Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c11990

Experiment: Carbon source L-Ornithine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source L-Ornithine 5 mM
1,244,990	-		PGA1_c11980	0.13	+0.6
1,245,048	-		PGA1_c11980	0.18	+2.1
1,245,048	-		PGA1_c11980	0.18	+2.1
1,245,099	-		PGA1_c11980	0.23	+2.1
1,245,119	-		PGA1_c11980	0.25	+2.1
1,245,263	-		PGA1_c11980	0.40	+1.1
1,245,288	+		PGA1_c11980	0.42	+1.1
1,245,296	-		PGA1_c11980	0.43	+2.1
1,245,374	+		PGA1_c11980	0.51	+0.6
1,245,399	-		PGA1_c11980	0.53	+1.1
1,245,430	-		PGA1_c11980	0.56	+1.1
1,245,472	-		PGA1_c11980	0.60	+1.1
1,245,481	-		PGA1_c11980	0.61	+0.1
1,245,533	+		PGA1_c11980	0.66	+1.1
1,245,541	-		PGA1_c11980	0.67	+2.1
1,245,551	-		PGA1_c11980	0.68	+0.6
1,245,551	-		PGA1_c11980	0.68	+2.1
1,245,763	+		PGA1_c11980	0.89	+0.6
1,245,771	-		PGA1_c11980	0.90	+1.1
1,245,771	-		PGA1_c11980	0.90	+2.1
1,245,771	-		PGA1_c11980	0.90	+2.1
1,245,789	+				+1.1
1,245,821	+				+1.0
1,245,826	+				+2.1
1,245,839	+				+2.1
1,245,839	+				+0.6
1,245,839	+				-0.2
1,245,887	+				+2.1
1,245,895	-				-0.7
1,245,946	+				-2.7
1,245,966	+				-2.7
1,245,994	+				-0.7
1,246,002	-				-0.1
1,246,002	-				-2.9
1,246,002	-				-0.1
1,246,078	-				+0.2
1,246,128	+				+0.4
1,246,135	+				-0.3
1,246,210	-		PGA1_c11990	0.14	-2.8
1,246,215	+		PGA1_c11990	0.14	-0.4
1,246,215	+		PGA1_c11990	0.14	+1.5
1,246,215	+		PGA1_c11990	0.14	-2.3
1,246,215	+		PGA1_c11990	0.14	+0.9
1,246,223	-		PGA1_c11990	0.14	-1.4
1,246,223	-		PGA1_c11990	0.14	+0.0
1,246,243	+		PGA1_c11990	0.16	+0.7
1,246,251	-		PGA1_c11990	0.16	+0.7
1,246,356	+		PGA1_c11990	0.23	-0.4
1,246,395	-		PGA1_c11990	0.25	+0.6
1,246,395	-		PGA1_c11990	0.25	+0.5
1,246,452	-		PGA1_c11990	0.29	-0.5
1,246,532	-		PGA1_c11990	0.33	-0.6
1,246,565	+		PGA1_c11990	0.35	+0.8
1,246,602	-		PGA1_c11990	0.38	-0.3
1,246,627	+		PGA1_c11990	0.39	-0.6
1,246,627	+		PGA1_c11990	0.39	-0.7
1,246,627	+		PGA1_c11990	0.39	-0.9
1,246,635	-		PGA1_c11990	0.40	+2.5
1,246,635	-		PGA1_c11990	0.40	+0.8
1,246,635	-		PGA1_c11990	0.40	+1.2
1,246,635	-		PGA1_c11990	0.40	-0.7
1,246,663	+		PGA1_c11990	0.41	-0.3
1,246,665	-		PGA1_c11990	0.42	+1.6
1,246,671	-		PGA1_c11990	0.42	+0.3
1,246,687	+		PGA1_c11990	0.43	+0.1
1,246,707	+		PGA1_c11990	0.44	+0.5
1,246,715	-		PGA1_c11990	0.45	-0.5
1,246,715	-		PGA1_c11990	0.45	-0.9
1,246,750	+		PGA1_c11990	0.47	+0.0
1,246,819	+		PGA1_c11990	0.51	-0.1
1,246,874	-		PGA1_c11990	0.54	+1.4
1,246,978	+		PGA1_c11990	0.61	-1.0
1,246,978	+		PGA1_c11990	0.61	-0.1
1,247,014	+		PGA1_c11990	0.63	+0.4
1,247,014	+		PGA1_c11990	0.63	-0.7
1,247,014	+		PGA1_c11990	0.63	+0.3
1,247,041	+		PGA1_c11990	0.65	+0.3
1,247,041	+		PGA1_c11990	0.65	-1.2
1,247,059	-		PGA1_c11990	0.66	-0.0
1,247,078	+		PGA1_c11990	0.67	+0.3
1,247,086	-		PGA1_c11990	0.67	-1.4
1,247,121	-		PGA1_c11990	0.70	+1.5
1,247,143	+		PGA1_c11990	0.71	-0.9
1,247,143	+		PGA1_c11990	0.71	+0.7
1,247,149	+		PGA1_c11990	0.71	-0.2
1,247,157	-		PGA1_c11990	0.72	-0.4
1,247,217	-		PGA1_c11990	0.76	+0.7
1,247,217	-		PGA1_c11990	0.76	-2.1
1,247,238	-		PGA1_c11990	0.77	+1.1
1,247,238	-		PGA1_c11990	0.77	-0.2
1,247,242	+		PGA1_c11990	0.77	+0.3
1,247,250	-		PGA1_c11990	0.78	+0.8
1,247,255	-		PGA1_c11990	0.78	+0.1
1,247,322	+		PGA1_c11990	0.82	+0.1
1,247,322	+		PGA1_c11990	0.82	-0.9
1,247,330	-		PGA1_c11990	0.82	-0.4
1,247,330	-		PGA1_c11990	0.82	+0.9
1,247,330	-		PGA1_c11990	0.82	-0.8
1,247,427	+		PGA1_c11990	0.88	-2.8
1,247,444	+		PGA1_c11990	0.89	-1.0
1,247,491	+				+1.6
1,247,504	-				-1.7
1,247,543	-				+1.1
1,247,583	+				+0.4
1,247,596	-				+1.3
1,247,793	-				-1.3
1,247,860	-		PGA1_c12000	0.11	-1.2
1,247,881	-		PGA1_c12000	0.14	+0.6
1,247,913	-		PGA1_c12000	0.19	+0.4
1,247,915	-		PGA1_c12000	0.19	+0.2
1,247,941	-		PGA1_c12000	0.23	-1.4
1,247,949	+		PGA1_c12000	0.24	-0.7
1,248,014	+		PGA1_c12000	0.34	-1.1
1,248,017	-		PGA1_c12000	0.35	+0.8
1,248,039	-		PGA1_c12000	0.38	+0.3
1,248,039	-		PGA1_c12000	0.38	-0.7
1,248,039	-		PGA1_c12000	0.38	-0.7
1,248,076	+		PGA1_c12000	0.43	-2.2
1,248,076	+		PGA1_c12000	0.43	-0.6
1,248,084	-		PGA1_c12000	0.45	+0.3
1,248,105	-		PGA1_c12000	0.48	-0.6
1,248,105	-		PGA1_c12000	0.48	-1.8
1,248,107	+		PGA1_c12000	0.48	+0.2
1,248,107	+		PGA1_c12000	0.48	+1.0
1,248,107	+		PGA1_c12000	0.48	-1.2
1,248,115	-		PGA1_c12000	0.49	-0.2
1,248,115	-		PGA1_c12000	0.49	+1.7
1,248,207	-		PGA1_c12000	0.63	+0.7
1,248,207	-		PGA1_c12000	0.63	-1.8
1,248,207	-		PGA1_c12000	0.63	+1.1
1,248,209	-		PGA1_c12000	0.63	-0.7
1,248,220	+		PGA1_c12000	0.65	+1.2
1,248,228	-		PGA1_c12000	0.66	+0.4
1,248,228	-		PGA1_c12000	0.66	+0.2
1,248,230	+		PGA1_c12000	0.67	+0.4
1,248,246	-		PGA1_c12000	0.69	-0.2
1,248,295	+		PGA1_c12000	0.76	+0.9
1,248,354	+		PGA1_c12000	0.85	-0.4
1,248,376	+		PGA1_c12000	0.88	-0.2
1,248,384	+		PGA1_c12000	0.90	-0.8
1,248,384	+		PGA1_c12000	0.90	-0.5
1,248,384	+		PGA1_c12000	0.90	-0.1
1,248,384	+		PGA1_c12000	0.90	-0.4
1,248,394	+				-0.0
1,248,397	+				+1.2
1,248,402	-				-0.5
1,248,402	-				-0.9
1,248,402	-				+0.5
1,248,403	+				-1.4
1,248,403	+				-0.3
1,248,457	-				+0.3
1,248,502	+				+1.7
1,248,510	-				-0.8
1,248,593	-				+0.4
1,248,595	+				+0.0