Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c22180

Experiment: Carbon source L-Ornithine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source L-Ornithine 5 mM
2,298,131	+		PGA1_c22170	0.23	-2.3
2,298,131	+		PGA1_c22170	0.23	-0.5
2,298,131	+		PGA1_c22170	0.23	-1.5
2,298,139	-		PGA1_c22170	0.24	-1.9
2,298,190	+		PGA1_c22170	0.29	-1.2
2,298,198	-		PGA1_c22170	0.30	+0.5
2,298,198	-		PGA1_c22170	0.30	-1.2
2,298,236	+		PGA1_c22170	0.34	-1.5
2,298,267	-		PGA1_c22170	0.37	+0.2
2,298,280	+		PGA1_c22170	0.39	+0.3
2,298,284	+		PGA1_c22170	0.39	-0.2
2,298,347	+		PGA1_c22170	0.46	+0.6
2,298,366	+		PGA1_c22170	0.48	+1.0
2,298,374	-		PGA1_c22170	0.49	-0.7
2,298,376	-		PGA1_c22170	0.49	-0.8
2,298,459	+		PGA1_c22170	0.58	-2.0
2,298,459	+		PGA1_c22170	0.58	-1.1
2,298,459	+		PGA1_c22170	0.58	+0.9
2,298,536	+		PGA1_c22170	0.66	+1.1
2,298,550	+		PGA1_c22170	0.68	-2.7
2,298,555	+		PGA1_c22170	0.68	-0.5
2,298,558	-		PGA1_c22170	0.69	-1.1
2,298,558	-		PGA1_c22170	0.69	+2.1
2,298,573	-		PGA1_c22170	0.70	+0.6
2,298,573	-		PGA1_c22170	0.70	-0.1
2,298,671	-		PGA1_c22170	0.81	-0.4
2,298,753	+		PGA1_c22170	0.90	+1.3
2,298,758	+				+0.2
2,298,758	+				+1.4
2,298,766	-				+1.6
2,298,766	-				+0.1
2,298,886	-				-1.1
2,298,891	-				-1.3
2,298,966	+				-0.8
2,298,979	-				+0.4
2,299,023	+				-0.4
2,299,026	+				-2.1
2,299,074	-				-1.1
2,299,135	+				-0.7
2,299,135	+				-0.5
2,299,260	+		PGA1_c22180	0.14	-2.4
2,299,313	-		PGA1_c22180	0.17	-1.2
2,299,577	+		PGA1_c22180	0.31	-0.7
2,299,584	+		PGA1_c22180	0.31	+0.3
2,299,646	+		PGA1_c22180	0.35	+0.1
2,299,654	-		PGA1_c22180	0.35	-1.8
2,299,654	-		PGA1_c22180	0.35	-2.2
2,299,662	-		PGA1_c22180	0.36	-1.4
2,299,698	-		PGA1_c22180	0.38	-1.6
2,299,698	-		PGA1_c22180	0.38	+0.0
2,299,698	-		PGA1_c22180	0.38	-0.7
2,299,740	-		PGA1_c22180	0.40	-0.9
2,299,762	-		PGA1_c22180	0.41	-0.2
2,299,827	-		PGA1_c22180	0.44	-2.2
2,299,837	-		PGA1_c22180	0.45	-1.4
2,299,881	-		PGA1_c22180	0.47	-0.5
2,299,926	-		PGA1_c22180	0.50	-1.8
2,299,985	+		PGA1_c22180	0.53	-0.7
2,300,009	-		PGA1_c22180	0.54	-1.9
2,300,027	-		PGA1_c22180	0.55	-1.3
2,300,187	-		PGA1_c22180	0.63	+0.6
2,300,330	+		PGA1_c22180	0.71	-0.6
2,300,331	-		PGA1_c22180	0.71	-0.8
2,300,340	+		PGA1_c22180	0.71	-0.5
2,300,412	-		PGA1_c22180	0.75	-0.2
2,300,482	+		PGA1_c22180	0.79	-0.2
2,300,490	-		PGA1_c22180	0.79	-0.5
2,300,490	-		PGA1_c22180	0.79	+0.2
2,300,510	+		PGA1_c22180	0.80	-2.0
2,300,530	+		PGA1_c22180	0.81	+0.1
2,300,551	-		PGA1_c22180	0.82	-2.5
2,300,585	-		PGA1_c22180	0.84	-1.1
2,300,615	+		PGA1_c22180	0.86	-2.7
2,300,623	-		PGA1_c22180	0.86	+1.7
2,300,623	-		PGA1_c22180	0.86	-0.2
2,300,693	+				-1.2
2,300,711	-				-2.0
2,300,712	-				-1.4
2,300,795	-				-1.4
2,300,849	+				-1.5
2,300,849	+				-0.1
2,300,857	-				+0.5
2,300,867	-				-0.8
2,300,867	-				+0.1
2,300,892	+				+3.1
2,300,892	+				-1.5
2,300,893	+				-1.1
2,300,893	+				-1.5
2,300,898	+				+0.0
2,300,909	-				-0.2
2,300,976	+				+1.9
2,300,976	+				-0.6
2,300,978	-				-1.8
2,300,984	-				-2.0