Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c18980

Experiment: Carbon source L-Ornithine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source L-Ornithine 5 mM
1,967,796	+				+1.5
1,967,820	+				-0.3
1,967,870	-				-2.0
1,967,872	+				+0.5
1,967,880	-				-1.2
1,967,987	-		PGA1_c18970	0.24	-0.3
1,967,991	+		PGA1_c18970	0.25	-0.4
1,967,991	+		PGA1_c18970	0.25	+0.5
1,967,997	+		PGA1_c18970	0.26	-3.0
1,967,999	-		PGA1_c18970	0.26	-2.4
1,967,999	-		PGA1_c18970	0.26	+0.6
1,968,032	-		PGA1_c18970	0.31	-0.9
1,968,044	-		PGA1_c18970	0.32	-1.5
1,968,054	-		PGA1_c18970	0.34	-0.6
1,968,155	-		PGA1_c18970	0.48	+0.2
1,968,155	-		PGA1_c18970	0.48	+0.5
1,968,155	-		PGA1_c18970	0.48	+1.1
1,968,155	-		PGA1_c18970	0.48	-1.5
1,968,221	+		PGA1_c18970	0.57	+1.5
1,968,337	+		PGA1_c18970	0.73	+0.7
1,968,337	+		PGA1_c18970	0.73	-0.1
1,968,345	-		PGA1_c18970	0.74	-2.0
1,968,345	-		PGA1_c18970	0.74	-0.9
1,968,347	+		PGA1_c18970	0.74	-0.8
1,968,382	+		PGA1_c18970	0.79	-1.3
1,968,405	+		PGA1_c18970	0.82	-1.8
1,968,501	-				+1.0
1,968,537	+				+1.3
1,968,582	+				-0.1
1,968,615	+				-2.4
1,968,814	+		PGA1_c18980	0.28	+0.8
1,968,818	+		PGA1_c18980	0.29	-0.4
1,968,829	-		PGA1_c18980	0.30	+0.8
1,968,946	+		PGA1_c18980	0.41	-0.4
1,968,974	+		PGA1_c18980	0.44	-0.1
1,968,974	+		PGA1_c18980	0.44	+0.1
1,968,974	+		PGA1_c18980	0.44	-2.1
1,968,974	+		PGA1_c18980	0.44	-0.3
1,968,982	-		PGA1_c18980	0.45	+2.8
1,968,982	-		PGA1_c18980	0.45	-0.5
1,968,982	-		PGA1_c18980	0.45	-0.3
1,969,007	+		PGA1_c18980	0.47	+0.8
1,969,012	+		PGA1_c18980	0.48	+1.3
1,969,020	-		PGA1_c18980	0.48	-1.8
1,969,042	-		PGA1_c18980	0.51	+0.5
1,969,078	+		PGA1_c18980	0.54	+0.9
1,969,086	-		PGA1_c18980	0.55	+0.5
1,969,148	-		PGA1_c18980	0.61	-0.1
1,969,173	+		PGA1_c18980	0.64	-0.2
1,969,173	+		PGA1_c18980	0.64	-1.5
1,969,181	+		PGA1_c18980	0.64	+2.4
1,969,189	-		PGA1_c18980	0.65	+0.4
1,969,228	-		PGA1_c18980	0.69	+0.2
1,969,233	-		PGA1_c18980	0.69	+0.6
1,969,236	+		PGA1_c18980	0.70	+1.7
1,969,265	-		PGA1_c18980	0.73	-0.8
1,969,266	+		PGA1_c18980	0.73	-0.0
1,969,266	+		PGA1_c18980	0.73	+0.5
1,969,266	+		PGA1_c18980	0.73	+2.0
1,969,274	-		PGA1_c18980	0.73	+1.5
1,969,281	-		PGA1_c18980	0.74	+0.3
1,969,381	+		PGA1_c18980	0.84	+1.1
1,969,417	+		PGA1_c18980	0.88	-0.6
1,969,425	-		PGA1_c18980	0.88	-0.2
1,969,453	+				+0.7
1,969,457	-				-0.1
1,969,461	-				-1.0
1,969,649	+				+1.8
1,969,655	-				+0.5
1,969,727	-				+0.9
1,969,728	-				+0.6
1,969,767	-				-0.0
1,969,830	-				-0.8
1,969,837	-				-0.3