Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c15070

Experiment: Carbon source L-Ornithine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source L-Ornithine 5 mM
1,565,278	+		PGA1_c15060	0.12	-1.1
1,565,490	+		PGA1_c15060	0.34	+0.1
1,565,522	-		PGA1_c15060	0.37	-0.3
1,565,593	-		PGA1_c15060	0.44	+0.4
1,565,657	-		PGA1_c15060	0.51	-0.9
1,565,699	-		PGA1_c15060	0.55	+0.6
1,565,798	+		PGA1_c15060	0.66	+0.3
1,565,820	+		PGA1_c15060	0.68	+2.1
1,565,828	-		PGA1_c15060	0.69	+0.1
1,565,847	+		PGA1_c15060	0.71	-1.9
1,565,898	+		PGA1_c15060	0.76	-1.4
1,565,926	+		PGA1_c15060	0.79	+0.8
1,566,021	+		PGA1_c15060	0.89	+0.8
1,566,029	-		PGA1_c15060	0.90	+0.3
1,566,029	-		PGA1_c15060	0.90	-2.4
1,566,049	-				+0.8
1,566,068	+				-1.7
1,566,078	-				+0.3
1,566,088	+				-0.4
1,566,190	+				+0.2
1,566,190	+				-1.3
1,566,198	-				-1.9
1,566,198	-				-0.8
1,566,208	-				+0.3
1,566,280	+		PGA1_c15070	0.12	-0.0
1,566,325	-		PGA1_c15070	0.18	-0.6
1,566,391	-		PGA1_c15070	0.26	-0.4
1,566,419	+		PGA1_c15070	0.29	+0.1
1,566,458	+		PGA1_c15070	0.33	-0.1
1,566,482	+		PGA1_c15070	0.36	-1.7
1,566,519	-		PGA1_c15070	0.41	-0.9
1,566,526	+		PGA1_c15070	0.41	-0.5
1,566,534	-		PGA1_c15070	0.42	+0.1
1,566,596	+		PGA1_c15070	0.50	-1.4
1,566,614	-		PGA1_c15070	0.52	-0.9
1,566,635	-		PGA1_c15070	0.54	-1.4
1,566,688	+		PGA1_c15070	0.61	+0.2
1,566,696	-		PGA1_c15070	0.62	+0.6
1,566,758	+		PGA1_c15070	0.69	-0.4
1,566,804	+		PGA1_c15070	0.74	-0.9
1,566,877	+		PGA1_c15070	0.83	-0.9
1,566,886	+		PGA1_c15070	0.84	+1.0
1,566,886	+		PGA1_c15070	0.84	-1.7
1,566,890	-		PGA1_c15070	0.85	-0.9
1,566,895	-		PGA1_c15070	0.85	-0.7
1,566,940	-				-0.8
1,566,946	+				-1.4
1,566,946	+				-2.4
1,566,951	+				-0.0
1,566,954	-				-0.3
1,567,022	+				-0.4
1,567,027	+				-0.0
1,567,027	+				+1.4
1,567,027	+				-1.0
1,567,027	+				-1.1
1,567,030	-				+0.1
1,567,035	-				+0.5
1,567,035	-				+0.5
1,567,117	+				-0.0
1,567,125	-				+1.8
1,567,162	-		PGA1_c15080	0.12	+0.9
1,567,176	+		PGA1_c15080	0.13	-0.0
1,567,238	-		PGA1_c15080	0.18	+1.1
1,567,268	+		PGA1_c15080	0.21	-0.3
1,567,269	+		PGA1_c15080	0.21	+0.4
1,567,274	+		PGA1_c15080	0.21	-0.6
1,567,277	-		PGA1_c15080	0.21	+0.7
1,567,291	-		PGA1_c15080	0.22	-1.0
1,567,323	+		PGA1_c15080	0.25	-0.5
1,567,326	-		PGA1_c15080	0.25	+0.6
1,567,344	+		PGA1_c15080	0.27	+1.9
1,567,356	-		PGA1_c15080	0.28	+0.3
1,567,375	-		PGA1_c15080	0.29	+1.3
1,567,398	+		PGA1_c15080	0.31	+0.5
1,567,398	+		PGA1_c15080	0.31	+0.1
1,567,398	+		PGA1_c15080	0.31	-3.2
1,567,406	-		PGA1_c15080	0.32	+0.3
1,567,467	+		PGA1_c15080	0.37	-0.7
1,567,485	+		PGA1_c15080	0.39	+0.7
1,567,485	+		PGA1_c15080	0.39	-0.1
1,567,487	+		PGA1_c15080	0.39	-0.5
1,567,495	-		PGA1_c15080	0.39	-0.8
1,567,498	+		PGA1_c15080	0.40	-0.2
1,567,530	+		PGA1_c15080	0.42	+1.4
1,567,538	-		PGA1_c15080	0.43	-2.3
1,567,553	+		PGA1_c15080	0.44	+0.8
1,567,563	+		PGA1_c15080	0.45	+0.8
1,567,563	+		PGA1_c15080	0.45	-0.9
1,567,700	+		PGA1_c15080	0.56	+0.5
1,567,702	-		PGA1_c15080	0.56	-0.6
1,567,715	-		PGA1_c15080	0.58	+0.5
1,567,715	-		PGA1_c15080	0.58	+0.8
1,567,715	-		PGA1_c15080	0.58	-2.5
1,567,775	-		PGA1_c15080	0.63	+2.1
1,567,789	-		PGA1_c15080	0.64	+0.7
1,567,813	+		PGA1_c15080	0.66	-0.2
1,567,827	+		PGA1_c15080	0.67	-1.0
1,567,827	+		PGA1_c15080	0.67	+1.0
1,567,827	+		PGA1_c15080	0.67	+0.7
1,567,827	+		PGA1_c15080	0.67	+0.4
1,567,835	-		PGA1_c15080	0.67	+0.2
1,567,835	-		PGA1_c15080	0.67	+1.4
1,567,835	-		PGA1_c15080	0.67	-0.9
1,567,893	+		PGA1_c15080	0.72	+0.9
1,567,955	-		PGA1_c15080	0.77	-1.6
1,567,985	+		PGA1_c15080	0.80	+0.4
1,567,986	+		PGA1_c15080	0.80	+1.1
1,567,986	+		PGA1_c15080	0.80	+0.3
1,567,994	-		PGA1_c15080	0.81	+1.5