Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c00030

Experiment: Carbon source L-Ornithine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source L-Ornithine 5 mM
2,953	+				-0.1
2,953	+				+1.1
2,953	+				+0.1
2,961	-				-0.6
2,963	+				+0.9
2,969	+				-0.2
2,990	+				+1.2
2,990	+				-0.8
2,998	-				-0.2
2,998	-				+0.4
3,053	+				-2.1
3,070	-				+0.1
3,073	+				+0.1
3,073	+				-2.8
3,093	+				-1.1
3,131	+				+1.5
3,248	+		PGA1_c00030	0.17	-1.5
3,281	+		PGA1_c00030	0.20	+0.5
3,289	+		PGA1_c00030	0.21	+1.4
3,317	-		PGA1_c00030	0.24	-0.2
3,342	-		PGA1_c00030	0.26	+0.9
3,386	-		PGA1_c00030	0.30	-0.7
3,510	+		PGA1_c00030	0.41	+0.4
3,584	-		PGA1_c00030	0.48	-0.9
3,640	+		PGA1_c00030	0.53	-1.6
3,674	-		PGA1_c00030	0.56	-0.2
3,707	-		PGA1_c00030	0.59	-1.3
3,732	+		PGA1_c00030	0.61	-0.3
3,750	-		PGA1_c00030	0.63	+0.8
3,763	+		PGA1_c00030	0.64	-2.4
3,799	+		PGA1_c00030	0.68	-1.1
3,807	-		PGA1_c00030	0.68	+1.9
3,807	-		PGA1_c00030	0.68	+0.2
3,831	-		PGA1_c00030	0.70	+0.5
3,848	+		PGA1_c00030	0.72	+0.4
3,848	+		PGA1_c00030	0.72	+1.1
3,897	+		PGA1_c00030	0.77	+2.7
4,009	-		PGA1_c00030	0.87	+2.1
4,035	-		PGA1_c00030	0.89	+0.4
4,046	+				-1.7
4,066	+				-0.7
4,066	+				+1.4
4,066	+				+1.7
4,066	+				-0.9
4,074	-				+0.3
4,074	-				-0.9
4,074	-				+0.3
4,098	+				+0.3
4,103	+				+0.2
4,111	+				-1.0
4,114	-				+0.6
4,132	+				-0.1
4,195	-				-0.2
4,212	-				+0.3
4,235	-		PGA1_c00040	0.14	-0.7
4,290	-		PGA1_c00040	0.22	-0.7
4,369	+		PGA1_c00040	0.35	-0.1
4,402	-		PGA1_c00040	0.40	+0.5
4,480	+		PGA1_c00040	0.53	-0.2
4,522	-		PGA1_c00040	0.60	+0.2
4,580	+		PGA1_c00040	0.69	-0.3
4,580	+		PGA1_c00040	0.69	-1.3
4,581	-		PGA1_c00040	0.69	-0.2
4,656	-		PGA1_c00040	0.81	-0.2
4,656	-		PGA1_c00040	0.81	-0.2
4,666	-		PGA1_c00040	0.83	+1.2
4,671	-		PGA1_c00040	0.84	-0.2
4,777	+				-1.5
4,780	-				-0.5
4,780	-				+0.3
4,785	+				+0.8
4,825	+				+2.1
4,858	+		PGA1_c00050	0.12	-0.2
4,873	+		PGA1_c00050	0.14	+1.1
4,913	+		PGA1_c00050	0.21	+2.1
4,921	-		PGA1_c00050	0.23	+0.1
4,921	-		PGA1_c00050	0.23	+0.1
4,950	+		PGA1_c00050	0.27	+0.5
4,971	+		PGA1_c00050	0.31	+1.4
4,979	-		PGA1_c00050	0.32	+1.1
5,031	-		PGA1_c00050	0.41	+0.5
5,057	-		PGA1_c00050	0.45	-1.2
5,068	-		PGA1_c00050	0.47	+0.5
5,103	+		PGA1_c00050	0.53	+1.1
5,148	-		PGA1_c00050	0.60	+0.1
5,152	+		PGA1_c00050	0.61	+0.5