Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c22450

Experiment: Carbon source L-Ornithine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source L-Ornithine 5 mM
2,328,937	-		PGA1_c22440	0.47	-1.1
2,328,958	+		PGA1_c22440	0.49	+0.9
2,328,982	+		PGA1_c22440	0.50	-0.8
2,329,007	-		PGA1_c22440	0.51	-2.6
2,329,017	+		PGA1_c22440	0.52	-2.1
2,329,080	-		PGA1_c22440	0.55	-3.1
2,329,090	-		PGA1_c22440	0.56	+0.1
2,329,104	+		PGA1_c22440	0.57	-0.1
2,329,104	+		PGA1_c22440	0.57	+0.8
2,329,112	-		PGA1_c22440	0.57	+1.6
2,329,112	-		PGA1_c22440	0.57	+0.8
2,329,112	-		PGA1_c22440	0.57	-1.7
2,329,112	-		PGA1_c22440	0.57	+0.0
2,329,112	-		PGA1_c22440	0.57	-0.7
2,329,112	-		PGA1_c22440	0.57	+1.3
2,329,151	+		PGA1_c22440	0.59	+0.1
2,329,267	+		PGA1_c22440	0.66	-0.2
2,329,294	+		PGA1_c22440	0.68	+0.1
2,329,335	+		PGA1_c22440	0.70	-0.6
2,329,434	-		PGA1_c22440	0.76	-0.2
2,329,434	-		PGA1_c22440	0.76	-0.9
2,329,451	-		PGA1_c22440	0.76	-1.1
2,329,472	+		PGA1_c22440	0.78	+0.9
2,329,490	-		PGA1_c22440	0.79	+1.5
2,329,517	+		PGA1_c22440	0.80	+0.3
2,329,520	+		PGA1_c22440	0.80	-0.1
2,329,521	+		PGA1_c22440	0.80	-0.7
2,329,525	-		PGA1_c22440	0.81	-1.6
2,329,525	-		PGA1_c22440	0.81	+1.1
2,329,529	-		PGA1_c22440	0.81	-0.4
2,329,529	-		PGA1_c22440	0.81	-1.9
2,329,539	-		PGA1_c22440	0.81	-1.1
2,329,539	-		PGA1_c22440	0.81	-0.5
2,329,539	-		PGA1_c22440	0.81	+0.5
2,329,597	+		PGA1_c22440	0.85	+1.0
2,329,605	-		PGA1_c22440	0.85	+0.2
2,329,605	-		PGA1_c22440	0.85	-0.8
2,329,613	-		PGA1_c22440	0.86	-2.1
2,329,638	+		PGA1_c22440	0.87	-0.6
2,329,642	+		PGA1_c22440	0.87	-0.4
2,329,642	+		PGA1_c22440	0.87	-1.7
2,329,650	-		PGA1_c22440	0.88	-1.6
2,329,675	+		PGA1_c22440	0.89	+0.3
2,329,677	+		PGA1_c22440	0.89	-0.7
2,329,677	+		PGA1_c22440	0.89	-1.6
2,329,677	+		PGA1_c22440	0.89	+0.8
2,329,677	+		PGA1_c22440	0.89	+1.1
2,329,682	+		PGA1_c22440	0.90	+0.7
2,329,685	-		PGA1_c22440	0.90	-2.1
2,329,685	-		PGA1_c22440	0.90	-2.4
2,329,685	-		PGA1_c22440	0.90	+0.5
2,329,685	-		PGA1_c22440	0.90	+1.9
2,329,718	+				+0.0
2,329,742	-				-2.0
2,329,752	-				-0.9
2,329,787	+				-1.8
2,329,909	+				+0.5
2,329,946	-		PGA1_c22450	0.18	-0.4
2,329,983	-		PGA1_c22450	0.26	-1.0
2,329,993	-		PGA1_c22450	0.28	-0.7
2,329,993	-		PGA1_c22450	0.28	-0.8
2,330,008	-		PGA1_c22450	0.31	+0.2
2,330,008	-		PGA1_c22450	0.31	+0.1
2,330,074	+		PGA1_c22450	0.46	-0.8
2,330,101	+		PGA1_c22450	0.51	-0.2
2,330,101	+		PGA1_c22450	0.51	+1.8
2,330,101	+		PGA1_c22450	0.51	-0.7
2,330,109	-		PGA1_c22450	0.53	-0.9
2,330,109	-		PGA1_c22450	0.53	-1.1
2,330,109	-		PGA1_c22450	0.53	+0.0
2,330,109	-		PGA1_c22450	0.53	+0.4
2,330,109	-		PGA1_c22450	0.53	-1.0
2,330,109	-		PGA1_c22450	0.53	-1.1
2,330,109	-		PGA1_c22450	0.53	-0.2
2,330,109	-		PGA1_c22450	0.53	-1.1
2,330,146	-		PGA1_c22450	0.61	+0.3
2,330,155	+		PGA1_c22450	0.63	+0.0
2,330,155	+		PGA1_c22450	0.63	+0.7
2,330,163	-		PGA1_c22450	0.65	+0.4
2,330,195	+		PGA1_c22450	0.72	-0.6
2,330,209	+		PGA1_c22450	0.75	-0.3
2,330,222	-		PGA1_c22450	0.78	-0.9
2,330,245	+		PGA1_c22450	0.83	-2.1
2,330,303	+				+0.3
2,330,313	+				-0.6
2,330,313	+				+0.3
2,330,321	-				+0.2
2,330,321	-				-1.7
2,330,326	-				-2.4
2,330,378	+				-0.3
2,330,386	-				+0.7
2,330,386	-				-0.2
2,330,387	-				-0.5
2,330,406	+				-1.9
2,330,412	-				-1.3
2,330,418	-				+0.5
2,330,425	+				-0.9
2,330,425	+				-1.8
2,330,451	+				-1.0
2,330,489	-				+0.2
2,330,491	+				+0.5
2,330,499	-				+0.3
2,330,521	+				-0.7
2,330,555	-				+0.9
2,330,561	+				+0.5
2,330,569	-				-2.9
2,330,569	-				-2.0
2,330,569	-				+0.4
2,330,569	-				-1.0
2,330,638	-				-1.6
2,330,643	-				-1.5
2,330,654	+				+0.9
2,330,663	-				-0.3
2,330,730	+				+0.3
2,330,761	+				-0.3
2,330,761	+				-0.6
2,330,761	+				+0.4
2,330,769	-				-1.4
2,330,779	-				-0.8
2,330,892	+				-0.0
2,330,892	+				-0.4
2,330,900	-				+1.3
2,330,925	+				+1.5
2,330,932	+				-1.0
2,330,933	-				+1.3
2,330,933	-				+0.5
2,330,944	+				+1.2
2,330,944	+				-0.2
2,330,944	+				-2.5
2,330,944	+				+0.4
2,330,944	+				-1.1
2,330,952	-				+0.1
2,330,952	-				+0.4
2,330,952	-				+0.7
2,330,960	+				+1.4
2,330,962	-				-1.7
2,330,995	-		PGA1_c22460	0.11	-1.6
2,331,012	-		PGA1_c22460	0.13	-0.4
2,331,022	-		PGA1_c22460	0.14	+0.5
2,331,022	-		PGA1_c22460	0.14	-0.8
2,331,056	-		PGA1_c22460	0.19	-0.5
2,331,129	+		PGA1_c22460	0.28	-1.7
2,331,129	-		PGA1_c22460	0.28	-0.4
2,331,136	-		PGA1_c22460	0.29	+1.1
2,331,156	+		PGA1_c22460	0.32	+0.6
2,331,232	-		PGA1_c22460	0.42	+0.1
2,331,234	+		PGA1_c22460	0.42	-1.1
2,331,234	+		PGA1_c22460	0.42	-2.1
2,331,242	-		PGA1_c22460	0.43	+2.3
2,331,242	-		PGA1_c22460	0.43	+1.5
2,331,242	-		PGA1_c22460	0.43	-0.7
2,331,242	-		PGA1_c22460	0.43	+1.7
2,331,255	-		PGA1_c22460	0.45	-2.1
2,331,292	+		PGA1_c22460	0.50	+0.5
2,331,292	+		PGA1_c22460	0.50	-1.7
2,331,300	-		PGA1_c22460	0.51	-2.1
2,331,302	+		PGA1_c22460	0.51	-0.3
2,331,310	-		PGA1_c22460	0.52	-1.4
2,331,312	+		PGA1_c22460	0.53	+0.2
2,331,320	-		PGA1_c22460	0.54	+2.4
2,331,320	-		PGA1_c22460	0.54	+0.1