Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c30080

Experiment: Carbon source L-Ornithine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source L-Ornithine 5 mM
3,144,365	+		PGA1_c30070	0.68	-2.2
3,144,373	-		PGA1_c30070	0.69	+0.2
3,144,373	-		PGA1_c30070	0.69	+0.2
3,144,386	+		PGA1_c30070	0.69	-0.6
3,144,386	+		PGA1_c30070	0.69	+0.8
3,144,394	-		PGA1_c30070	0.70	-1.9
3,144,394	-		PGA1_c30070	0.70	-1.2
3,144,394	-		PGA1_c30070	0.70	-2.1
3,144,394	-		PGA1_c30070	0.70	+0.6
3,144,412	+		PGA1_c30070	0.71	-0.2
3,144,420	-		PGA1_c30070	0.72	-0.9
3,144,433	+		PGA1_c30070	0.72	-0.4
3,144,434	+		PGA1_c30070	0.72	+0.7
3,144,442	-		PGA1_c30070	0.73	+1.0
3,144,442	-		PGA1_c30070	0.73	+0.1
3,144,561	-		PGA1_c30070	0.80	-0.3
3,144,575	+		PGA1_c30070	0.81	-0.9
3,144,583	-		PGA1_c30070	0.82	+0.1
3,144,583	-		PGA1_c30070	0.82	+0.9
3,144,583	-		PGA1_c30070	0.82	-0.8
3,144,650	-		PGA1_c30070	0.86	+0.6
3,144,791	+				-1.4
3,144,948	+				+0.3
3,144,954	-				+0.2
3,145,016	+				-0.8
3,145,019	-				+0.6
3,145,024	-				+1.5
3,145,031	+				+0.4
3,145,041	+				-1.0
3,145,059	+				-0.3
3,145,066	+				+1.0
3,145,153	+				+1.1
3,145,165	+				-0.2
3,145,175	+				+1.6
3,145,230	+				-0.0
3,145,230	+				-2.1
3,145,232	-				-0.3
3,145,257	+				-0.7
3,145,257	+				+1.2
3,145,338	+				-0.5
3,145,351	-				-0.6
3,145,351	-				-0.9
3,145,421	-		PGA1_c30080	0.19	-1.2
3,145,421	-		PGA1_c30080	0.19	-0.1
3,145,457	+		PGA1_c30080	0.24	+0.0
3,145,465	-		PGA1_c30080	0.25	-0.3
3,145,505	+		PGA1_c30080	0.30	-1.2
3,145,505	+		PGA1_c30080	0.30	+0.4
3,145,513	-		PGA1_c30080	0.31	+0.4
3,145,615	+		PGA1_c30080	0.44	+0.1
3,145,615	+		PGA1_c30080	0.44	-1.1
3,145,633	+		PGA1_c30080	0.46	-0.4
3,145,634	+		PGA1_c30080	0.46	+0.0
3,145,642	-		PGA1_c30080	0.47	-2.1
3,145,651	-		PGA1_c30080	0.49	+0.3
3,145,651	-		PGA1_c30080	0.49	+0.5
3,145,651	-		PGA1_c30080	0.49	-0.6
3,145,714	+		PGA1_c30080	0.57	+1.0
3,145,714	+		PGA1_c30080	0.57	+0.7
3,145,733	+		PGA1_c30080	0.59	-1.7
3,145,733	+		PGA1_c30080	0.59	-0.3
3,145,762	-		PGA1_c30080	0.63	+0.2
3,145,815	-		PGA1_c30080	0.70	+0.1
3,145,838	+		PGA1_c30080	0.73	+0.2
3,145,838	+		PGA1_c30080	0.73	-0.1
3,145,838	+		PGA1_c30080	0.73	+1.4
3,145,846	-		PGA1_c30080	0.74	-0.3
3,145,846	-		PGA1_c30080	0.74	-1.2
3,145,866	+		PGA1_c30080	0.76	-0.3
3,145,866	+		PGA1_c30080	0.76	-0.9
3,145,874	-		PGA1_c30080	0.77	+0.8
3,145,874	-		PGA1_c30080	0.77	+0.1
3,145,920	+		PGA1_c30080	0.83	-2.2
3,145,920	+		PGA1_c30080	0.83	-0.7
3,145,920	+		PGA1_c30080	0.83	+0.2
3,145,920	+		PGA1_c30080	0.83	+0.4
3,145,920	+		PGA1_c30080	0.83	-1.8
3,145,920	+		PGA1_c30080	0.83	+1.4
3,145,928	-		PGA1_c30080	0.84	-1.7
3,145,928	-		PGA1_c30080	0.84	-0.1
3,145,928	-		PGA1_c30080	0.84	+0.7
3,145,928	-		PGA1_c30080	0.84	+0.0
3,145,938	-		PGA1_c30080	0.86	-0.3
3,145,941	+		PGA1_c30080	0.86	-0.8
3,145,985	-				-1.7
3,145,985	-				-1.0
3,145,985	-				-0.7
3,146,018	+				-2.1
3,146,152	+				+0.2
3,146,152	+				-0.7
3,146,160	-				-0.2
3,146,160	-				+0.6
3,146,160	-				-0.5
3,146,160	-				+2.2
3,146,160	-				-0.5
3,146,160	-				+0.3
3,146,167	+				+0.6
3,146,198	+				+1.5
3,146,198	+				-0.3
3,146,198	+				+1.2
3,146,198	+				-0.5
3,146,198	+				-2.3
3,146,198	+				-0.1
3,146,198	+				+1.1
3,146,198	+				+0.2
3,146,198	+				-1.7
3,146,198	+				+0.7
3,146,206	-				+0.7
3,146,206	-				+2.2
3,146,206	-				-0.1
3,146,206	-				-1.0
3,146,206	-				+0.3
3,146,206	-				-0.6
3,146,206	-				-0.6
3,146,206	-				-1.7
3,146,206	-				-2.0
3,146,206	-				-1.9
3,146,206	-				-0.6
3,146,206	-				+0.9
3,146,206	-				-1.6
3,146,206	-				+1.1
3,146,206	-				-0.3
3,146,216	-				-1.2
3,146,246	+				-1.2
3,146,246	+				-2.4
3,146,246	+				+0.8
3,146,246	+				-0.9
3,146,254	-				+0.5
3,146,254	-				+0.2
3,146,254	-				-0.5
3,146,264	-				+1.5
3,146,284	-				-1.2
3,146,337	+		PGA1_c30090	0.16	-2.0
3,146,495	+		PGA1_c30090	0.34	+1.4
3,146,539	+		PGA1_c30090	0.39	-1.8
3,146,548	-		PGA1_c30090	0.40	-1.3
3,146,554	+		PGA1_c30090	0.41	+0.3
3,146,554	+		PGA1_c30090	0.41	+0.3
3,146,554	+		PGA1_c30090	0.41	+0.1
3,146,554	+		PGA1_c30090	0.41	+0.3
3,146,562	-		PGA1_c30090	0.41	-0.3
3,146,562	-		PGA1_c30090	0.41	-2.2
3,146,562	-		PGA1_c30090	0.41	+0.5
3,146,595	+		PGA1_c30090	0.45	+1.1
3,146,634	+		PGA1_c30090	0.50	-0.7
3,146,667	-		PGA1_c30090	0.54	-0.5
3,146,667	-		PGA1_c30090	0.54	+0.8
3,146,694	+		PGA1_c30090	0.57	+0.5
3,146,696	+		PGA1_c30090	0.57	+0.1
3,146,704	+		PGA1_c30090	0.58	-0.7
3,146,715	+		PGA1_c30090	0.59	+0.7
3,146,715	+		PGA1_c30090	0.59	-0.6
3,146,715	+		PGA1_c30090	0.59	+1.2
3,146,715	+		PGA1_c30090	0.59	-0.2
3,146,715	+		PGA1_c30090	0.59	+1.4
3,146,725	+		PGA1_c30090	0.60	-0.1
3,146,733	-		PGA1_c30090	0.61	-1.8
3,146,794	+		PGA1_c30090	0.68	+0.9
3,146,802	-		PGA1_c30090	0.69	-1.4
3,146,804	+		PGA1_c30090	0.69	+0.2
3,146,852	+		PGA1_c30090	0.75	+0.2
3,146,964	+		PGA1_c30090	0.88	+1.1
3,146,972	-		PGA1_c30090	0.89	-1.8
3,147,010	+				+0.4
3,147,010	+				-0.4
3,147,025	-				-0.9