Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c13770

Experiment: Carbon source L-Ornithine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source L-Ornithine 5 mM
1,421,087	+		PGA1_c13760	0.40	+0.4
1,421,095	-		PGA1_c13760	0.41	+0.0
1,421,095	-		PGA1_c13760	0.41	-1.3
1,421,136	+		PGA1_c13760	0.43	-1.7
1,421,146	+		PGA1_c13760	0.44	-1.2
1,421,146	+		PGA1_c13760	0.44	-0.7
1,421,187	-		PGA1_c13760	0.46	+1.9
1,421,205	+		PGA1_c13760	0.47	-0.5
1,421,208	-		PGA1_c13760	0.48	+0.3
1,421,221	-		PGA1_c13760	0.48	-1.3
1,421,229	-		PGA1_c13760	0.49	-2.1
1,421,273	-		PGA1_c13760	0.52	-0.0
1,421,273	-		PGA1_c13760	0.52	-0.1
1,421,292	+		PGA1_c13760	0.53	+0.3
1,421,305	-		PGA1_c13760	0.54	+1.1
1,421,317	+		PGA1_c13760	0.54	-2.1
1,421,325	-		PGA1_c13760	0.55	-1.7
1,421,367	-		PGA1_c13760	0.58	+0.9
1,421,381	+		PGA1_c13760	0.58	+0.3
1,421,381	+		PGA1_c13760	0.58	-0.5
1,421,381	+		PGA1_c13760	0.58	+1.8
1,421,381	+		PGA1_c13760	0.58	+0.5
1,421,381	+		PGA1_c13760	0.58	+1.0
1,421,381	+		PGA1_c13760	0.58	+0.7
1,421,389	-		PGA1_c13760	0.59	-0.1
1,421,389	-		PGA1_c13760	0.59	+0.1
1,421,389	-		PGA1_c13760	0.59	-1.0
1,421,389	-		PGA1_c13760	0.59	+1.0
1,421,389	-		PGA1_c13760	0.59	+0.7
1,421,389	-		PGA1_c13760	0.59	+0.4
1,421,396	+		PGA1_c13760	0.59	-0.4
1,421,396	+		PGA1_c13760	0.59	+1.5
1,421,396	+		PGA1_c13760	0.59	+0.7
1,421,396	+		PGA1_c13760	0.59	-0.4
1,421,404	-		PGA1_c13760	0.60	+0.2
1,421,404	-		PGA1_c13760	0.60	-0.1
1,421,422	-		PGA1_c13760	0.61	-0.4
1,421,486	-		PGA1_c13760	0.65	+0.1
1,421,489	+		PGA1_c13760	0.65	-1.4
1,421,520	+		PGA1_c13760	0.67	-2.8
1,421,535	+		PGA1_c13760	0.68	+0.5
1,421,541	-		PGA1_c13760	0.68	+0.9
1,421,563	+		PGA1_c13760	0.70	-0.0
1,421,621	+		PGA1_c13760	0.73	-0.1
1,421,631	-		PGA1_c13760	0.74	-1.4
1,421,633	+		PGA1_c13760	0.74	-0.3
1,421,638	+		PGA1_c13760	0.74	-0.4
1,421,641	-		PGA1_c13760	0.75	+0.3
1,421,641	-		PGA1_c13760	0.75	-1.5
1,421,651	-		PGA1_c13760	0.75	+0.9
1,421,656	+		PGA1_c13760	0.76	+1.1
1,421,656	-		PGA1_c13760	0.76	+1.8
1,421,666	-		PGA1_c13760	0.76	-1.9
1,421,679	-		PGA1_c13760	0.77	+0.2
1,421,715	+		PGA1_c13760	0.79	+0.4
1,421,722	-		PGA1_c13760	0.80	-0.8
1,421,753	+		PGA1_c13760	0.82	-1.0
1,421,761	-		PGA1_c13760	0.82	+0.5
1,421,818	+		PGA1_c13760	0.86	-1.7
1,421,926	+				+0.7
1,421,954	+				-2.6
1,422,033	+				+0.2
1,422,041	-				+0.5
1,422,049	+				+0.1
1,422,049	+				+2.6
1,422,147	+				-0.3
1,422,164	+				-0.5
1,422,180	-				-0.7
1,422,212	+		PGA1_c13770	0.12	+0.4
1,422,220	-		PGA1_c13770	0.13	+1.0
1,422,344	-		PGA1_c13770	0.22	+0.2
1,422,378	-		PGA1_c13770	0.25	-1.2
1,422,395	-		PGA1_c13770	0.26	+1.1
1,422,437	+		PGA1_c13770	0.29	+1.0
1,422,469	+		PGA1_c13770	0.31	+0.8
1,422,516	+		PGA1_c13770	0.35	+0.2
1,422,527	+		PGA1_c13770	0.35	-2.0
1,422,626	+		PGA1_c13770	0.43	-1.0
1,422,669	+		PGA1_c13770	0.46	-1.0
1,422,679	+		PGA1_c13770	0.47	-0.8
1,422,679	+		PGA1_c13770	0.47	-0.4
1,422,697	-		PGA1_c13770	0.48	+1.4
1,422,702	-		PGA1_c13770	0.48	-0.2
1,422,734	+		PGA1_c13770	0.51	-2.8
1,422,742	-		PGA1_c13770	0.51	-0.7
1,422,763	-		PGA1_c13770	0.53	-1.9
1,422,822	-		PGA1_c13770	0.57	+0.7
1,422,824	+		PGA1_c13770	0.57	+0.2
1,422,928	-		PGA1_c13770	0.65	+0.2
1,422,936	-		PGA1_c13770	0.66	-1.4
1,422,946	-		PGA1_c13770	0.66	-0.1
1,422,955	+		PGA1_c13770	0.67	+0.4
1,423,063	+		PGA1_c13770	0.75	+1.2
1,423,134	+		PGA1_c13770	0.80	+0.8
1,423,142	-		PGA1_c13770	0.81	-0.5
1,423,151	+		PGA1_c13770	0.81	-0.5
1,423,151	+		PGA1_c13770	0.81	+1.2
1,423,173	-		PGA1_c13770	0.83	+1.0
1,423,185	-		PGA1_c13770	0.84	-0.8
1,423,214	+		PGA1_c13770	0.86	-1.2
1,423,222	-		PGA1_c13770	0.87	+1.2
1,423,222	-		PGA1_c13770	0.87	+0.6
1,423,224	-		PGA1_c13770	0.87	-0.0
1,423,261	+		PGA1_c13770	0.89	+1.9
1,423,293	+				-1.8
1,423,321	+				-1.1
1,423,366	-				+0.3
1,423,393	+				+1.4
1,423,404	+				+0.4
1,423,461	+				+0.8
1,423,505	+				-0.6
1,423,508	-				+0.2
1,423,513	-				-0.7
1,423,513	-				+0.2
1,423,515	+				+0.9
1,423,515	+				-0.7
1,423,515	+				-0.5
1,423,515	+				-1.7
1,423,515	+				-0.4
1,423,515	+				+1.1
1,423,515	+				+0.9
1,423,518	-				-2.9
1,423,523	-				+1.2
1,423,523	-				+0.2
1,423,523	-				-1.5
1,423,523	-				-0.5
1,423,523	-				-0.1
1,423,523	-				-1.5
1,423,523	-				+0.4
1,423,523	-				+0.3
1,423,523	-				-0.8
1,423,523	-				+0.4
1,423,523	-				+0.1
1,423,523	-				+0.6
1,423,523	-				-0.6
1,423,554	+				-1.8
1,423,597	+				-1.1
1,423,643	+		PGA1_c13780	0.13	-0.8
1,423,679	-		PGA1_c13780	0.15	-0.5
1,423,697	-		PGA1_c13780	0.16	-0.5
1,423,697	-		PGA1_c13780	0.16	+0.3
1,423,710	-		PGA1_c13780	0.17	-2.0
1,423,787	+		PGA1_c13780	0.22	+0.2
1,423,871	+		PGA1_c13780	0.27	+1.1
1,423,896	+		PGA1_c13780	0.29	-0.5
1,423,904	-		PGA1_c13780	0.29	+1.0
1,423,926	+		PGA1_c13780	0.31	-0.2
1,423,934	+		PGA1_c13780	0.31	+0.3
1,423,947	+		PGA1_c13780	0.32	-0.7
1,423,968	-		PGA1_c13780	0.33	+0.7
1,423,983	+		PGA1_c13780	0.34	+1.2
1,423,988	+		PGA1_c13780	0.35	-2.5
1,423,996	-		PGA1_c13780	0.35	+0.6
1,424,018	-		PGA1_c13780	0.36	-0.1
1,424,025	+		PGA1_c13780	0.37	+0.2
1,424,025	+		PGA1_c13780	0.37	-2.1
1,424,037	+		PGA1_c13780	0.38	-0.7
1,424,045	-		PGA1_c13780	0.38	+0.4
1,424,045	-		PGA1_c13780	0.38	+0.0
1,424,047	+		PGA1_c13780	0.38	-2.3
1,424,065	-		PGA1_c13780	0.39	-0.5
1,424,096	-		PGA1_c13780	0.41	-0.4
1,424,096	-		PGA1_c13780	0.41	-0.5
1,424,096	-		PGA1_c13780	0.41	+0.1
1,424,122	-		PGA1_c13780	0.43	-1.0
1,424,124	+		PGA1_c13780	0.43	+1.3
1,424,124	+		PGA1_c13780	0.43	+0.0
1,424,137	-		PGA1_c13780	0.44	+0.8
1,424,147	-		PGA1_c13780	0.45	-2.3
1,424,168	-		PGA1_c13780	0.46	-0.6
1,424,179	+		PGA1_c13780	0.47	+0.8
1,424,184	+		PGA1_c13780	0.47	+0.3
1,424,197	-		PGA1_c13780	0.48	+0.2
1,424,266	+		PGA1_c13780	0.52	+0.4
1,424,284	-		PGA1_c13780	0.53	-0.1
1,424,284	-		PGA1_c13780	0.53	-1.4
1,424,304	-		PGA1_c13780	0.55	-0.7
1,424,304	-		PGA1_c13780	0.55	-1.1
1,424,313	+		PGA1_c13780	0.55	+0.4
1,424,313	+		PGA1_c13780	0.55	+0.2
1,424,313	+		PGA1_c13780	0.55	-0.1
1,424,318	+		PGA1_c13780	0.56	-0.1
1,424,321	-		PGA1_c13780	0.56	+0.6
1,424,337	-		PGA1_c13780	0.57	+0.3
1,424,344	-		PGA1_c13780	0.57	+0.6