Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c30650

Experiment: Carbon source L-Ornithine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source L-Ornithine 5 mM
3,199,065	-				-2.4
3,199,065	-				-2.0
3,199,065	-				-1.4
3,199,085	-				-1.2
3,199,110	+				+0.3
3,199,146	+				-0.5
3,199,146	+				-0.2
3,199,154	-				+0.2
3,199,154	-				+0.3
3,199,154	-				-0.4
3,199,154	-				+0.1
3,199,154	-				-0.6
3,199,154	-				-1.2
3,199,154	-				+1.3
3,199,165	+				+0.9
3,199,172	+				+0.1
3,199,180	+				+0.9
3,199,182	+				+0.8
3,199,188	-				+2.6
3,199,190	-				-0.7
3,199,199	+				+0.8
3,199,204	+				+0.4
3,199,204	+				-1.1
3,199,212	-				-1.2
3,199,226	+				+2.7
3,199,226	+				-0.5
3,199,242	-				-1.7
3,199,244	-				-0.6
3,199,250	+				-1.0
3,199,258	-				+1.1
3,199,258	-				+0.2
3,199,264	+				+0.0
3,199,264	+				+0.1
3,199,264	+				-0.2
3,199,269	+		PGA1_c30640	0.10	-0.0
3,199,269	+		PGA1_c30640	0.10	-0.5
3,199,269	+		PGA1_c30640	0.10	+0.4
3,199,277	-		PGA1_c30640	0.12	-1.2
3,199,277	-		PGA1_c30640	0.12	+1.6
3,199,298	-		PGA1_c30640	0.15	+1.1
3,199,310	-		PGA1_c30640	0.17	-0.2
3,199,314	+		PGA1_c30640	0.17	-1.1
3,199,322	+		PGA1_c30640	0.19	-1.2
3,199,322	+		PGA1_c30640	0.19	+0.5
3,199,322	+		PGA1_c30640	0.19	+0.3
3,199,330	-		PGA1_c30640	0.20	-1.6
3,199,330	-		PGA1_c30640	0.20	-0.3
3,199,330	-		PGA1_c30640	0.20	+1.1
3,199,398	+		PGA1_c30640	0.30	+0.6
3,199,425	+		PGA1_c30640	0.35	-0.1
3,199,430	+		PGA1_c30640	0.35	-0.3
3,199,433	-		PGA1_c30640	0.36	-0.9
3,199,438	-		PGA1_c30640	0.37	-0.5
3,199,438	-		PGA1_c30640	0.37	-0.9
3,199,480	-		PGA1_c30640	0.43	+0.2
3,199,499	+		PGA1_c30640	0.46	-0.5
3,199,503	+		PGA1_c30640	0.47	+0.6
3,199,507	+		PGA1_c30640	0.47	+1.8
3,199,567	-		PGA1_c30640	0.56	+0.5
3,199,568	+		PGA1_c30640	0.57	+1.2
3,199,580	+		PGA1_c30640	0.58	+0.5
3,199,585	+		PGA1_c30640	0.59	-1.5
3,199,601	+		PGA1_c30640	0.62	+1.5
3,199,601	+		PGA1_c30640	0.62	+0.8
3,199,601	+		PGA1_c30640	0.62	+0.3
3,199,618	+		PGA1_c30640	0.64	+0.7
3,199,620	+		PGA1_c30640	0.65	-1.8
3,199,624	+		PGA1_c30640	0.65	+1.0
3,199,624	+		PGA1_c30640	0.65	+2.1
3,199,624	+		PGA1_c30640	0.65	-0.2
3,199,624	+		PGA1_c30640	0.65	+1.8
3,199,632	-		PGA1_c30640	0.67	+0.4
3,199,632	-		PGA1_c30640	0.67	-0.5
3,199,632	-		PGA1_c30640	0.67	+0.2
3,199,633	+		PGA1_c30640	0.67	-1.9
3,199,634	-		PGA1_c30640	0.67	-0.2
3,199,649	-		PGA1_c30640	0.69	-1.3
3,199,661	+		PGA1_c30640	0.71	+0.5
3,199,676	+		PGA1_c30640	0.73	+1.5
3,199,682	-		PGA1_c30640	0.74	-0.3
3,199,684	+		PGA1_c30640	0.75	+0.2
3,199,684	+		PGA1_c30640	0.75	+1.4
3,199,684	+		PGA1_c30640	0.75	-0.7
3,199,684	+		PGA1_c30640	0.75	-0.5
3,199,684	+		PGA1_c30640	0.75	-0.2
3,199,684	+		PGA1_c30640	0.75	-0.3
3,199,684	+		PGA1_c30640	0.75	-0.1
3,199,684	-		PGA1_c30640	0.75	-1.1
3,199,686	+		PGA1_c30640	0.75	-0.1
3,199,686	+		PGA1_c30640	0.75	+1.8
3,199,686	+		PGA1_c30640	0.75	-0.6
3,199,686	+		PGA1_c30640	0.75	+0.7
3,199,686	+		PGA1_c30640	0.75	-0.4
3,199,686	+		PGA1_c30640	0.75	-1.0
3,199,686	+		PGA1_c30640	0.75	+0.2
3,199,686	+		PGA1_c30640	0.75	+0.4
3,199,686	+		PGA1_c30640	0.75	-2.8
3,199,692	-		PGA1_c30640	0.76	-2.5
3,199,692	-		PGA1_c30640	0.76	-0.7
3,199,692	-		PGA1_c30640	0.76	-0.1
3,199,693	-		PGA1_c30640	0.76	-2.1
3,199,694	-		PGA1_c30640	0.76	-0.0
3,199,694	-		PGA1_c30640	0.76	+1.0
3,199,694	-		PGA1_c30640	0.76	+0.9
3,199,694	-		PGA1_c30640	0.76	+0.4
3,199,694	-		PGA1_c30640	0.76	+1.5
3,199,694	-		PGA1_c30640	0.76	+0.1
3,199,694	-		PGA1_c30640	0.76	-0.5
3,199,720	+		PGA1_c30640	0.80	-1.9
3,199,730	-		PGA1_c30640	0.82	+0.0
3,199,756	+		PGA1_c30640	0.86	-1.2
3,199,757	-		PGA1_c30640	0.86	-1.3
3,199,757	-		PGA1_c30640	0.86	-0.2
3,199,760	-		PGA1_c30640	0.86	+1.1
3,199,760	-		PGA1_c30640	0.86	-0.2
3,199,762	-		PGA1_c30640	0.87	-1.4
3,199,781	+		PGA1_c30640	0.90	+0.3
3,199,782	+		PGA1_c30640	0.90	-1.1
3,199,790	-				+2.1
3,199,790	-				+0.9
3,199,790	-				-0.8
3,199,790	-				-2.2
3,199,790	-				+0.5
3,199,800	-				-0.9
3,199,800	-				-1.5
3,199,805	-				-0.2
3,199,819	+				+0.5
3,199,824	+				+0.8
3,199,824	+				-1.4
3,199,824	+				+0.9
3,199,824	+				+0.7
3,199,824	+				+0.0
3,199,824	+				+0.1
3,199,824	+				+0.6
3,199,824	+				-1.1
3,199,824	+				-0.7
3,199,824	+				-0.0
3,199,824	+				-1.7
3,199,824	+				-0.5
3,199,824	+				-0.3
3,199,824	+				-1.6
3,199,824	+				-0.0
3,199,824	+				+1.2
3,199,824	+				-0.9
3,199,824	+				+1.3
3,199,824	+				-0.5
3,199,824	+				-0.1
3,199,824	+				+1.3
3,199,824	+				+2.2
3,199,824	+				-0.1
3,199,824	+				-2.2
3,199,824	+				-1.2
3,199,824	+				+0.6
3,199,824	+				+0.0
3,199,824	+				-0.2
3,199,824	+				+0.5
3,199,824	+				-0.7
3,199,824	+				+1.5
3,199,824	+				-1.3
3,199,824	+				-0.2
3,199,824	+				-1.0
3,199,824	+				-0.9
3,199,824	+				+0.9
3,199,832	-				+0.5
3,199,832	-				-0.2
3,199,832	-				+0.4
3,199,832	-				+0.9
3,199,832	-				-1.0
3,199,832	-				-0.5
3,199,832	-				-1.1
3,199,832	-				-1.4
3,199,832	-				+0.3
3,199,832	-				-2.2
3,199,832	-				-1.2
3,199,832	-				-0.2
3,199,832	-				-0.2
3,199,832	-				-1.2
3,199,832	-				+1.1
3,199,832	-				+0.0
3,199,832	-				-0.5
3,199,832	-				-1.4
3,199,832	-				-2.1
3,199,832	-				+0.1
3,199,832	-				-0.2
3,199,832	-				+0.8
3,199,832	-				+0.4
3,199,832	-				+0.6
3,199,832	-				+0.5
3,199,832	-				+1.1
3,199,832	-				-0.1
3,199,832	-				-0.2
3,199,832	-				-0.2
3,199,832	-				-3.2
3,199,832	-				-0.5
3,199,832	-				+1.2
3,199,833	+				-1.1
3,199,834	-				+0.7
3,199,841	+				-0.2
3,199,849	-				+1.1
3,199,849	-				+1.9
3,199,849	-				-0.1
3,199,849	-				-3.1
3,199,849	-				+0.2
3,199,849	-				-0.6
3,199,868	+				+0.9
3,199,868	+				+2.1
3,199,876	-				+0.1
3,199,876	-				-0.3
3,199,893	-				+1.7
3,199,914	+				-0.2
3,199,933	+				-1.6
3,199,969	+				-1.2
3,199,982	+				-1.5
3,199,985	-				+0.6
3,199,991	-				+0.5
3,200,100	-				+0.8
3,200,127	-				+2.5
3,200,162	+				+0.1
3,200,164	+				+1.5
3,200,164	-				+1.5
3,200,170	-				-0.1
3,200,170	-				+2.6
3,200,180	+				+1.5
3,200,195	+				-1.1
3,200,195	+				-0.2
3,200,195	+				+1.2
3,200,195	+				-2.4
3,200,195	+				-0.2
3,200,195	+				+1.3
3,200,195	+				+0.4
3,200,195	+				-0.6
3,200,195	+				-2.1
3,200,203	-		PGA1_c30650	0.11	+0.2
3,200,203	-		PGA1_c30650	0.11	+2.1
3,200,212	+		PGA1_c30650	0.11	-2.4
3,200,212	+		PGA1_c30650	0.11	-0.6
3,200,246	+		PGA1_c30650	0.14	+0.8
3,200,248	+		PGA1_c30650	0.14	-1.2
3,200,249	-		PGA1_c30650	0.14	-0.0
3,200,251	-		PGA1_c30650	0.14	+2.7
3,200,253	+		PGA1_c30650	0.14	-0.7
3,200,253	+		PGA1_c30650	0.14	-0.6
3,200,253	+		PGA1_c30650	0.14	-0.7
3,200,253	+		PGA1_c30650	0.14	-1.9
3,200,253	+		PGA1_c30650	0.14	-1.1
3,200,253	+		PGA1_c30650	0.14	+0.5
3,200,256	-		PGA1_c30650	0.15	+0.8
3,200,261	-		PGA1_c30650	0.15	-1.1
3,200,263	+		PGA1_c30650	0.15	-0.4
3,200,271	-		PGA1_c30650	0.16	-0.2
3,200,271	-		PGA1_c30650	0.16	-1.5
3,200,271	-		PGA1_c30650	0.16	+0.9
3,200,274	+		PGA1_c30650	0.16	-1.3
3,200,296	+		PGA1_c30650	0.18	+0.3
3,200,299	-		PGA1_c30650	0.18	+1.3
3,200,313	-		PGA1_c30650	0.19	+0.1
3,200,332	-		PGA1_c30650	0.20	-0.3
3,200,334	+		PGA1_c30650	0.20	-0.6
3,200,342	-		PGA1_c30650	0.21	-0.7
3,200,342	-		PGA1_c30650	0.21	-1.9
3,200,343	-		PGA1_c30650	0.21	-0.3
3,200,400	+		PGA1_c30650	0.25	+3.9
3,200,400	+		PGA1_c30650	0.25	-2.3
3,200,405	+		PGA1_c30650	0.26	-0.5
3,200,405	+		PGA1_c30650	0.26	-2.1
3,200,408	-		PGA1_c30650	0.26	-0.1
3,200,411	+		PGA1_c30650	0.26	+0.1
3,200,413	-		PGA1_c30650	0.26	-1.4
3,200,413	-		PGA1_c30650	0.26	+0.1
3,200,413	-		PGA1_c30650	0.26	-0.2
3,200,431	+		PGA1_c30650	0.28	+0.3
3,200,456	+		PGA1_c30650	0.30	-0.8
3,200,464	-		PGA1_c30650	0.30	+0.6
3,200,464	-		PGA1_c30650	0.30	+1.3
3,200,482	+		PGA1_c30650	0.32	-1.1
3,200,482	+		PGA1_c30650	0.32	-0.9
3,200,482	+		PGA1_c30650	0.32	-0.4
3,200,489	+		PGA1_c30650	0.32	+0.6
3,200,489	+		PGA1_c30650	0.32	+0.2
3,200,505	+		PGA1_c30650	0.33	+0.2
3,200,505	+		PGA1_c30650	0.33	-1.1
3,200,541	-		PGA1_c30650	0.36	+0.6
3,200,545	+		PGA1_c30650	0.36	-0.6
3,200,545	+		PGA1_c30650	0.36	-1.4
3,200,564	+		PGA1_c30650	0.38	+0.5
3,200,626	+		PGA1_c30650	0.42	+0.5
3,200,626	+		PGA1_c30650	0.42	+0.3
3,200,626	+		PGA1_c30650	0.42	-1.2
3,200,626	+		PGA1_c30650	0.42	+1.0
3,200,634	-		PGA1_c30650	0.43	+2.1
3,200,634	-		PGA1_c30650	0.43	-2.2
3,200,634	-		PGA1_c30650	0.43	-0.1
3,200,634	-		PGA1_c30650	0.43	-1.4
3,200,655	+		PGA1_c30650	0.45	-0.2
3,200,655	+		PGA1_c30650	0.45	+0.4
3,200,678	-		PGA1_c30650	0.46	-0.4
3,200,681	+		PGA1_c30650	0.46	+0.9
3,200,681	+		PGA1_c30650	0.46	+1.6
3,200,681	+		PGA1_c30650	0.46	+0.2
3,200,681	+		PGA1_c30650	0.46	+1.4
3,200,681	+		PGA1_c30650	0.46	-1.4
3,200,689	-		PGA1_c30650	0.47	+0.4
3,200,692	+		PGA1_c30650	0.47	+0.5
3,200,728	-		PGA1_c30650	0.50	-0.1
3,200,801	+		PGA1_c30650	0.55	-0.4
3,200,808	+		PGA1_c30650	0.56	-0.5
3,200,809	-		PGA1_c30650	0.56	-0.7
3,200,817	-		PGA1_c30650	0.57	+0.8
3,200,832	+		PGA1_c30650	0.58	-2.6
3,200,837	+		PGA1_c30650	0.58	-1.0
3,200,863	-		PGA1_c30650	0.60	-0.4
3,200,870	-		PGA1_c30650	0.61	-1.0
3,200,870	-		PGA1_c30650	0.61	+2.0
3,200,870	-		PGA1_c30650	0.61	-0.1
3,200,875	-		PGA1_c30650	0.61	+0.5
3,200,886	-		PGA1_c30650	0.62	-1.5
3,200,886	-		PGA1_c30650	0.62	+0.9
3,200,890	+		PGA1_c30650	0.62	-0.3
3,200,891	+		PGA1_c30650	0.62	+0.6
3,200,891	+		PGA1_c30650	0.62	-2.5
3,200,932	+		PGA1_c30650	0.65	-1.8
3,200,940	-		PGA1_c30650	0.66	+0.3
3,200,945	+		PGA1_c30650	0.66	+0.3
3,200,981	-		PGA1_c30650	0.69	-0.2
3,200,992	+		PGA1_c30650	0.70	-0.8
3,201,043	+		PGA1_c30650	0.74	-0.7
3,201,076	-		PGA1_c30650	0.76	+0.3
3,201,086	-		PGA1_c30650	0.77	-1.3
3,201,115	-		PGA1_c30650	0.79	-2.2
3,201,138	+		PGA1_c30650	0.81	+0.3
3,201,192	-		PGA1_c30650	0.85	-0.5
3,201,218	+		PGA1_c30650	0.87	-0.1
3,201,244	+		PGA1_c30650	0.89	+0.4
3,201,244	+		PGA1_c30650	0.89	-1.1
3,201,247	-		PGA1_c30650	0.89	-0.7
3,201,252	-		PGA1_c30650	0.89	-0.1
3,201,252	-		PGA1_c30650	0.89	+1.5
3,201,252	-		PGA1_c30650	0.89	-0.8
3,201,252	-		PGA1_c30650	0.89	-0.6
3,201,264	-				+2.0
3,201,274	+				-0.7
3,201,274	+				+0.1
3,201,274	+				+1.3
3,201,274	+				+0.6
3,201,274	+				+1.0
3,201,282	-				+0.7
3,201,298	+				-0.6
3,201,298	+				-1.1
3,201,298	+				+0.2
3,201,306	-				-0.1
3,201,315	+				+0.1
3,201,356	+				+0.2
3,201,356	+				+0.9
3,201,356	+				-1.2
3,201,364	-				-2.1
3,201,391	+				-0.2
3,201,391	+				-1.6
3,201,473	-		PGA1_c30660	0.25	+1.1
3,201,473	-		PGA1_c30660	0.25	-0.9
3,201,473	-		PGA1_c30660	0.25	+0.1
3,201,478	+		PGA1_c30660	0.27	-1.1
3,201,493	-		PGA1_c30660	0.33	+2.4
3,201,532	-		PGA1_c30660	0.47	+0.8
3,201,544	-		PGA1_c30660	0.51	-0.4
3,201,578	+		PGA1_c30660	0.63	+0.3
3,201,605	+		PGA1_c30660	0.73	+0.2
3,201,623	+		PGA1_c30660	0.80	+0.4
3,201,631	-		PGA1_c30660	0.83	+0.2
3,201,652	+				-1.2
3,201,662	-				+1.6
3,201,684	-				-0.8
3,201,723	+				+1.2
3,201,764	+		PGA1_c30670	0.12	-0.2
3,201,764	+		PGA1_c30670	0.12	+1.5
3,201,772	-		PGA1_c30670	0.13	-0.5
3,201,772	-		PGA1_c30670	0.13	+1.2
3,201,772	-		PGA1_c30670	0.13	+0.3
3,201,772	-		PGA1_c30670	0.13	+1.4
3,201,808	-		PGA1_c30670	0.20	-0.5
3,201,858	-		PGA1_c30670	0.28	+0.6
3,201,886	+		PGA1_c30670	0.33	+0.8
3,201,887	+		PGA1_c30670	0.33	+0.1
3,201,888	+		PGA1_c30670	0.33	+0.3
3,202,006	-		PGA1_c30670	0.53	-0.9
3,202,055	+		PGA1_c30670	0.62	-0.1
3,202,056	-		PGA1_c30670	0.62	+0.6