Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c21740

Experiment: Carbon source L-Ornithine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source L-Ornithine 5 mM
2,252,943	+				+0.2
2,253,024	-				-1.9
2,253,050	+				+0.7
2,253,055	+				-1.3
2,253,087	-				-0.2
2,253,089	-				+1.6
2,253,089	-				+0.3
2,253,117	+				-0.8
2,253,130	-				+0.8
2,253,130	-				-0.4
2,253,152	+				-0.1
2,253,152	+				-1.4
2,253,160	-				-1.6
2,253,160	-				-1.6
2,253,160	-				-0.7
2,253,174	-				-0.6
2,253,200	-				+0.6
2,253,210	+				-1.4
2,253,210	+				+0.8
2,253,274	+		PGA1_c21730	0.10	+0.5
2,253,361	-		PGA1_c21730	0.25	-0.2
2,253,371	+		PGA1_c21730	0.26	-0.5
2,253,372	-		PGA1_c21730	0.26	-1.6
2,253,413	+		PGA1_c21730	0.33	-1.1
2,253,418	+		PGA1_c21730	0.34	+0.7
2,253,464	-		PGA1_c21730	0.42	+0.4
2,253,496	-		PGA1_c21730	0.47	+0.5
2,253,503	+		PGA1_c21730	0.48	+1.0
2,253,519	-		PGA1_c21730	0.51	+0.4
2,253,519	-		PGA1_c21730	0.51	-0.2
2,253,529	-		PGA1_c21730	0.52	+1.0
2,253,529	-		PGA1_c21730	0.52	+0.5
2,253,529	-		PGA1_c21730	0.52	-0.7
2,253,565	+		PGA1_c21730	0.58	-0.0
2,253,573	-		PGA1_c21730	0.60	-0.5
2,253,575	-		PGA1_c21730	0.60	-2.0
2,253,575	-		PGA1_c21730	0.60	-1.8
2,253,615	+		PGA1_c21730	0.67	-0.4
2,253,655	-		PGA1_c21730	0.73	+1.5
2,253,663	+		PGA1_c21730	0.74	+0.3
2,253,673	+		PGA1_c21730	0.76	-0.5
2,253,673	-		PGA1_c21730	0.76	-1.4
2,253,722	+		PGA1_c21730	0.84	+0.9
2,253,739	+		PGA1_c21730	0.87	-2.1
2,253,747	-		PGA1_c21730	0.88	-1.5
2,253,769	+				+0.4
2,253,773	-				+1.7
2,253,827	-				+1.2
2,253,841	+				+0.1
2,253,881	+				-0.3
2,253,979	-				-1.0
2,254,042	+		PGA1_c21740	0.12	+0.5
2,254,074	+		PGA1_c21740	0.16	-0.7
2,254,074	+		PGA1_c21740	0.16	-0.5
2,254,099	+		PGA1_c21740	0.19	-0.9
2,254,110	+		PGA1_c21740	0.20	-0.6
2,254,244	-		PGA1_c21740	0.35	-0.9
2,254,248	+		PGA1_c21740	0.36	-1.4
2,254,280	+		PGA1_c21740	0.39	-1.5
2,254,363	-		PGA1_c21740	0.49	+0.2
2,254,404	-		PGA1_c21740	0.53	-1.0
2,254,411	+		PGA1_c21740	0.54	+0.2
2,254,485	+		PGA1_c21740	0.62	+0.3
2,254,524	-				-0.2
2,254,544	-		PGA1_c21740	0.69	-2.8
2,254,561	-		PGA1_c21740	0.71	-0.7
2,254,568	-		PGA1_c21740	0.72	-0.3
2,254,592	+		PGA1_c21740	0.75	-1.4
2,254,600	-		PGA1_c21740	0.75	-1.1
2,254,622	+		PGA1_c21740	0.78	-1.1
2,254,676	+		PGA1_c21740	0.84	+0.9
2,254,725	+		PGA1_c21740	0.90	+0.0
2,254,754	+				+1.3
2,254,780	+				+0.9
2,254,837	+				+0.2
2,254,907	-				-0.7
2,254,928	+				+1.1
2,254,928	+				-0.6
2,254,936	-		PGA1_c21750	0.11	+0.7
2,254,939	+		PGA1_c21750	0.11	-0.9
2,254,946	+		PGA1_c21750	0.12	+2.1
2,254,966	+		PGA1_c21750	0.14	-0.8
2,254,968	+		PGA1_c21750	0.14	+0.1
2,254,986	+		PGA1_c21750	0.16	-2.5
2,254,999	+		PGA1_c21750	0.18	+0.1
2,255,001	+		PGA1_c21750	0.18	-2.4
2,255,007	-		PGA1_c21750	0.18	+0.6
2,255,007	-		PGA1_c21750	0.18	+0.3
2,255,042	-		PGA1_c21750	0.22	-0.9
2,255,097	-		PGA1_c21750	0.28	+0.8
2,255,107	-		PGA1_c21750	0.29	+2.5
2,255,139	+		PGA1_c21750	0.33	-1.1
2,255,139	+		PGA1_c21750	0.33	-0.7
2,255,147	-		PGA1_c21750	0.34	-0.2
2,255,243	-		PGA1_c21750	0.44	+0.9
2,255,243	-		PGA1_c21750	0.44	+0.6
2,255,280	-		PGA1_c21750	0.48	-0.7
2,255,290	+		PGA1_c21750	0.49	+0.4
2,255,291	+		PGA1_c21750	0.49	+1.1
2,255,299	-		PGA1_c21750	0.50	-1.2
2,255,382	+		PGA1_c21750	0.59	-0.2
2,255,400	-		PGA1_c21750	0.61	+0.4
2,255,505	+		PGA1_c21750	0.73	-0.5
2,255,564	+		PGA1_c21750	0.79	-0.9
2,255,564	+		PGA1_c21750	0.79	-0.0
2,255,572	-		PGA1_c21750	0.80	-0.1
2,255,572	-		PGA1_c21750	0.80	+0.2
2,255,577	-		PGA1_c21750	0.80	-0.1
2,255,676	+				+0.6
2,255,764	+				+0.3
2,255,764	+				-0.5
2,255,772	-				+0.6
2,255,796	+				+0.3
2,255,804	-				+0.8