Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c22770

Experiment: Carbon source L-Ornithine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source L-Ornithine 5 mM
2,360,328	-		PGA1_c22760	0.54	+1.8
2,360,340	+		PGA1_c22760	0.54	-0.2
2,360,340	+		PGA1_c22760	0.54	-1.9
2,360,343	-		PGA1_c22760	0.55	+0.3
2,360,349	-		PGA1_c22760	0.55	-1.7
2,360,359	-		PGA1_c22760	0.56	+0.1
2,360,393	-		PGA1_c22760	0.58	-0.6
2,360,477	+		PGA1_c22760	0.63	+0.4
2,360,477	+		PGA1_c22760	0.63	+3.1
2,360,477	+		PGA1_c22760	0.63	+0.9
2,360,477	+		PGA1_c22760	0.63	+0.7
2,360,477	+		PGA1_c22760	0.63	+0.1
2,360,477	+		PGA1_c22760	0.63	-0.7
2,360,477	+		PGA1_c22760	0.63	+1.0
2,360,485	-		PGA1_c22760	0.63	-2.4
2,360,485	-		PGA1_c22760	0.63	+1.9
2,360,485	-		PGA1_c22760	0.63	-0.4
2,360,485	-		PGA1_c22760	0.63	+0.3
2,360,514	+		PGA1_c22760	0.65	-2.7
2,360,514	+		PGA1_c22760	0.65	+1.1
2,360,522	+		PGA1_c22760	0.66	-0.7
2,360,522	-		PGA1_c22760	0.66	-0.9
2,360,591	+		PGA1_c22760	0.70	+1.0
2,360,599	-		PGA1_c22760	0.71	+1.0
2,360,601	+		PGA1_c22760	0.71	+0.8
2,360,601	+		PGA1_c22760	0.71	-0.1
2,360,609	-		PGA1_c22760	0.71	+0.7
2,360,609	-		PGA1_c22760	0.71	-0.3
2,360,624	+		PGA1_c22760	0.72	+0.3
2,360,624	+		PGA1_c22760	0.72	+1.2
2,360,632	-		PGA1_c22760	0.73	-1.2
2,360,632	-		PGA1_c22760	0.73	-0.5
2,360,651	+		PGA1_c22760	0.74	+1.0
2,360,656	+		PGA1_c22760	0.74	+1.1
2,360,672	-		PGA1_c22760	0.75	-0.3
2,360,689	+		PGA1_c22760	0.76	+1.1
2,360,689	+		PGA1_c22760	0.76	-0.7
2,360,689	+		PGA1_c22760	0.76	+0.2
2,360,697	-		PGA1_c22760	0.77	+0.8
2,360,770	+		PGA1_c22760	0.81	+1.6
2,360,773	-		PGA1_c22760	0.81	-0.6
2,360,799	-		PGA1_c22760	0.83	+0.9
2,360,803	+		PGA1_c22760	0.83	-1.7
2,360,882	+		PGA1_c22760	0.88	+0.0
2,360,886	-		PGA1_c22760	0.88	-0.3
2,360,890	+		PGA1_c22760	0.89	-1.5
2,360,890	-		PGA1_c22760	0.89	+0.4
2,360,927	-				+0.9
2,360,931	+				-1.1
2,360,931	+				-0.3
2,360,934	-				+0.5
2,360,939	-				-1.7
2,360,939	-				-0.7
2,360,939	-				-1.5
2,361,036	+				-0.5
2,361,051	-				+0.9
2,361,063	-				+0.7
2,361,064	+				+2.4
2,361,068	-				+0.4
2,361,076	-				-1.3
2,361,082	+				+0.4
2,361,092	+				-0.3
2,361,092	+				+0.2
2,361,122	+				+0.3
2,361,201	+				-0.8
2,361,209	-				-1.2
2,361,209	-				-0.0
2,361,254	+				-0.3
2,361,264	+				+0.4
2,361,324	-				-0.7
2,361,324	-				-0.5
2,361,352	-				-2.2
2,361,361	+				+0.5
2,361,369	-				+0.6
2,361,371	-				-0.5
2,361,388	+				+0.5
2,361,426	+		PGA1_c22770	0.13	-0.4
2,361,426	+		PGA1_c22770	0.13	-2.1
2,361,434	-		PGA1_c22770	0.14	+1.9
2,361,448	-		PGA1_c22770	0.15	-1.2
2,361,460	-		PGA1_c22770	0.17	-0.9
2,361,460	-		PGA1_c22770	0.17	-0.2
2,361,488	+		PGA1_c22770	0.20	-0.8
2,361,496	-		PGA1_c22770	0.20	-0.0
2,361,559	-		PGA1_c22770	0.27	-0.3
2,361,580	-		PGA1_c22770	0.30	-1.1
2,361,603	+		PGA1_c22770	0.32	-1.5
2,361,660	+		PGA1_c22770	0.38	-2.8
2,361,688	+		PGA1_c22770	0.41	-1.1
2,361,695	+		PGA1_c22770	0.42	-0.5
2,361,696	-		PGA1_c22770	0.42	+0.4
2,361,703	-		PGA1_c22770	0.43	+0.5
2,361,731	+		PGA1_c22770	0.46	+0.2
2,361,739	-		PGA1_c22770	0.47	+0.6
2,361,822	+		PGA1_c22770	0.56	+1.1
2,361,830	-		PGA1_c22770	0.57	+0.5
2,361,842	+		PGA1_c22770	0.58	-0.6
2,361,934	-		PGA1_c22770	0.68	+0.1
2,361,996	+		PGA1_c22770	0.75	-0.7
2,361,996	+		PGA1_c22770	0.75	-1.0
2,362,006	+		PGA1_c22770	0.76	-0.3
2,362,009	-		PGA1_c22770	0.76	-0.5
2,362,014	-		PGA1_c22770	0.77	-2.4
2,362,037	+		PGA1_c22770	0.79	+1.1
2,362,046	-		PGA1_c22770	0.80	-0.6
2,362,071	-		PGA1_c22770	0.83	+1.1
2,362,077	+		PGA1_c22770	0.83	-0.2
2,362,077	+		PGA1_c22770	0.83	+0.1
2,362,085	-		PGA1_c22770	0.84	+0.7
2,362,085	-		PGA1_c22770	0.84	+0.1
2,362,085	-		PGA1_c22770	0.84	+0.9
2,362,085	-		PGA1_c22770	0.84	+0.1
2,362,140	-				-1.3
2,362,191	+				+1.5
2,362,191	+				-0.3
2,362,191	+				-0.0
2,362,191	+				-1.5
2,362,191	+				+1.0
2,362,191	+				+0.5
2,362,191	+				-0.5
2,362,199	-				+0.7
2,362,199	-				-0.3
2,362,199	-				-0.4
2,362,199	-				+0.5
2,362,199	-				+0.2
2,362,199	-				-0.6
2,362,224	+				+0.3
2,362,224	+				+0.1
2,362,224	+				+0.7
2,362,232	-				+1.4
2,362,262	+				-0.1
2,362,262	+				+0.1
2,362,270	-				-0.1
2,362,270	-				-0.3
2,362,282	+				-0.1
2,362,302	+				-1.5
2,362,325	+				-1.8
2,362,337	-				-1.2
2,362,431	+		PGA1_c22780	0.16	+0.4
2,362,478	-		PGA1_c22780	0.20	+1.2
2,362,503	+		PGA1_c22780	0.23	+0.9
2,362,553	+		PGA1_c22780	0.27	+0.9
2,362,588	-		PGA1_c22780	0.31	-2.8
2,362,618	-		PGA1_c22780	0.33	+0.5
2,362,641	+		PGA1_c22780	0.36	-0.5
2,362,645	-		PGA1_c22780	0.36	-0.6
2,362,663	+		PGA1_c22780	0.38	+0.1
2,362,718	+		PGA1_c22780	0.43	-0.8
2,362,726	-		PGA1_c22780	0.44	-1.3
2,362,806	-		PGA1_c22780	0.51	-0.0
2,362,815	-		PGA1_c22780	0.52	+0.7
2,362,835	+		PGA1_c22780	0.54	-0.8
2,362,843	-		PGA1_c22780	0.55	-0.9
2,362,843	-		PGA1_c22780	0.55	-0.6
2,362,843	-		PGA1_c22780	0.55	-0.8
2,362,855	+		PGA1_c22780	0.56	+0.4
2,362,855	+		PGA1_c22780	0.56	+0.5
2,362,863	-		PGA1_c22780	0.57	-1.2
2,362,863	-		PGA1_c22780	0.57	-1.7
2,362,863	-		PGA1_c22780	0.57	+0.5
2,362,930	+		PGA1_c22780	0.63	+0.0
2,363,020	-		PGA1_c22780	0.71	-2.9
2,363,020	-		PGA1_c22780	0.71	-1.1
2,363,035	-		PGA1_c22780	0.73	+0.2
2,363,048	+		PGA1_c22780	0.74	+2.0
2,363,053	+		PGA1_c22780	0.75	+0.9
2,363,095	+		PGA1_c22780	0.78	-0.3
2,363,116	+		PGA1_c22780	0.80	-0.4
2,363,117	+		PGA1_c22780	0.81	-0.6
2,363,137	+		PGA1_c22780	0.82	+1.2
2,363,161	+		PGA1_c22780	0.85	+0.9
2,363,218	+				-2.8
2,363,230	+				+1.5
2,363,230	+				-0.6