Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c22930

Experiment: Carbon source L-Ornithine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source L-Ornithine 5 mM
2,374,435	-				+0.5
2,374,556	-		PGA1_c22920	0.15	+0.6
2,374,619	-		PGA1_c22920	0.21	-0.1
2,374,620	-		PGA1_c22920	0.22	+0.1
2,374,625	-		PGA1_c22920	0.22	+1.5
2,374,765	-		PGA1_c22920	0.36	+1.7
2,374,766	-		PGA1_c22920	0.36	-2.1
2,374,891	+		PGA1_c22920	0.49	+1.1
2,374,930	-		PGA1_c22920	0.53	-1.1
2,375,018	-		PGA1_c22920	0.62	-1.2
2,375,018	-		PGA1_c22920	0.62	+0.8
2,375,057	+		PGA1_c22920	0.65	+1.2
2,375,065	-		PGA1_c22920	0.66	+0.3
2,375,075	+		PGA1_c22920	0.67	+2.0
2,375,075	+		PGA1_c22920	0.67	+0.7
2,375,075	+		PGA1_c22920	0.67	-1.1
2,375,075	+		PGA1_c22920	0.67	-0.4
2,375,083	-		PGA1_c22920	0.68	-0.3
2,375,083	-		PGA1_c22920	0.68	+0.8
2,375,083	-		PGA1_c22920	0.68	-0.5
2,375,083	-		PGA1_c22920	0.68	-1.6
2,375,096	-				+3.1
2,375,142	-		PGA1_c22920	0.74	+1.1
2,375,151	-		PGA1_c22920	0.75	+1.1
2,375,264	+		PGA1_c22920	0.86	-0.1
2,375,307	+				-0.3
2,375,307	+				+0.5
2,375,315	-				+0.2
2,375,315	-				-0.0
2,375,383	-				+0.8
2,375,406	+				+0.2
2,375,406	+				+1.3
2,375,414	-		PGA1_c22930	0.12	+0.2
2,375,416	+		PGA1_c22930	0.13	+0.3
2,375,416	+		PGA1_c22930	0.13	-1.1
2,375,416	+		PGA1_c22930	0.13	-0.0
2,375,416	+		PGA1_c22930	0.13	-0.4
2,375,416	+		PGA1_c22930	0.13	+0.1
2,375,416	+		PGA1_c22930	0.13	-0.6
2,375,424	-		PGA1_c22930	0.18	-0.2
2,375,424	-		PGA1_c22930	0.18	-0.8
2,375,424	-		PGA1_c22930	0.18	-0.9
2,375,424	-		PGA1_c22930	0.18	-0.6
2,375,424	-		PGA1_c22930	0.18	+0.4
2,375,424	-		PGA1_c22930	0.18	+1.3
2,375,454	-		PGA1_c22930	0.34	-2.1
2,375,459	-		PGA1_c22930	0.37	-0.4
2,375,486	+		PGA1_c22930	0.53	-1.1
2,375,491	+		PGA1_c22930	0.55	+0.5
2,375,494	-		PGA1_c22930	0.57	-0.1
2,375,652	-				+1.5
2,375,652	-				+0.8
2,375,652	-				+1.5
2,375,652	-				+0.8
2,375,661	-				+0.7
2,375,684	-				+1.5
2,375,770	+		PGA1_c22940	0.18	-0.8
2,375,832	-		PGA1_c22940	0.24	+0.4
2,375,837	-		PGA1_c22940	0.25	-1.8
2,375,903	-		PGA1_c22940	0.31	-0.1
2,375,935	+		PGA1_c22940	0.35	-0.7
2,375,939	+		PGA1_c22940	0.35	-0.2
2,375,978	-		PGA1_c22940	0.39	+1.8
2,376,003	+		PGA1_c22940	0.41	-0.3
2,376,010	+		PGA1_c22940	0.42	+0.1
2,376,018	-		PGA1_c22940	0.43	+2.9
2,376,018	-		PGA1_c22940	0.43	+0.9
2,376,018	-		PGA1_c22940	0.43	-0.5
2,376,018	-		PGA1_c22940	0.43	-0.3
2,376,018	-		PGA1_c22940	0.43	+0.2
2,376,058	+		PGA1_c22940	0.47	+2.2
2,376,070	+		PGA1_c22940	0.48	-0.2
2,376,070	+		PGA1_c22940	0.48	-0.9
2,376,070	+		PGA1_c22940	0.48	+0.1
2,376,070	+		PGA1_c22940	0.48	-1.2
2,376,070	+		PGA1_c22940	0.48	-0.0
2,376,078	-		PGA1_c22940	0.49	-0.1
2,376,078	-		PGA1_c22940	0.49	-1.5
2,376,078	-		PGA1_c22940	0.49	+0.8
2,376,110	+		PGA1_c22940	0.52	-3.2
2,376,110	+		PGA1_c22940	0.52	+2.1
2,376,157	+		PGA1_c22940	0.57	-1.8
2,376,157	+		PGA1_c22940	0.57	-0.5
2,376,177	+		PGA1_c22940	0.59	-1.0
2,376,189	+		PGA1_c22940	0.60	-0.3
2,376,199	-		PGA1_c22940	0.61	-1.9
2,376,241	+		PGA1_c22940	0.65	-0.2
2,376,243	-		PGA1_c22940	0.65	+1.8
2,376,304	+		PGA1_c22940	0.71	-0.1
2,376,447	-		PGA1_c22940	0.86	+0.5
2,376,449	+		PGA1_c22940	0.86	-1.5
2,376,466	-		PGA1_c22940	0.88	-1.5
2,376,477	+		PGA1_c22940	0.89	+1.5
2,376,477	+		PGA1_c22940	0.89	+0.5
2,376,541	-				+0.5
2,376,550	+				+0.9
2,376,558	-				-2.6
2,376,558	-				-0.2
2,376,558	-				+1.3