Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c20710

Experiment: Carbon source L-Ornithine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source L-Ornithine 5 mM
2,147,033	-		PGA1_c20700	0.48	-0.5
2,147,265	-		PGA1_c20700	0.61	-2.5
2,147,289	-		PGA1_c20700	0.63	-0.6
2,147,313	-		PGA1_c20700	0.64	+0.8
2,147,402	-		PGA1_c20700	0.69	-1.1
2,147,531	+		PGA1_c20700	0.76	-2.7
2,147,538	-		PGA1_c20700	0.76	-0.9
2,147,539	-		PGA1_c20700	0.76	-2.0
2,147,546	-		PGA1_c20700	0.77	-2.2
2,147,549	-		PGA1_c20700	0.77	+0.8
2,147,552	+		PGA1_c20700	0.77	+0.7
2,147,557	+		PGA1_c20700	0.77	-0.3
2,147,557	+		PGA1_c20700	0.77	-0.8
2,147,592	-		PGA1_c20700	0.79	+0.0
2,147,607	-		PGA1_c20700	0.80	+0.0
2,147,740	-		PGA1_c20700	0.88	+1.2
2,147,880	+				-1.5
2,147,880	+				-0.8
2,147,927	+				+0.0
2,147,935	-				+0.0
2,147,972	+				-1.2
2,147,976	+				-1.1
2,147,984	-				-1.9
2,147,986	+				+0.0
2,147,999	+				+0.9
2,148,128	+				-2.4
2,148,153	+		PGA1_c20710	0.12	-1.2
2,148,153	+		PGA1_c20710	0.12	+0.2
2,148,161	-		PGA1_c20710	0.12	+0.3
2,148,161	-		PGA1_c20710	0.12	+0.8
2,148,161	-		PGA1_c20710	0.12	-0.9
2,148,161	-		PGA1_c20710	0.12	-1.0
2,148,263	+		PGA1_c20710	0.21	-0.1
2,148,332	+		PGA1_c20710	0.27	+0.2
2,148,367	+		PGA1_c20710	0.30	-0.6
2,148,367	+		PGA1_c20710	0.30	-0.7
2,148,367	+		PGA1_c20710	0.30	-0.7
2,148,367	+		PGA1_c20710	0.30	+1.7
2,148,375	-		PGA1_c20710	0.30	-0.6
2,148,377	+		PGA1_c20710	0.31	+0.3
2,148,378	+		PGA1_c20710	0.31	+1.2
2,148,396	-		PGA1_c20710	0.32	-1.4
2,148,402	+		PGA1_c20710	0.33	-0.2
2,148,458	+		PGA1_c20710	0.37	-0.6
2,148,458	+		PGA1_c20710	0.37	+1.3
2,148,612	-		PGA1_c20710	0.50	+1.9
2,148,625	-		PGA1_c20710	0.51	+0.1
2,148,644	-		PGA1_c20710	0.53	+1.9
2,148,667	-		PGA1_c20710	0.55	-2.0
2,148,706	+		PGA1_c20710	0.58	+1.8
2,148,709	+		PGA1_c20710	0.59	+2.7
2,148,719	+		PGA1_c20710	0.59	+0.9
2,148,719	+		PGA1_c20710	0.59	+1.0
2,148,736	+		PGA1_c20710	0.61	-0.8
2,148,763	-		PGA1_c20710	0.63	+0.4
2,148,861	+		PGA1_c20710	0.71	+0.3
2,148,891	-		PGA1_c20710	0.74	+1.4
2,148,925	+		PGA1_c20710	0.77	-1.7
2,148,991	+		PGA1_c20710	0.82	-2.2
2,149,016	+		PGA1_c20710	0.84	+1.6
2,149,024	-		PGA1_c20710	0.85	+0.8
2,149,062	+		PGA1_c20710	0.88	-1.2
2,149,062	+		PGA1_c20710	0.88	+0.3
2,149,070	-		PGA1_c20710	0.89	-1.6
2,149,161	-				+0.1
2,149,170	+				+0.4
2,149,171	+				+0.1
2,149,179	-				-0.2
2,149,179	-				-1.6
2,149,188	-				+1.4
2,149,193	+				+0.6
2,149,196	-				-2.5
2,149,196	-				+0.3
2,149,196	-				-1.5
2,149,196	-				+0.4
2,149,229	-				-2.5
2,149,243	+				-0.6
2,149,243	-				-0.1
2,149,248	-				-1.7
2,149,336	+				+0.0
2,149,376	-				+1.2
2,149,388	+				-0.1
2,149,413	-		PGA1_c20720	0.12	+1.4
2,149,458	+		PGA1_c20720	0.15	+0.1
2,149,466	-		PGA1_c20720	0.16	+0.7
2,149,466	-		PGA1_c20720	0.16	+0.0
2,149,466	-		PGA1_c20720	0.16	+0.6
2,149,466	-		PGA1_c20720	0.16	-0.1
2,149,466	-		PGA1_c20720	0.16	+0.0
2,149,483	-		PGA1_c20720	0.17	-0.2
2,149,559	+		PGA1_c20720	0.24	-0.8
2,149,577	-		PGA1_c20720	0.25	-0.6
2,149,648	+		PGA1_c20720	0.31	+1.1
2,149,664	-		PGA1_c20720	0.32	-0.5
2,149,726	+		PGA1_c20720	0.37	-1.7
2,149,838	+		PGA1_c20720	0.47	+1.2
2,149,846	-		PGA1_c20720	0.47	-2.5
2,149,848	+		PGA1_c20720	0.48	+0.1
2,149,848	+		PGA1_c20720	0.48	-0.0
2,149,851	-		PGA1_c20720	0.48	+0.3
2,149,853	+		PGA1_c20720	0.48	-1.2
2,149,861	-		PGA1_c20720	0.49	-1.1
2,149,895	+		PGA1_c20720	0.51	-0.6
2,149,908	-		PGA1_c20720	0.53	+0.6
2,149,910	+		PGA1_c20720	0.53	+1.1
2,149,920	+		PGA1_c20720	0.54	+0.2
2,149,944	-		PGA1_c20720	0.56	+0.9
2,149,974	-		PGA1_c20720	0.58	-0.9
2,149,999	-		PGA1_c20720	0.60	-2.0
2,150,127	+		PGA1_c20720	0.71	+0.0
2,150,145	-		PGA1_c20720	0.72	-2.4