400	0.86	-1.6
3,396,968	+				-0.1
3,397,021	+				+0.9
3,397,026	+				+0.7
3,397,081	+				+0.3
3,397,081	+				-0.8
3,397,089	-				+0.2
3,397,089	-				+0.5
3,397,089	-				+0.8
3,397,089	-				+1.1
3,397,091	+				+2.3
3,397,103	+				+0.1
3,397,124	-				-0.9
3,397,138	+				-1.8
3,397,179	-				+0.5
3,397,183	+				+0.7
3,397,233	+				+1.0
3,397,233	+				-0.8
3,397,233	+				+0.5
3,397,233	+				-0.3
3,397,233	+				+0.3
3,397,241	-				+0.7
3,397,241	-				+0.7
3,397,241	-				-1.5
3,397,241	-				-0.3
3,397,245	+				-0.1
3,397,253	-				-0.5
3,397,260	+				-0.2
3,397,260	-				-0.3
3,397,261	-				-0.6
3,397,268	-				+0.1
3,397,309	-		PGA1_c32410	0.13	+0.8
3,397,344	-		PGA1_c32410	0.15	-0.8
3,397,364	-		PGA1_c32410	0.16	+0.4
3,397,400	-		PGA1_c32410	0.19	-0.7
3,397,400	-		PGA1_c32410	0.19	-1.4
3,397,400	-		PGA1_c32410	0.19	+0.7
3,397,483	-		PGA1_c32410	0.24	-1.7
3,397,496	-		PGA1_c32410	0.25	+0.2
3,397,543	+		PGA1_c32410	0.28	-0.1
3,397,569	+		PGA1_c32410	0.30	+0.5
3,397,605	-		PGA1_c32410	0.32	-1.6
3,397,620	-		PGA1_c32410	0.33	-2.2
3,397,712	-		PGA1_c32410	0.40	+1.0
3,397,760	+		PGA1_c32410	0.43	-1.1
3,397,779	+		PGA1_c32410	0.44	+0.1
3,397,779	+		PGA1_c32410	0.44	-2.0
3,397,825	+		PGA1_c32410	0.47	-0.3
3,397,833	-		PGA1_c32410	0.48	-0.5
3,397,844	+		PGA1_c32410	0.48	-2.3
3,397,849	+		PGA1_c32410	0.49	-0.5
3,397,857	-		PGA1_c32410	0.49	-0.3
3,397,872	+		PGA1_c32410	0.50	-2.3
3,397,946	+		PGA1_c32410	0.55	+1.6
3,397,969	-		PGA1_c32410	0.57	-0.9
3,397,979	-		PGA1_c32410	0.57	+1.4
3,398,019	-		PGA1_c32410	0.60	-1.1
3,398,021	-		PGA1_c32410	0.60	-1.2